Ggra5762.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5762.t1
Unique NameGgra5762.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length230
Homology
BLAST of Ggra5762.t1 vs. uniprot
Match: W2YME6 (DDE Tnp4 domain-containing protein n=1 Tax=Phytophthora parasitica P10297 TaxID=1317064 RepID=W2YME6_PHYPR)

HSP 1 Score: 187 bits (475), Expect = 1.020e-54
Identity = 95/229 (41.48%), Postives = 136/229 (59.39%), Query Frame = 0
Query:    1 MTNFNRNELTELYTRMKNSISVEWEEDRGRKSQFSGFDILFMTLTACKVGGTWDSIARIFGIKGNTFQKPVLNFVNSFERDFYVDFVFHYEEIFTVSYFNLKGKRFVNFPHARYCTDVVFIHGNRPAGSMKDVKSYYSGKHKLYNLKSEVSVLPCGNAINCTDPTPVSAADSSIFRQNLSFHNRALEKNEADKEISDDRSLKEKYPDLWACHVDKEYTGMDAYLRCIFP 229
            +TNF   E   ++  +   +  +W   RG+K +++  D+ FMTL++ K  G WD++AR+F I  +TFQK +  F++      Y  +V    + +T+      G  F  FP+ARY TDV F H N+P+G+M ++  YYSGKH LY  K EVSVLP G AINCT+ T  S  D+ IF +N +FH+RAL K+ +D  + D+  L++KYP  WA  VDK Y GM    R I P
Sbjct:   80 LTNFAPEEFDHVWAAVYPHLQGKWNVGRGKKCRYAARDVFFMTLSSLKHLGKWDTVARVFRIPSSTFQKMIRKFMDILSPILYEMYVEKANDQWTLGKIVRSGHAFKYFPYARYATDVTFQHANKPSGNMSEILHYYSGKHHLYGYKVEVSVLPNGVAINCTEHTGGSTHDAEIFCRNAAFHSRALHKHSSDANVRDEGKLQDKYPKEWAVLVDKGYQGMAREYRAIHP 308          
BLAST of Ggra5762.t1 vs. uniprot
Match: W2KB22 (DDE Tnp4 domain-containing protein n=5 Tax=Phytophthora parasitica TaxID=4792 RepID=W2KB22_PHYPR)

HSP 1 Score: 186 bits (471), Expect = 1.660e-54
Identity = 97/222 (43.69%), Postives = 131/222 (59.01%), Query Frame = 0
Query:    8 ELTELYTRMKNSISVEWEEDRGRKSQFSGFDILFMTLTACKVGGTWDSIARIFGIKGNTFQKPVLNFVNSFERDFYVDFVFHYEEIFTVSYFNLKGKRFVNFPHARYCTDVVFIHGNRPAGSMKDVKSYYSGKHKLYNLKSEVSVLPCGNAINCTDPTPVSAADSSIFRQNLSFHNRALEKNEADKEISDDRSLKEKYPDLWACHVDKEYTGMDAYLRCIFP 229
            E  +L+T +   +   W   RG+K +++   + FMTLT  K  G WD ++R+F I  ++FQK V  F+++     Y  FV    + +T+      G  F NFP+ARY TDV F   N+PAG+M ++K YYSGKH LY  K EVSVLP G AINCTD T  S  D++IF+ N++FH RA+ K E D+ + D+  L E YP  WA  VDK Y GM    R I P
Sbjct:   87 EFEQLWTVVYPHVKEHWNVGRGKKGRYAARYVFFMTLTTLKHLGKWDIVSRVFKIPPSSFQKMVRRFMDAASPFLYEAFVESINDKWTLGKIVRSGHAFQNFPYARYATDVTFQQANKPAGNMNEIKPYYSGKHHLYGYKVEVSVLPNGLAINCTDHTGGSTHDAAIFKDNVAFHARAMRKQEDDRGLRDEGRLHEVYPKDWAVLVDKGYQGMARECRAIHP 308          
BLAST of Ggra5762.t1 vs. uniprot
Match: A0A0W8DEI6 (DDE Tnp4 domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DEI6_PHYNI)

HSP 1 Score: 185 bits (470), Expect = 1.400e-53
Identity = 95/229 (41.48%), Postives = 135/229 (58.95%), Query Frame = 0
Query:    1 MTNFNRNELTELYTRMKNSISVEWEEDRGRKSQFSGFDILFMTLTACKVGGTWDSIARIFGIKGNTFQKPVLNFVNSFERDFYVDFVFHYEEIFTVSYFNLKGKRFVNFPHARYCTDVVFIHGNRPAGSMKDVKSYYSGKHKLYNLKSEVSVLPCGNAINCTDPTPVSAADSSIFRQNLSFHNRALEKNEADKEISDDRSLKEKYPDLWACHVDKEYTGMDAYLRCIFP 229
            +TNF   E   ++  +   +  +W   RG+K +++  D+ FMTL++ K  G WD++AR+F I  +TFQK +  F++      Y  +V    + +T+      G  F  FP+ARY TDV F H N+P+G+M ++   YSGKH LY  K EVSVLP G AINCT+ T  S  D+ IFR+N  FH+RAL K+ +D  + D+  L++KYP  WA  VDK Y GM    R I P
Sbjct:   80 LTNFAPEEFDHVWAAVYPHLQGKWNVGRGKKCRYAARDVFFMTLSSLKHLGKWDTVARVFRIPPSTFQKMIRKFMDILSPILYEMYVEKANDQWTLGKIVRSGHAFKYFPYARYATDVTFQHANKPSGNMSEILRCYSGKHHLYGYKVEVSVLPNGVAINCTEHTGGSTHDAEIFRRNAXFHSRALHKHSSDANVRDEGKLQDKYPKEWAVLVDKGYQGMAREYRAIHP 308          
BLAST of Ggra5762.t1 vs. uniprot
Match: W2QX46 (DDE Tnp4 domain-containing protein n=4 Tax=Phytophthora parasitica TaxID=4792 RepID=W2QX46_PHYPN)

HSP 1 Score: 176 bits (445), Expect = 1.330e-49
Identity = 98/228 (42.98%), Postives = 131/228 (57.46%), Query Frame = 0
Query:    2 TNFNRNELTELYTRMKNSISVEWEEDRGRKSQFSGFDILFMTLTACKVGGTWDSIARIFGIKGNTFQKPVLNFVNSFERDFYVDFVFHYEEIFTVSYFNLKGKRFVNFPHARYCTDVVFIHGNRPAGSMKDVKSYYSGKHKLYNLKSEVSVLPCGNAINCTDPTPVSAADSSIFRQNLSFHNRALEKNEADKEISDDRSLKEKYPDLWACHVDKEYTGMDAYLRCIFP 229
            TNF   EL  L++ ++  ++  W   RGR+SQF+G D+LFMTL A K GGTWD  A +F IK  TF K + +F     +  Y ++V        +      G  F ++P A   TDV F   NRPAG+M +V  YYS KHKLY LK EVSV P G AINC+     +  D SIFR N+ FH+    K+E   +I D+  L+E++   WA   DK Y G++A+LRCI P
Sbjct:   73 TNFTPCELNVLWSIVRLHVTRYWNVGRGRRSQFAGKDVLFMTLAAFKHGGTWDMNAHVFLIKTPTFIKTITSFCRVLAQRVYDEWVRGKAVETNMRRLVTSGNTFSHYPCALNATDVTFQQANRPAGNMTEVMPYYSAKHKLYGLKVEVSVNPKGFAINCSQHERGNTPDISIFRNNMEFHSSMRVKSETGNQIPDEGPLREEFSREWAVLTDKGYQGLEAHLRCIQP 300          
BLAST of Ggra5762.t1 vs. uniprot
Match: A0A6A3V8Z8 (DDE Tnp4 domain-containing protein n=10 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3V8Z8_9STRA)

HSP 1 Score: 176 bits (445), Expect = 2.530e-49
Identity = 97/229 (42.36%), Postives = 128/229 (55.90%), Query Frame = 0
Query:    1 MTNFNRNELTELYTRMKNSISVEWEEDRGRKSQFSGFDILFMTLTACKVGGTWDSIARIFGIKGNTFQKPVLNFVNSFERDFYVDFVFHYEEIFTVSYFNLKGKRFVNFPHARYCTDVVFIHGNRPAGSMKDVKSYYSGKHKLYNLKSEVSVLPCGNAINCTDPTPVSAADSSIFRQNLSFHNRALEKNEADKEISDDRSLKEKYPDLWACHVDKEYTGMDAYLRCIFP 229
            +TNF+  E   L+  +   ++  W   RGR+S  +G D+ FMTL+  K GGTWD  A IF +K  TF K +  F++      Y D+V    +  T+      G+ F NFP A Y TDV F   NRPAGSM +V  +YSGKHKLY LK EVSV P G AINC+D    +  D ++FR N  F +    K+E+D  ++D   LKE + D WA   DK Y G+    RCI P
Sbjct:   70 LTNFSPREFNRLWGSVCPHVTRYWNVGRGRRSALAGKDVFFMTLSVLKFGGTWDMNAAIFCVKTPTFIKTITAFLHVLAPRMYDDWVRAKADETTMRNLVTSGRTFPNFPCALYATDVTFQQSNRPAGSMAEVMPFYSGKHKLYGLKVEVSVNPRGVAINCSDHARGNTPDITMFRNNTEFDDAIRLKSESDLNLADGGPLKETFADEWALLADKGYQGLGDQKRCIHP 298          
BLAST of Ggra5762.t1 vs. uniprot
Match: A0A329RZ31 (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RZ31_9STRA)

HSP 1 Score: 169 bits (429), Expect = 6.620e-49
Identity = 86/211 (40.76%), Postives = 127/211 (60.19%), Query Frame = 0
Query:   20 ISVEWEEDRGRKS-QFSGFDILFMTLTACKVGGTWDSIARIFGIKGNTFQKPVLNFVNSFERDFYVDFVFHYEEIFTVSYFNLKGKRFVNFPHARYCTDVVFIHGNRPAGSMKDVKSYYSGKHKLYNLKSEVSVLPCGNAINCTDPTPVSAADSSIFRQNLSFHNRALEKNEADKEISDDRSLKEKYPDLWACHVDKEYTGMDAYLRCIFP 229
            +  +W   RG+K  + S  DILFM L A K  G WD+++ +F I  + FQK +  ++   E   Y +FV + E+ +T++     G  F NFP ARY T+V F H +RP+G++ +VK Y+SGKH  +  K EVSVLP G A+NCTD  P S AD ++F+ N SFH  A++K + +  + DD  L +++ D WA  VD+ Y G++   R I P
Sbjct:   18 VLADWNVGRGKKKCKQSPKDILFMMLGALKNCGRWDTVSAMFEIDSSPFQKMIKKYLIMIEPFLYGNFVLNEEKRWTMNQLMASGNTFTNFPSARYATNVTFQHADRPSGNINEVKKYFSGKHNFHGHKVEVSVLPTGAAVNCTDFEPPSVADVAMFQHNASFHRSAMKKLQDESVLRDDGPLTDQFQDDWAVLVDEGYQGLEGEFRAIQP 228          
BLAST of Ggra5762.t1 vs. uniprot
Match: A0A0W8CH09 (Succinyl-CoA:3-ketoacid coenzyme A transferase n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8CH09_PHYNI)

HSP 1 Score: 171 bits (434), Expect = 9.990e-48
Identity = 93/229 (40.61%), Postives = 122/229 (53.28%), Query Frame = 0
Query:    1 MTNFNRNELTELYTRMKNSISVEWEEDRGRKSQFSGFDILFMTLTACKVGGTWDSIARIFGIKGNTFQKPVLNFVNSFERDFYVDFVFHYEEIFTVSYFNLKGKRFVNFPHARYCTDVVFIHGNRPAGSMKDVKSYYSGKHKLYNLKSEVSVLPCGNAINCTDPTPVSAADSSIFRQNLSFHNRALEKNEADKEISDDRSLKEKYPDLWACHVDKEYTGMDAYLRCIFP 229
            MT F   E   L++ +++ ++V W    GR+S F G D+ FM LT  K  G WD +A +F +K  +FQK V  F        Y   V    E F +    L G+ F N+P+ARY T V F   N PAG M++   YYS KH L+  K EVSVLP G A+NCT   P +  D  +FR+N  FH +AL K + D EI DD  L  +YP  WA   DK Y G+    R + P
Sbjct:   54 MTYFGTLEFERLWSMIRDHMTVNWNTGCGRRSSFGGKDVFFMLLTVLKNCGKWDVVAAVFRVKTPSFQKMVTKFATVLSPFLYETLVASALERFPMKKLVLGGQAFTNYPYARYATAVTFQQSNMPAGRMQERALYYSKKHHLHGYKVEVSVLPNGQAVNCTQHFPGNTGDIDVFRRNAEFHLQALCKVDGDDEIPDDGRLVAQYPSSWAVLADKGYQGLARDFRAVTP 282          
BLAST of Ggra5762.t1 vs. uniprot
Match: W2Z5H9 (DDE Tnp4 domain-containing protein n=2 Tax=Phytophthora parasitica TaxID=4792 RepID=W2Z5H9_PHYPR)

HSP 1 Score: 171 bits (432), Expect = 2.970e-47
Identity = 94/229 (41.05%), Postives = 122/229 (53.28%), Query Frame = 0
Query:    1 MTNFNRNELTELYTRMKNSISVEWEEDRGRKSQFSGFDILFMTLTACKVGGTWDSIARIFGIKGNTFQKPVLNFVNSFERDFYVDFVFHYEEIFTVSYFNLKGKRFVNFPHARYCTDVVFIHGNRPAGSMKDVKSYYSGKHKLYNLKSEVSVLPCGNAINCTDPTPVSAADSSIFRQNLSFHNRALEKNEADKEISDDRSLKEKYPDLWACHVDKEYTGMDAYLRCIFP 229
            MTNF   E   L++ +++ ++V      GR+S F G D+ FM LT  K  G WD +A +F +K  +FQK V  F        Y   V    E F +    L G+ F N+P+ARY TDV F   N PAG M++   YYS KH L   K EVSVLP G A+NCT   P +  D  +FR+N  FH +AL K + D EI DD  L  +YP  WA   DK Y G+    R + P
Sbjct:   76 MTNFGPLEFERLWSMIRDHMTVNCNTGCGRRSSFGGKDVFFMLLTVLKNCGKWDVVAAVFRVKTPSFQKMVTKFTTVLSPFLYETLVASALERFPMKKLVLGGQAFTNYPYARYATDVTFQQSNMPAGRMQEHALYYSKKHHLNGYKVEVSVLPNGQAVNCTQHFPGNTGDIDVFRRNAEFHLQALCKVDGDDEIPDDGRLVAQYPSSWAVLADKGYQGLARDFRAVTP 304          
BLAST of Ggra5762.t1 vs. uniprot
Match: A0A6A3U1F9 (DDE Tnp4 domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3U1F9_9STRA)

HSP 1 Score: 161 bits (408), Expect = 9.280e-45
Identity = 92/229 (40.17%), Postives = 123/229 (53.71%), Query Frame = 0
Query:    1 MTNFNRNELTELYTRMKNSISVEWEEDRGRKSQFSGFDILFMTLTACKVGGTWDSIARIFGIKGNTFQKPVLNFVNSFERDFYVDFVFHYEEIFTVSYFNLKGKRFVNFPHARYCTDVVFIHGNRPAGSMKDVKSYYSGKHKLYNLKSEVSVLPCGNAINCTDPTPVSAADSSIFRQNLSFHNRALEKNEADKEISDDRSLKEKYPDLWACHVDKEYTGMDAYLRCIFP 229
            +TNF   E   L+T +   +   W   RGRK      D+LFM L + K  G WD +A +F IK  TFQK +++F +      Y  F     + +T+      G  F N P ARY TDV+F   N P+G MK+  +YYS  H L+  K EVSVLP G AINCT+    S AD  IFR N  FH + L K+  +KE+ DD +L++KYP+ W    D+ Y G+    R I P
Sbjct:   71 LTNFAPIEFERLWTCLHGYLRDHWNVGRGRKCTQRPKDMLFMFLASLKHCGKWDVVASVFKIKPPTFQKMIMSFASVVSSFLYEMFAVSAADKYTME---TLGNTFRNNPCARYATDVIFQQTNMPSGQMKEPSAYYSENHHLHGYKVEVSVLPNGLAINCTNHFSGSEADIDIFRNNAKFHQQHLLKSNKEKELVDDGALRDKYPETWVVLADEGYQGLVEDFRAITP 296          
BLAST of Ggra5762.t1 vs. uniprot
Match: A0A6A3JSE3 (DDE Tnp4 domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=A0A6A3JSE3_9STRA)

HSP 1 Score: 162 bits (411), Expect = 4.040e-44
Identity = 93/229 (40.61%), Postives = 123/229 (53.71%), Query Frame = 0
Query:    1 MTNFNRNELTELYTRMKNSISVEWEEDRGRKSQFSGFDILFMTLTACKVGGTWDSIARIFGIKGNTFQKPVLNFVNSFERDFYVDFVFHYEEIFTVSYFNLKGKRFVNFPHARYCTDVVFIHGNRPAGSMKDVKSYYSGKHKLYNLKSEVSVLPCGNAINCTDPTPVSAADSSIFRQNLSFHNRALEKNEADKEISDDRSLKEKYPDLWACHVDKEYTGMDAYLRCIFP 229
            M NF   EL  ++  +++ +   W   RG+KS  +   IL+MTL A K  G+W++ + +F +  + FQK V  FV   +      FV   E   T+ +  L GK F N P ARY TDV F   +RP G   D K+Y+SGKH LY LK EVSV+P G AINCTD    S AD SIFR N  FH  A++K   +  I+      ++Y   WA  VDK Y G+    R I P
Sbjct:   75 MCNFAPVELERIWDAVEDHVMKHWNVGRGKKSANAPKGILYMTLAALKHCGSWETASAMFDMYPSPFQKMVKKFVTMLDPCLCQIFVLDEEGRSTMRHLTLTGKTFANVPCARYATDVTFQQADRPVGGYNDAKTYFSGKHHLYGLKVEVSVIPTGVAINCTDWEAGSMADISIFRANKHFHTSAMQKRPGEDTINVQGPQADRYQHDWAVLVDKGYQGLQDEFRTIQP 303          
The following BLAST results are available for this feature:
BLAST of Ggra5762.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W2YME61.020e-5441.48DDE Tnp4 domain-containing protein n=1 Tax=Phytoph... [more]
W2KB221.660e-5443.69DDE Tnp4 domain-containing protein n=5 Tax=Phytoph... [more]
A0A0W8DEI61.400e-5341.48DDE Tnp4 domain-containing protein n=5 Tax=Phytoph... [more]
W2QX461.330e-4942.98DDE Tnp4 domain-containing protein n=4 Tax=Phytoph... [more]
A0A6A3V8Z82.530e-4942.36DDE Tnp4 domain-containing protein n=10 Tax=Phytop... [more]
A0A329RZ316.620e-4940.76DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A0W8CH099.990e-4840.61Succinyl-CoA:3-ketoacid coenzyme A transferase n=1... [more]
W2Z5H92.970e-4741.05DDE Tnp4 domain-containing protein n=2 Tax=Phytoph... [more]
A0A6A3U1F99.280e-4540.17DDE Tnp4 domain-containing protein n=2 Tax=Phytoph... [more]
A0A6A3JSE34.040e-4440.61DDE Tnp4 domain-containing protein n=12 Tax=Phytop... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000257_piloncontigtig00000257_pilon:50389..51078 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5762.t1Ggra5762.t1Gracilaria gracilis GNS1m malemRNAtig00000257_pilon 50389..51078 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5762.t1 ID=Ggra5762.t1|Name=Ggra5762.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=230bp
MTNFNRNELTELYTRMKNSISVEWEEDRGRKSQFSGFDILFMTLTACKVG
GTWDSIARIFGIKGNTFQKPVLNFVNSFERDFYVDFVFHYEEIFTVSYFN
LKGKRFVNFPHARYCTDVVFIHGNRPAGSMKDVKSYYSGKHKLYNLKSEV
SVLPCGNAINCTDPTPVSAADSSIFRQNLSFHNRALEKNEADKEISDDRS
LKEKYPDLWACHVDKEYTGMDAYLRCIFP*
back to top