Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra10239.t1.start1 | Ggra10239.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000016_pilon 185273..185275 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra10239.t1.stop1 | Ggra10239.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000016_pilon 186944..186946 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra10239.t1 ID=Ggra10239.t1|Name=Ggra10239.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=558bp
MLIGLVHGSERLEKPFSLTSIAHVKKAIENLRMKDKNAVPDKNASMWNLD
FLKHIAEMKDLSEKTIQTELSSSPETRTKSLADNPEGATDKKESAEEKAK
GGDNPSLARMLKELVKSVTDASQKRSSHSSIRIGEADIPIEKVTAVGDVD
GNGFEDYIVANPSSKNGTGTIRLYLMTADSKFLYTRDLVPGRYGFVSSPL
AEGDRFGDSVEKITSDTPNFSFVTVTAPGDRSVAGGKGAFYILQLSDKGN
VINSAKLSAKTIETVVARSANGDESKYSANLNRSILSKKIVDILSNKTSM
LLVRKGGEIKGAYVISSAEDHKMLQDIEQKMTPRKRLASLRLESPLVRAD
ISSNCFFNDTHCACASNAPPAGSGQCTQVIGTEQSSGKTLCQTRDCMASY
SCMCEGIQLCARSERTLTSYTVEGAAPGGNMYCNSVQKTITENVVIAGAE
VPVILSVNDLPPYNATHCRCAQKQSVTGTAICLDVVRALSGVNYVCSERN
CRIGAGEYICDAFGDSYCSRSFEEKMHYVKDGEKTDEAGAVFCHREAYQA
ESVTKIL* back to topspliced messenger RNA >Ggra10239.t1 ID=Ggra10239.t1|Name=Ggra10239.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1674bp|location=Sequence derived from alignment at tig00000016_pilon:185273..186946+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGCTCATCGGCCTAGTACACGGAAGCGAGCGCTTGGAGAAGCCGTTTAG
TTTGACATCGATTGCGCATGTGAAGAAAGCGATCGAGAATCTTCGCATGA
AGGACAAAAACGCTGTACCGGACAAGAATGCGTCCATGTGGAATCTGGAC
TTTCTGAAGCACATTGCCGAGATGAAGGACCTCTCTGAAAAGACTATTCA
AACTGAACTCTCCAGTTCTCCAGAAACCAGGACCAAGAGTCTCGCTGACA
ACCCTGAAGGGGCCACTGATAAAAAGGAAAGCGCTGAGGAGAAAGCGAAG
GGCGGAGACAACCCGTCCCTCGCTCGCATGTTGAAAGAATTGGTCAAGTC
CGTCACAGACGCCTCTCAGAAACGTTCATCGCATTCGTCTATTCGAATCG
GAGAAGCCGACATTCCAATAGAAAAAGTGACCGCTGTGGGAGATGTTGAC
GGAAACGGCTTTGAAGATTACATCGTGGCAAATCCGAGTTCCAAGAATGG
CACTGGTACAATTCGTCTATATCTCATGACCGCGGACAGCAAGTTCTTGT
ATACCAGAGACCTGGTACCCGGAAGGTATGGCTTCGTCAGTTCCCCACTG
GCTGAAGGAGATCGATTCGGTGACTCCGTGGAGAAGATTACAAGCGATAC
GCCCAACTTTTCGTTCGTGACTGTCACCGCGCCTGGAGACCGCTCCGTAG
CAGGAGGCAAAGGAGCATTCTACATCCTGCAACTATCCGACAAGGGAAAT
GTGATCAACAGTGCCAAGTTATCAGCCAAGACGATCGAAACAGTAGTGGC
TCGATCCGCCAACGGCGACGAATCCAAATACTCGGCCAATCTCAACCGGT
CTATACTCTCCAAGAAGATTGTAGACATTTTGAGCAACAAGACGTCAATG
CTGCTCGTTCGCAAGGGCGGAGAGATCAAAGGAGCGTACGTAATCTCTTC
TGCTGAGGATCACAAGATGTTGCAAGACATTGAACAAAAGATGACTCCCA
GAAAACGGCTGGCATCTCTTCGACTGGAATCGCCTCTCGTTCGAGCGGAC
ATTTCAAGCAACTGCTTCTTCAACGACACGCACTGTGCGTGCGCATCAAA
CGCACCTCCAGCAGGGTCTGGGCAATGCACGCAAGTGATCGGCACGGAGC
AATCGAGCGGGAAGACGCTGTGTCAGACGCGAGACTGCATGGCATCTTAC
TCTTGCATGTGCGAAGGCATACAACTTTGTGCACGAAGCGAGCGCACATT
AACGTCGTACACAGTGGAAGGCGCAGCTCCGGGTGGAAACATGTACTGCA
ACAGCGTACAAAAGACAATCACAGAAAACGTGGTGATTGCAGGCGCTGAA
GTGCCGGTGATTCTAAGCGTGAATGACTTGCCACCGTACAACGCGACTCA
TTGTCGGTGCGCGCAGAAACAATCAGTGACAGGCACGGCGATATGTCTGG
ACGTCGTGCGCGCTCTAAGTGGGGTGAACTACGTGTGTTCTGAGAGGAAT
TGTAGGATTGGAGCGGGTGAATACATTTGCGATGCGTTTGGAGACTCGTA
CTGTTCTCGCAGCTTCGAGGAGAAGATGCATTACGTGAAGGACGGGGAGA
AGACAGATGAGGCCGGAGCGGTGTTCTGTCATCGCGAAGCATACCAAGCT
GAAAGCGTGACGAAGATACTTTAA back to topprotein sequence of Ggra10239.t1 >Ggra10239.t1 ID=Ggra10239.t1|Name=Ggra10239.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=558bp
MLIGLVHGSERLEKPFSLTSIAHVKKAIENLRMKDKNAVPDKNASMWNLD
FLKHIAEMKDLSEKTIQTELSSSPETRTKSLADNPEGATDKKESAEEKAK
GGDNPSLARMLKELVKSVTDASQKRSSHSSIRIGEADIPIEKVTAVGDVD
GNGFEDYIVANPSSKNGTGTIRLYLMTADSKFLYTRDLVPGRYGFVSSPL
AEGDRFGDSVEKITSDTPNFSFVTVTAPGDRSVAGGKGAFYILQLSDKGN
VINSAKLSAKTIETVVARSANGDESKYSANLNRSILSKKIVDILSNKTSM
LLVRKGGEIKGAYVISSAEDHKMLQDIEQKMTPRKRLASLRLESPLVRAD
ISSNCFFNDTHCACASNAPPAGSGQCTQVIGTEQSSGKTLCQTRDCMASY
SCMCEGIQLCARSERTLTSYTVEGAAPGGNMYCNSVQKTITENVVIAGAE
VPVILSVNDLPPYNATHCRCAQKQSVTGTAICLDVVRALSGVNYVCSERN
CRIGAGEYICDAFGDSYCSRSFEEKMHYVKDGEKTDEAGAVFCHREAYQA
ESVTKIL* back to topmRNA from alignment at tig00000016_pilon:185273..186946+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra10239.t1 ID=Ggra10239.t1|Name=Ggra10239.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1674bp|location=Sequence derived from alignment at tig00000016_pilon:185273..186946+ (Gracilaria gracilis GNS1m male)
ATGCTCATCGGCCTAGTACACGGAAGCGAGCGCTTGGAGAAGCCGTTTAG
TTTGACATCGATTGCGCATGTGAAGAAAGCGATCGAGAATCTTCGCATGA
AGGACAAAAACGCTGTACCGGACAAGAATGCGTCCATGTGGAATCTGGAC
TTTCTGAAGCACATTGCCGAGATGAAGGACCTCTCTGAAAAGACTATTCA
AACTGAACTCTCCAGTTCTCCAGAAACCAGGACCAAGAGTCTCGCTGACA
ACCCTGAAGGGGCCACTGATAAAAAGGAAAGCGCTGAGGAGAAAGCGAAG
GGCGGAGACAACCCGTCCCTCGCTCGCATGTTGAAAGAATTGGTCAAGTC
CGTCACAGACGCCTCTCAGAAACGTTCATCGCATTCGTCTATTCGAATCG
GAGAAGCCGACATTCCAATAGAAAAAGTGACCGCTGTGGGAGATGTTGAC
GGAAACGGCTTTGAAGATTACATCGTGGCAAATCCGAGTTCCAAGAATGG
CACTGGTACAATTCGTCTATATCTCATGACCGCGGACAGCAAGTTCTTGT
ATACCAGAGACCTGGTACCCGGAAGGTATGGCTTCGTCAGTTCCCCACTG
GCTGAAGGAGATCGATTCGGTGACTCCGTGGAGAAGATTACAAGCGATAC
GCCCAACTTTTCGTTCGTGACTGTCACCGCGCCTGGAGACCGCTCCGTAG
CAGGAGGCAAAGGAGCATTCTACATCCTGCAACTATCCGACAAGGGAAAT
GTGATCAACAGTGCCAAGTTATCAGCCAAGACGATCGAAACAGTAGTGGC
TCGATCCGCCAACGGCGACGAATCCAAATACTCGGCCAATCTCAACCGGT
CTATACTCTCCAAGAAGATTGTAGACATTTTGAGCAACAAGACGTCAATG
CTGCTCGTTCGCAAGGGCGGAGAGATCAAAGGAGCGTACGTAATCTCTTC
TGCTGAGGATCACAAGATGTTGCAAGACATTGAACAAAAGATGACTCCCA
GAAAACGGCTGGCATCTCTTCGACTGGAATCGCCTCTCGTTCGAGCGGAC
ATTTCAAGCAACTGCTTCTTCAACGACACGCACTGTGCGTGCGCATCAAA
CGCACCTCCAGCAGGGTCTGGGCAATGCACGCAAGTGATCGGCACGGAGC
AATCGAGCGGGAAGACGCTGTGTCAGACGCGAGACTGCATGGCATCTTAC
TCTTGCATGTGCGAAGGCATACAACTTTGTGCACGAAGCGAGCGCACATT
AACGTCGTACACAGTGGAAGGCGCAGCTCCGGGTGGAAACATGTACTGCA
ACAGCGTACAAAAGACAATCACAGAAAACGTGGTGATTGCAGGCGCTGAA
GTGCCGGTGATTCTAAGCGTGAATGACTTGCCACCGTACAACGCGACTCA
TTGTCGGTGCGCGCAGAAACAATCAGTGACAGGCACGGCGATATGTCTGG
ACGTCGTGCGCGCTCTAAGTGGGGTGAACTACGTGTGTTCTGAGAGGAAT
TGTAGGATTGGAGCGGGTGAATACATTTGCGATGCGTTTGGAGACTCGTA
CTGTTCTCGCAGCTTCGAGGAGAAGATGCATTACGTGAAGGACGGGGAGA
AGACAGATGAGGCCGGAGCGGTGTTCTGTCATCGCGAAGCATACCAAGCT
GAAAGCGTGACGAAGATACTTTAA back to topCoding sequence (CDS) from alignment at tig00000016_pilon:185273..186946+ >Ggra10239.t1 ID=Ggra10239.t1|Name=Ggra10239.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1674bp|location=Sequence derived from alignment at tig00000016_pilon:185273..186946+ (Gracilaria gracilis GNS1m male)
ATGCTCATCGGCCTAGTACACGGAAGCGAGCGCTTGGAGAAGCCGTTTAG
TTTGACATCGATTGCGCATGTGAAGAAAGCGATCGAGAATCTTCGCATGA
AGGACAAAAACGCTGTACCGGACAAGAATGCGTCCATGTGGAATCTGGAC
TTTCTGAAGCACATTGCCGAGATGAAGGACCTCTCTGAAAAGACTATTCA
AACTGAACTCTCCAGTTCTCCAGAAACCAGGACCAAGAGTCTCGCTGACA
ACCCTGAAGGGGCCACTGATAAAAAGGAAAGCGCTGAGGAGAAAGCGAAG
GGCGGAGACAACCCGTCCCTCGCTCGCATGTTGAAAGAATTGGTCAAGTC
CGTCACAGACGCCTCTCAGAAACGTTCATCGCATTCGTCTATTCGAATCG
GAGAAGCCGACATTCCAATAGAAAAAGTGACCGCTGTGGGAGATGTTGAC
GGAAACGGCTTTGAAGATTACATCGTGGCAAATCCGAGTTCCAAGAATGG
CACTGGTACAATTCGTCTATATCTCATGACCGCGGACAGCAAGTTCTTGT
ATACCAGAGACCTGGTACCCGGAAGGTATGGCTTCGTCAGTTCCCCACTG
GCTGAAGGAGATCGATTCGGTGACTCCGTGGAGAAGATTACAAGCGATAC
GCCCAACTTTTCGTTCGTGACTGTCACCGCGCCTGGAGACCGCTCCGTAG
CAGGAGGCAAAGGAGCATTCTACATCCTGCAACTATCCGACAAGGGAAAT
GTGATCAACAGTGCCAAGTTATCAGCCAAGACGATCGAAACAGTAGTGGC
TCGATCCGCCAACGGCGACGAATCCAAATACTCGGCCAATCTCAACCGGT
CTATACTCTCCAAGAAGATTGTAGACATTTTGAGCAACAAGACGTCAATG
CTGCTCGTTCGCAAGGGCGGAGAGATCAAAGGAGCGTACGTAATCTCTTC
TGCTGAGGATCACAAGATGTTGCAAGACATTGAACAAAAGATGACTCCCA
GAAAACGGCTGGCATCTCTTCGACTGGAATCGCCTCTCGTTCGAGCGGAC
ATTTCAAGCAACTGCTTCTTCAACGACACGCACTGTGCGTGCGCATCAAA
CGCACCTCCAGCAGGGTCTGGGCAATGCACGCAAGTGATCGGCACGGAGC
AATCGAGCGGGAAGACGCTGTGTCAGACGCGAGACTGCATGGCATCTTAC
TCTTGCATGTGCGAAGGCATACAACTTTGTGCACGAAGCGAGCGCACATT
AACGTCGTACACAGTGGAAGGCGCAGCTCCGGGTGGAAACATGTACTGCA
ACAGCGTACAAAAGACAATCACAGAAAACGTGGTGATTGCAGGCGCTGAA
GTGCCGGTGATTCTAAGCGTGAATGACTTGCCACCGTACAACGCGACTCA
TTGTCGGTGCGCGCAGAAACAATCAGTGACAGGCACGGCGATATGTCTGG
ACGTCGTGCGCGCTCTAAGTGGGGTGAACTACGTGTGTTCTGAGAGGAAT
TGTAGGATTGGAGCGGGTGAATACATTTGCGATGCGTTTGGAGACTCGTA
CTGTTCTCGCAGCTTCGAGGAGAAGATGCATTACGTGAAGGACGGGGAGA
AGACAGATGAGGCCGGAGCGGTGTTCTGTCATCGCGAAGCATACCAAGCT
GAAAGCGTGACGAAGATACTTTAA back to top
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