Ggra10262.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10262.t1
Unique NameGgra10262.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length330
Homology
BLAST of Ggra10262.t1 vs. uniprot
Match: A0A2V3IG26 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG26_9FLOR)

HSP 1 Score: 165 bits (418), Expect = 2.760e-44
Identity = 121/349 (34.67%), Postives = 180/349 (51.58%), Query Frame = 0
Query:    9 GNETAGEARKVPQTIVETLQAPRLIDIDRKDFVIFKHRRSEYERLVKEKNEQPGVNVIPTSLRSSCSDAVLQMMIILQLVPASNVEAITDDQLRACIETHTVVKPEDYNLAIIEREL------------------------------NVGCPNFVTDKERLAVQHVFKLVKEERLRTQIILIWRLKKEEGFRNDYGVFFRALVKKARTIDTQDAAVSLRDAEISSDPEEPKGRKRAPT--RSGKLKSGYKRSEEDGPPSRRKRR---------SCLNPECEEDHLVKDCSRTSAEYRKKLLAD-SRAQRDRKRRFNDTKGGK--GSVSSTNSSNEADNSALFSADPATG 313
            G ETA +   V +TI+E+++APRL DI  +DFV+FK +R  YER + EKN + G+ V  T+ R+S +  VL M +    VP  +VE IT+  LR C+E    V PE+Y+LA IER+L                              N+G   F+  + +LAV+HV K V  E+LR +++L  +L+K+EGF+ +Y VF R LVK+A+ ID  +AA   +     SD ++    K  P   R+ K +                           SCLNP C+  H + +C  TS E +KKL+A+   A++ RK      KG K  G++ + + +   +NS+LFSA   TG
Sbjct:   11 GPETATDT--VRKTIIESVEAPRLKDISTEDFVLFKQKREVYERKIAEKNAESGIQVPLTTYRNSITKPVLDMFVTACWVPVESVEDITEQHLRQCVEEQARVNPEEYDLAQIERDLKYVRMDKNTKSNSLDMQVLRLGLKYSTTLENLGYSEFIEKQPQLAVKHVIKRVTHEQLRKRMLLTIKLRKKEGFKKNYKVFMRELVKEAKQIDRHEAAKGFKARSNFSDSDDDLEHKEGPKPDRANKDRXXXXXXXXXXXXXXXXXXXXXXXXXXXSCLNPVCDGHHYMNECPSTSDEDKKKLVAEYHEAKKARKGAEKMRKGDKYKGNIGTVSGAEIEENSSLFSATFCTG 357          
BLAST of Ggra10262.t1 vs. uniprot
Match: A0A2V3IRL8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRL8_9FLOR)

HSP 1 Score: 140 bits (353), Expect = 9.130e-34
Identity = 86/244 (35.25%), Postives = 128/244 (52.46%), Query Frame = 0
Query:    7 SHGNETAGEARKVP-----QTIVETLQAPRLIDIDRKDFVIFKHRRSEYERLVKEKNEQPGVNVIPTSLRSSCSDAVLQMMIILQLVPASNVEAITDDQLRACIETHTVVKPEDYNLAIIEREL------------------------------NVGCPNFVTDKERLAVQHVFKLVKEERLRTQIILIWRLKKEEGFRNDYGVFFRALVKKARTIDTQDAAVSLRDAEISSDPEEPKGRKRAP 215
            S+    AG   + P     QTI+E+++APRL DI  +DFV+FK +   YER + EKN + G+ V   +  +S +  VL + +    VP  +VE IT+  LR C+E    V PE+YNLA IER+L                              N+G   F+  + +LAV+HV K V  E+LR +++L  +L+KEEGF+ +Y  F R L+K+A+ ID  +AA  L+     SD ++    K  P
Sbjct:    2 SNSENVAGSGPETPTDTVRQTIIESVEAPRLRDISTEDFVLFKQKLEVYERQIAEKNAESGIQVPLKTYWNSITKPVLDIFVTACWVPVESVEDITEQHLRQCVEEPAQVNPEEYNLAQIERDLKYVRMDKNTKSNSLEMQVLRLGLKYSTTLENLGYSEFIEKQPQLAVEHVIKRVTHEQLRKRMLLTIKLRKEEGFKKNYKAFMRELLKEAKQIDRHEAAKGLKARSNFSDSDDDLEHKEGP 245          
BLAST of Ggra10262.t1 vs. uniprot
Match: A0A2V3IZ32 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ32_9FLOR)

HSP 1 Score: 98.2 bits (243), Expect = 7.680e-21
Identity = 62/166 (37.35%), Postives = 86/166 (51.81%), Query Frame = 0
Query:    9 GNETAGEARKVPQTIVETLQAPRLIDIDRKDFVIFKHRRSEYERLVKEKNEQPGVNVIPTSLRSSCSDAVLQMMIILQLVPASNVEAITDDQLRACIETHTVVKPEDYNLAIIEREL------------------------------NVGCPNFVTDKERLAVQHV 144
            G ETA +   V QTI+E+++APRL DI  +DFV+FK +R  YER + EKN + G  V   + R+S +  VL M +    VP  +VE IT+  LR C+E    V PE Y+LA IER+L                              N+G   F+  + +LAV+HV
Sbjct:   11 GPETATDT--VRQTIIESVEAPRLKDISTEDFVLFKQKREVYERQIAEKNAESGTQVPLKTYRNSITKPVLDMFVTACWVPVESVEGITEQHLRQCVEERARVYPEQYDLAQIERDLKYVRMDKNTKSNSLEMQVLWLGLNYSTTLENLGYSEFIEKQPQLAVEHV 174          
BLAST of Ggra10262.t1 vs. uniprot
Match: A0A2V3IKC4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKC4_9FLOR)

HSP 1 Score: 71.2 bits (173), Expect = 6.250e-12
Identity = 42/94 (44.68%), Postives = 59/94 (62.77%), Query Frame = 0
Query:    9 GNETAGEARKVPQTIVETLQAPRLIDIDRKDFVIFKHRRSEYERLVKEKNEQPGVNVIPTSLRSSCSDAVLQMMIILQLVPASNVEAITDDQLR 102
            G ETA +   V QTI+E+++APRL DI  + FV+FK +R  YER + EKN + G+ V  T+LR+S +  VL M +    V   +VE IT+  LR
Sbjct:   11 GPETATDT--VRQTIIESVEAPRLKDISTEYFVLFKQKREVYERQIAEKNAELGIQVPLTTLRNSITKPVLDMFVTACWVAVDSVEDITEQHLR 102          
BLAST of Ggra10262.t1 vs. uniprot
Match: A0A2V3ISV8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISV8_9FLOR)

HSP 1 Score: 64.7 bits (156), Expect = 3.790e-8
Identity = 52/160 (32.50%), Postives = 81/160 (50.62%), Query Frame = 0
Query:  128 GCPNFVTDKERLAVQHVFKLVKEERLRTQIILIWRLKKEEGFRNDYGVFFRALVKKARTIDTQDAAVSLRDAEI--SSDPE------------------EPKGRKRAPTRSGKLKSGYKRSEEDGPPSR---RKRR--SCLNPECEEDHLVKDCSRTSAE 262
            G  NF+  K +LA++H+++ + +  L+T I LI  L KEE +  D+  F R  V++A+T+D + +A   RD+ I  + +PE                  E K R R  T         K+  + G P R   +K R  SCLNP+C+E+H ++D   TS E
Sbjct:   91 GYDNFIDTKPKLAIRHIYRKITDRSLKTSIKLILDLHKEE-YEIDFHNFVRKAVEEAKTVDLKASA--RRDSVIMEAENPETDLVRTSKGIKERNHSRYEGKERNRNSTMKQSCAEENKKDSKPGVPDRYLMQKLRCGSCLNPDCKENHRLRDYENTSVE 247          
The following BLAST results are available for this feature:
BLAST of Ggra10262.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IG262.760e-4434.67Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IRL89.130e-3435.25Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IZ327.680e-2137.35Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IKC46.250e-1244.68Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ISV83.790e-832.50Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 198..242
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 286..309
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 222..242
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 264..285
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 200..214
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 264..329

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:279359..280497 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10262.t1Ggra10262.t1Gracilaria gracilis GNS1m malemRNAtig00000016_pilon 279359..280497 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10262.t1 ID=Ggra10262.t1|Name=Ggra10262.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=330bp
MPSHTRSHGNETAGEARKVPQTIVETLQAPRLIDIDRKDFVIFKHRRSEY
ERLVKEKNEQPGVNVIPTSLRSSCSDAVLQMMIILQLVPASNVEAITDDQ
LRACIETHTVVKPEDYNLAIIERELNVGCPNFVTDKERLAVQHVFKLVKE
ERLRTQIILIWRLKKEEGFRNDYGVFFRALVKKARTIDTQDAAVSLRDAE
ISSDPEEPKGRKRAPTRSGKLKSGYKRSEEDGPPSRRKRRSCLNPECEED
HLVKDCSRTSAEYRKKLLADSRAQRDRKRRFNDTKGGKGSVSSTNSSNEA
DNSALFSADPATGNRGDEEEWFNCEIGAT*
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