Ggra5492.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5492.t1
Unique NameGgra5492.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length211
Homology
BLAST of Ggra5492.t1 vs. uniprot
Match: A0A2V3J0T6 (60S ribosomal protein L13-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0T6_9FLOR)

HSP 1 Score: 352 bits (903), Expect = 1.010e-121
Identity = 179/210 (85.24%), Postives = 195/210 (92.86%), Query Frame = 0
Query:    1 MKHNNVIPNIHFHKEWDTRVRTWFDQPMRKRRRRRARTIKAAKLAPRPIDGPLRPIVTCTTNKYNMRVRLGRGFSVEELKEAGIPFKFAPTIGIAVDPRRKNRSVDSMQENVQRLKEYKSKLILFPKNAAKPKAGEATKEDLAVAAQLAGKLMPIQPKSSSVEVRPITNDDRAKYAYRSLRIERTNQKYDGLRKKRAAQKAAEEAEKAKK 210
            MKHNNVIPNIHFHK+WDTRVRTWF+QPMRKRRRRRAR +KAAK APRP+DGPLRPIV C TNKYNMR+RLGRGFS+EELKEAGIPFK APTIGIAVD RRKNRSVD+MQ+NVQRLKEY+SKLILFPKN AKPKAGEATK+DLAVAAQL  KLMPI  K  ++EVR ITN+DRAKYAYRSLRIERTNQKY+G+RKKRAA+KAA EAEKAKK
Sbjct:    1 MKHNNVIPNIHFHKDWDTRVRTWFNQPMRKRRRRRARNLKAAKSAPRPVDGPLRPIVHCPTNKYNMRLRLGRGFSIEELKEAGIPFKLAPTIGIAVDQRRKNRSVDAMQDNVQRLKEYRSKLILFPKNPAKPKAGEATKDDLAVAAQLTDKLMPIPSKKPTIEVRTITNEDRAKYAYRSLRIERTNQKYEGIRKKRAAEKAAAEAEKAKK 210          
BLAST of Ggra5492.t1 vs. uniprot
Match: R7Q712 (60S ribosomal protein L13 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q712_CHOCR)

HSP 1 Score: 315 bits (806), Expect = 6.470e-107
Identity = 160/207 (77.29%), Postives = 184/207 (88.89%), Query Frame = 0
Query:    1 MKHNNVIPNIHFHKEWDTRVRTWFDQPMRKRRRRRARTIKAAKLAPRPIDGPLRPIVTCTTNKYNMRVRLGRGFSVEELKEAGIPFKFAPTIGIAVDPRRKNRSVDSMQENVQRLKEYKSKLILFPKNAAKPKAGEATKEDLAVAAQLAGKLMPIQPKSSSVEVRPITNDDRAKYAYRSLRIERTNQKYDGLRKKRAAQKAAEEAEK 207
            MKHNNVIPN HF KEW  RVRTWF+QPMRKRRRR AR +K AK APRPIDG LRPIV C TNKYNM VRLGRGFS+EELKEAGI  ++APTIGIAVDPRRKNRS+D+MQ+NVQRLKE+K+KLI+FPKN AKPK GEA KE+LA+AAQL GKLMPIQ  ++ +EVRPITNDDRAK AYRSLRIE++N+K +G+RKKRAA+KAAE+A+K
Sbjct:    1 MKHNNVIPNNHFRKEWQLRVRTWFEQPMRKRRRRSARVLKYAKSAPRPIDGLLRPIVRCPTNKYNMHVRLGRGFSLEELKEAGIAVRYAPTIGIAVDPRRKNRSLDAMQDNVQRLKEFKTKLIVFPKNPAKPKEGEAKKEELAMAAQLEGKLMPIQKTTAEIEVRPITNDDRAKTAYRSLRIEKSNKKLEGIRKKRAAEKAAEKADK 207          
BLAST of Ggra5492.t1 vs. uniprot
Match: A0A7S0T5W9 (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T5W9_9RHOD)

HSP 1 Score: 262 bits (669), Expect = 4.110e-86
Identity = 131/207 (63.29%), Postives = 161/207 (77.78%), Query Frame = 0
Query:    1 MKHNNVIPNIHFHKEWDTRVRTWFDQPMRKRRRRRARTIKAAKLAPRPIDGPLRPIVTCTTNKYNMRVRLGRGFSVEELKEAGIPFKFAPTIGIAVDPRRKNRSVDSMQENVQRLKEYKSKLILFPKNAAKPKAGEATKEDLAVAAQLAGKLMPIQPKSSSVEVRPITNDDRAKYAYRSLRIERTNQKYDGLRKKRAAQKAAEEAEK 207
            MKHNN++PN HFHKEW  RVRTWF+QPMRK+RRR AR +KAA++APRP+DG LRP+V C T KYNM+ RLGRGF++EELKEA +P K A T+GIAVD RRKNRSV+  Q NVQRLKEYKS+LI+FPK A KPKAG++   +LA A Q AGKLMPI     ++E R IT +++    Y  LR+ER N K+DG+RKK AA+ AA E +K
Sbjct:    1 MKHNNMVPNAHFHKEWQLRVRTWFNQPMRKKRRRTARQLKAARIAPRPVDGALRPVVQCPTVKYNMKQRLGRGFTLEELKEAEMPKKLAGTVGIAVDHRRKNRSVEGFQRNVQRLKEYKSRLIVFPKRAGKPKAGDSDASELATATQFAGKLMPIVGVEGAIEARAITEEEKQTRVYAKLRLERANAKHDGMRKKLAAEAAAAEEDK 207          
BLAST of Ggra5492.t1 vs. uniprot
Match: A0A7S1EQE0 (60S ribosomal protein L13 n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EQE0_9RHOD)

HSP 1 Score: 249 bits (637), Expect = 2.630e-81
Identity = 127/204 (62.25%), Postives = 158/204 (77.45%), Query Frame = 0
Query:    1 MKHNNVIPNIHFHKEWDTRVRTWFDQPMRKRRRRRARTIKAAKLAPRPIDGPLRPIVTCTTNKYNMRVRLGRGFSVEELKEAGIPFKFAPTIGIAVDPRRKNRSVDSMQENVQRLKEYKSKLILFPKNAAKPKAGEATKEDLAVAAQLAGKLMPIQPKSSSVEVRPITNDDRAKYAYRSLRIERTNQKYDGLRKKRAAQKAAEE 204
            MKHNNV+PN HFHKEW  RVRTWF+QPMRK+RRR  R +KAA++APRP+DG LRP+V C T KYNM+ RLGRGF++EELKEAG+  K A TIGIAVD RRKNRSV+S Q+NVQRLKEYKS+LI+FPK   K K+G++   DL  A QL GKLMP    SS++E R +T+++++   Y  L  ER N + +G+RKK AA+KAA E
Sbjct:    1 MKHNNVVPNAHFHKEWQLRVRTWFNQPMRKKRRRTQRQMKAARVAPRPVDGMLRPVVHCPTVKYNMKERLGRGFTLEELKEAGVLRKMAKTIGIAVDHRRKNRSVESFQQNVQRLKEYKSRLIVFPKRVGKAKSGDSDAADLTTATQLTGKLMPPVKASSTLEARAVTDEEKSSSVYAKLCTERMNVRNEGMRKKVAAEKAAAE 204          
BLAST of Ggra5492.t1 vs. uniprot
Match: A0A061SBD4 (60S ribosomal protein L13 n=4 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SBD4_9CHLO)

HSP 1 Score: 242 bits (618), Expect = 2.400e-78
Identity = 125/204 (61.27%), Postives = 156/204 (76.47%), Query Frame = 0
Query:    1 MKHNNVIPNIHFHKEWDTRVRTWFDQPMRKRRRRRARTIKAAKLAPRPIDGPLRPIVTCTTNKYNMRVRLGRGFSVEELKEAGIPFKFAPTIGIAVDPRRKNRSVDSMQENVQRLKEYKSKLILFPKNAAKPKAGEATKEDLAVAAQLAGKLMPIQPKSSSVEVRPITNDDRAKYAYRSLRIERTNQKYDGLRKKRAAQKAAEE 204
            MKHNNVIPN HF K+W   V+TWF+QP RK RRR AR  KA K+ PRP+DGPLRP V C T +YNM+ RLGRGFS+EELKEAGI  K APTIGIAVD RR+N+S+++MQENV RLK YKS L++FP+   KPKAG+A+ E+L  A+QL GKLMPI+   + +E   IT++ +   AY  LR+ER N++ +G+RKKRA QKA EE
Sbjct:    1 MKHNNVIPNGHFKKKWQNYVKTWFNQPARKIRRRNARAEKARKVFPRPVDGPLRPAVRCQTVRYNMKQRLGRGFSLEELKEAGISKKVAPTIGIAVDHRRRNKSLEAMQENVNRLKAYKSNLMIFPRRQNKPKAGDASAEELKTASQLTGKLMPIKATKAPMEYMAITDEMKGFNAYAQLRLERMNKRLEGIRKKRAEQKAQEE 204          
BLAST of Ggra5492.t1 vs. uniprot
Match: A7S405 (60S ribosomal protein L13 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7S405_NEMVE)

HSP 1 Score: 242 bits (618), Expect = 2.480e-78
Identity = 127/208 (61.06%), Postives = 157/208 (75.48%), Query Frame = 0
Query:    2 KHNNVIPNIHFHKEWDTRVRTWFDQPMRKRRRRRARTIKAAKLAPRPIDGPLRPIVTCTTNKYNMRVRLGRGFSVEELKEAGIPFKFAPTIGIAVDPRRKNRSVDSMQENVQRLKEYKSKLILFPKNAAKPKAGEATKEDLAVAAQLAGKLMPIQPKSSSVEVRPITNDDRAKYAYRSLRIERTNQKYDGLRKKRAAQKAAEEAEKAK 209
            K NN+IPN HFHK+W   V+TWFDQP RK+RRR AR  KAAK+APRP+ G LRPIV C T KYN +VR GRGF+++ELK AGIP K APTIGIAVD RRKNRS +S+Q NVQRLKEYKSKLI+FP+ A KPK G++   DLA A QL G +MPI  +S  ++ RPIT D++    ++++RIER N +  G+R+KRA +KA  EA K K
Sbjct:    4 KRNNIIPNGHFHKDWQRYVKTWFDQPGRKKRRRVARQTKAAKIAPRPVAGSLRPIVRCPTFKYNTKVRAGRGFTLDELKAAGIPRKVAPTIGIAVDHRRKNRSAESLQANVQRLKEYKSKLIVFPRKANKPKQGDSEAADLANAVQLQGPVMPIPQESVPIKARPITEDEKKFSVFKTMRIERANARLIGIREKRAKEKAEAEAMKKK 211          
BLAST of Ggra5492.t1 vs. uniprot
Match: A0A5J4YKD5 (60S ribosomal protein L13 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YKD5_PORPP)

HSP 1 Score: 239 bits (610), Expect = 3.810e-77
Identity = 121/203 (59.61%), Postives = 153/203 (75.37%), Query Frame = 0
Query:    2 KHNNVIPNIHFHKEWDTRVRTWFDQPMRKRRRRRARTIKAAKLAPRPIDGPLRPIVTCTTNKYNMRVRLGRGFSVEELKEAGIPFKFAPTIGIAVDPRRKNRSVDSMQENVQRLKEYKSKLILFPKNAAKPKAGEATKEDLAVAAQLAGKLMPIQPKSSSVEVRPITNDDRAKYAYRSLRIERTNQKYDGLRKKRAAQKAAEE 204
            KHNN+IPN HF KEW  RV+TWF+QPMRK+RRR  R  KAA++APRP+DG +RP+V C T KYN + RLGRGF++EELKEAG+  K A TIGI+VD RRKNRSV+  Q+NVQRLKEYKSKLI+FPK A KPK G++   +LA A+Q  GKLMPI     + E R IT +++   AY  +R ER N +++G+RKKRA +K  E+
Sbjct:    3 KHNNMIPNNHFKKEWQLRVKTWFNQPMRKKRRRTTRQTKAARIAPRPVDGMVRPVVRCPTVKYNQKERLGRGFTLEELKEAGVARKMAKTIGISVDHRRKNRSVEGFQQNVQRLKEYKSKLIIFPKRAGKPKTGDSEPAELATASQFTGKLMPIVRSKDAPESRAITAEEKDFKAYAQIRQERANVRWEGIRKKRALEKEDED 205          
BLAST of Ggra5492.t1 vs. uniprot
Match: A0A7S1T839 (60S ribosomal protein L13 n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T839_9CHLO)

HSP 1 Score: 238 bits (607), Expect = 1.090e-76
Identity = 123/204 (60.29%), Postives = 156/204 (76.47%), Query Frame = 0
Query:    1 MKHNNVIPNIHFHKEWDTRVRTWFDQPMRKRRRRRARTIKAAKLAPRPIDGPLRPIVTCTTNKYNMRVRLGRGFSVEELKEAGIPFKFAPTIGIAVDPRRKNRSVDSMQENVQRLKEYKSKLILFPKNAAKPKAGEATKEDLAVAAQLAGKLMPIQPKSSSVEVRPITNDDRAKYAYRSLRIERTNQKYDGLRKKRAAQKAAEE 204
            MKHNNVIPN HF K+W   VRTWF+QP RK RRR AR  KA K+ PRP+DG LRP+V   + +YNM+VRLGRGF++EELKEAGI  K APTIGIAVD RR+N+S++ MQENV RLK YKS L++FPK A KPKAG+A+ E+L  A+QL GKLMP++ +++ +E   IT++ +   AY  LR+ER N +  G+RKKRA +KA EE
Sbjct:    1 MKHNNVIPNGHFKKKWQFYVRTWFNQPARKIRRRNARAAKAEKVFPRPVDGALRPVVHSQSQRYNMKVRLGRGFTLEELKEAGISAKLAPTIGIAVDHRRRNKSLEGMQENVNRLKSYKSNLVVFPKRANKPKAGDASAEELKTASQLTGKLMPVKKEAAPLEFVTITSEMKDTPAYGKLRLERMNARMAGIRKKRADEKAKEE 204          
BLAST of Ggra5492.t1 vs. uniprot
Match: A0A6P8I3C7 (60S ribosomal protein L13 n=2 Tax=Actiniaria TaxID=6103 RepID=A0A6P8I3C7_ACTTE)

HSP 1 Score: 237 bits (604), Expect = 3.320e-76
Identity = 122/208 (58.65%), Postives = 157/208 (75.48%), Query Frame = 0
Query:    2 KHNNVIPNIHFHKEWDTRVRTWFDQPMRKRRRRRARTIKAAKLAPRPIDGPLRPIVTCTTNKYNMRVRLGRGFSVEELKEAGIPFKFAPTIGIAVDPRRKNRSVDSMQENVQRLKEYKSKLILFPKNAAKPKAGEATKEDLAVAAQLAGKLMPIQPKSSSVEVRPITNDDRAKYAYRSLRIERTNQKYDGLRKKRAAQKAAEEAEKAK 209
            K NNVIPN HFHK+W   V+TWF+QP RK+RRR AR  KA K+APRP+ G +RPIV C T KYN ++R GRGF+++ELK AGIP K A TIGIAVD RRKNRS +S+Q NVQRLKEYKSKLI+FP+ A KPK G++   DL  A QL G++MPIQ  S  ++ RPIT++++    ++++RIER+N +  G+R+KRA +KA  EA K K
Sbjct:    4 KRNNVIPNAHFHKDWQRYVKTWFNQPGRKKRRRTARKEKAIKIAPRPVAGAIRPIVRCPTFKYNTKIRAGRGFTLDELKAAGIPRKVAQTIGIAVDHRRKNRSTESLQANVQRLKEYKSKLIIFPRKAGKPKQGDSEAADLENAVQLQGEVMPIQQPSVQIKARPITDEEKKFSVFKTMRIERSNARLIGIREKRAKEKAEAEAMKKK 211          
BLAST of Ggra5492.t1 vs. uniprot
Match: M2XZW1 (60S ribosomal protein L13e n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XZW1_GALSU)

HSP 1 Score: 234 bits (598), Expect = 2.530e-75
Identity = 123/204 (60.29%), Postives = 159/204 (77.94%), Query Frame = 0
Query:    1 MKHNNVIPNIHFHKEWDTRVRTWFDQPMRKRRRRRARTIKAAKLAPRPIDGPLRPIVTCTTNKYNMRVRLGRGFSVEELKEAGIPFKFAPTIGIAVDPRRKNRSVDSMQENVQRLKEYKSKLILFPKNAAKPKAGEATKEDLAVAAQLAGKLMPIQPKSS-SVEVRPITNDDRAKYAYRSLRIERTNQKYDGLRKKRAAQKAAE 203
            ++HNNV+PN HFHK+W  RV+TWF+QPMRK+RRR AR  KAA+LAPRP  GPLRPIV C T KYNM VRLGRGF++EELKEA I  +FA TIGI+VD RRKNRSV+S+Q NVQRLKEY S+LILFP+   KPK+G++   +LA+A Q+ G ++PIQ  +S SVE R +T ++R+K AY++LR+ R   K  G +KK+  ++A E
Sbjct:    2 VRHNNVVPNGHFHKDWQRRVKTWFNQPMRKKRRRLARQKKAARLAPRPAKGPLRPIVHCPTVKYNMNVRLGRGFTLEELKEAKINPQFARTIGISVDRRRKNRSVESLQTNVQRLKEYLSRLILFPRRHGKPKSGDSDPSELAMAKQVFGDVLPIQSTTSTSVETRTVTEEERSKSAYQTLRVARKQAKNIGKQKKKEKEQAEE 205          
The following BLAST results are available for this feature:
BLAST of Ggra5492.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J0T61.010e-12185.2460S ribosomal protein L13-2 n=1 Tax=Gracilariopsis... [more]
R7Q7126.470e-10777.2960S ribosomal protein L13 n=1 Tax=Chondrus crispus... [more]
A0A7S0T5W94.110e-8663.29Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A7S1EQE02.630e-8162.2560S ribosomal protein L13 n=1 Tax=Timspurckia olig... [more]
A0A061SBD42.400e-7861.2760S ribosomal protein L13 n=4 Tax=Tetraselmis sp. ... [more]
A7S4052.480e-7861.0660S ribosomal protein L13 n=1 Tax=Nematostella vec... [more]
A0A5J4YKD53.810e-7759.6160S ribosomal protein L13 n=1 Tax=Porphyridium pur... [more]
A0A7S1T8391.090e-7660.2960S ribosomal protein L13 n=1 Tax=Tetraselmis chui... [more]
A0A6P8I3C73.320e-7658.6560S ribosomal protein L13 n=2 Tax=Actiniaria TaxID... [more]
M2XZW12.530e-7560.2960S ribosomal protein L13e n=1 Tax=Galdieria sulph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 182..210
NoneNo IPR availableGENE3D1.20.5.110coord: 164..209
e-value: 1.3E-9
score: 40.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..210
NoneNo IPR availablePANTHERPTHR11722:SF060S RIBOSOMAL PROTEIN L13coord: 1..207
IPR001380Ribosomal protein L13ePFAMPF01294Ribosomal_L13ecoord: 6..184
e-value: 3.1E-75
score: 252.0
IPR001380Ribosomal protein L13ePANTHERPTHR1172260S RIBOSOMAL PROTEIN L13coord: 1..207
IPR001380Ribosomal protein L13eHAMAPMF_00499Ribosomal_L13ecoord: 44..127
score: 21.431305
IPR018256Ribosomal protein L13e, conserved sitePROSITEPS01104RIBOSOMAL_L13Ecoord: 69..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:454087..454719 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5492.t1Ggra5492.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 454087..454719 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5492.t1 ID=Ggra5492.t1|Name=Ggra5492.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=211bp
MKHNNVIPNIHFHKEWDTRVRTWFDQPMRKRRRRRARTIKAAKLAPRPID
GPLRPIVTCTTNKYNMRVRLGRGFSVEELKEAGIPFKFAPTIGIAVDPRR
KNRSVDSMQENVQRLKEYKSKLILFPKNAAKPKAGEATKEDLAVAAQLAG
KLMPIQPKSSSVEVRPITNDDRAKYAYRSLRIERTNQKYDGLRKKRAAQK
AAEEAEKAKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001380Ribosomal_L13e
IPR018256Ribosomal_L13e_CS