Ggra1184.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra1184.t1
Unique NameGgra1184.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length565
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000237_piloncontigtig00000237_pilon:105611..107305 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1184Ggra1184Gracilaria gracilis GNS1m malegenetig00000237_pilon 105611..107305 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1184.t1.stop1Ggra1184.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000237_pilon 105611..105613 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1184.t1.CDS1Ggra1184.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000237_pilon 105611..107305 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1184.t1.exon1Ggra1184.t1.exon1Gracilaria gracilis GNS1m maleexontig00000237_pilon 105611..107305 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1184.t1.start1Ggra1184.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000237_pilon 107303..107305 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1184.t1Ggra1184.t1Gracilaria gracilis GNS1m malepolypeptidetig00000237_pilon 105611..107305 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra1184.t1 ID=Ggra1184.t1|Name=Ggra1184.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=565bp
MFGSFECHDANIATTAGFPGVYPCAAVAFHSPPTEQAKTRGTYRKINRGL
VEAIVASECDNGITIRGASDAKDDTINGNGRENVPGSSTAGLPSIAERFE
EVTEVRKVCAENVGNAGTCGAGDEGVSDEPFDPSGLPDEDYLDLMFMPLP
KEDRSRLSERKPLTSLFCELLPEVPVNETEGLEHQECGETMGNDESVPMI
ISDDDYLDQMFAPLPPEDKVRLSSNQTKESLFKELLGQDYAAEGLRVYEE
RRKEDVPSKPPTGDADTVEQCGTQMVQNGAQRAHDVRVWTQAPNSMARST
FPSQPQVEVPADQNALDESAPELNAPMQRSPDDSPKPKKRAKRKRSSKKV
AKPSQEGESQQQRKRRRTRVEDMNPADVHVCSYSGCGRRFARRYNLTVHE
RAHRNEHPFRCDVPGCGKPFMWQSSLVRHLRVHNKGRRSGGRKQRRKSAL
QPPPHLKKIDEQQYPGACSPSAVNQGKGFRLVEDVRALVSTVCLDQTHVA
LLGQKKPKIKEEINVKAHLEDRWHQFAQRQQQLEVMWNSPIVISRDIFLR
LYAAISPGTTEPHS*
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spliced messenger RNA

>Ggra1184.t1 ID=Ggra1184.t1|Name=Ggra1184.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1695bp|location=Sequence derived from alignment at tig00000237_pilon:105611..107305- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTTCGGTTCATTTGAATGTCATGATGCGAATATCGCCACTACGGCCGG
GTTTCCCGGTGTGTACCCGTGTGCTGCCGTCGCTTTTCATTCCCCACCAA
CTGAGCAAGCGAAAACCCGTGGAACTTATAGGAAGATCAACAGAGGGCTC
GTGGAAGCGATTGTGGCCTCAGAGTGTGACAACGGGATTACTATTAGAGG
AGCGTCAGATGCCAAGGATGATACGATCAATGGTAATGGACGTGAAAACG
TGCCTGGTTCCTCCACGGCAGGACTGCCGAGCATTGCAGAACGATTTGAA
GAAGTAACAGAAGTAAGGAAGGTATGTGCTGAGAATGTTGGAAATGCCGG
AACGTGTGGGGCAGGGGATGAGGGGGTAAGCGATGAGCCGTTTGACCCCT
CAGGCCTGCCAGATGAAGATTATCTGGACCTCATGTTTATGCCTCTGCCC
AAAGAGGATCGAAGCAGATTGTCCGAAAGGAAGCCACTTACAAGCCTGTT
TTGCGAGCTGCTGCCGGAGGTCCCGGTAAACGAAACGGAAGGACTAGAAC
ATCAGGAGTGTGGGGAGACCATGGGAAACGACGAGTCAGTCCCCATGATT
ATCTCAGATGACGATTATCTTGACCAAATGTTCGCACCTCTTCCCCCAGA
GGACAAGGTAAGACTGTCATCGAACCAAACCAAAGAAAGTTTGTTTAAGG
AGCTCTTGGGTCAAGATTATGCTGCCGAAGGTCTTCGCGTTTATGAAGAA
AGACGCAAGGAAGACGTTCCGTCGAAGCCTCCAACTGGTGATGCTGATAC
CGTGGAACAGTGTGGAACGCAGATGGTTCAAAACGGGGCTCAGCGAGCAC
ACGACGTGAGGGTATGGACACAGGCTCCGAACTCGATGGCGCGCTCGACC
TTTCCGAGTCAGCCTCAGGTTGAAGTTCCCGCTGACCAGAACGCCCTGGA
TGAAAGCGCTCCTGAACTAAACGCTCCAATGCAACGAAGCCCAGATGATT
CTCCTAAACCAAAGAAGCGTGCAAAACGCAAGAGGTCGTCGAAGAAGGTT
GCGAAGCCCTCGCAAGAAGGGGAGTCGCAACAGCAACGGAAGAGGCGACG
AACGCGGGTTGAGGACATGAACCCGGCTGATGTGCACGTTTGCAGTTATA
GCGGGTGTGGAAGACGGTTTGCCAGGCGCTACAACCTCACGGTTCATGAA
AGGGCGCACCGCAACGAACATCCTTTCAGGTGTGATGTGCCTGGCTGCGG
AAAACCATTCATGTGGCAGTCAAGTTTGGTGCGCCATCTCCGCGTGCACA
ATAAGGGACGAAGGTCGGGTGGGCGGAAGCAACGTCGAAAGTCTGCCCTT
CAGCCACCCCCTCATTTGAAGAAGATTGACGAGCAGCAATACCCGGGCGC
CTGCTCTCCATCTGCCGTGAACCAGGGAAAGGGGTTTCGTCTGGTCGAGG
ACGTACGGGCATTAGTGAGCACCGTATGCCTTGACCAGACGCATGTTGCG
CTGTTGGGGCAGAAGAAACCTAAAATCAAAGAGGAGATCAACGTGAAGGC
TCACTTGGAAGACCGCTGGCACCAGTTTGCCCAACGTCAGCAGCAGCTAG
AGGTGATGTGGAACTCGCCTATCGTGATCAGCAGAGACATATTCTTGCGG
CTGTATGCCGCGATTAGTCCTGGCACTACGGAACCCCACTCTTAA
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protein sequence of Ggra1184.t1

>Ggra1184.t1 ID=Ggra1184.t1|Name=Ggra1184.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=565bp
MFGSFECHDANIATTAGFPGVYPCAAVAFHSPPTEQAKTRGTYRKINRGL
VEAIVASECDNGITIRGASDAKDDTINGNGRENVPGSSTAGLPSIAERFE
EVTEVRKVCAENVGNAGTCGAGDEGVSDEPFDPSGLPDEDYLDLMFMPLP
KEDRSRLSERKPLTSLFCELLPEVPVNETEGLEHQECGETMGNDESVPMI
ISDDDYLDQMFAPLPPEDKVRLSSNQTKESLFKELLGQDYAAEGLRVYEE
RRKEDVPSKPPTGDADTVEQCGTQMVQNGAQRAHDVRVWTQAPNSMARST
FPSQPQVEVPADQNALDESAPELNAPMQRSPDDSPKPKKRAKRKRSSKKV
AKPSQEGESQQQRKRRRTRVEDMNPADVHVCSYSGCGRRFARRYNLTVHE
RAHRNEHPFRCDVPGCGKPFMWQSSLVRHLRVHNKGRRSGGRKQRRKSAL
QPPPHLKKIDEQQYPGACSPSAVNQGKGFRLVEDVRALVSTVCLDQTHVA
LLGQKKPKIKEEINVKAHLEDRWHQFAQRQQQLEVMWNSPIVISRDIFLR
LYAAISPGTTEPHS*
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mRNA from alignment at tig00000237_pilon:105611..107305-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra1184.t1 ID=Ggra1184.t1|Name=Ggra1184.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1695bp|location=Sequence derived from alignment at tig00000237_pilon:105611..107305- (Gracilaria gracilis GNS1m male)
ATGTTCGGTTCATTTGAATGTCATGATGCGAATATCGCCACTACGGCCGG
GTTTCCCGGTGTGTACCCGTGTGCTGCCGTCGCTTTTCATTCCCCACCAA
CTGAGCAAGCGAAAACCCGTGGAACTTATAGGAAGATCAACAGAGGGCTC
GTGGAAGCGATTGTGGCCTCAGAGTGTGACAACGGGATTACTATTAGAGG
AGCGTCAGATGCCAAGGATGATACGATCAATGGTAATGGACGTGAAAACG
TGCCTGGTTCCTCCACGGCAGGACTGCCGAGCATTGCAGAACGATTTGAA
GAAGTAACAGAAGTAAGGAAGGTATGTGCTGAGAATGTTGGAAATGCCGG
AACGTGTGGGGCAGGGGATGAGGGGGTAAGCGATGAGCCGTTTGACCCCT
CAGGCCTGCCAGATGAAGATTATCTGGACCTCATGTTTATGCCTCTGCCC
AAAGAGGATCGAAGCAGATTGTCCGAAAGGAAGCCACTTACAAGCCTGTT
TTGCGAGCTGCTGCCGGAGGTCCCGGTAAACGAAACGGAAGGACTAGAAC
ATCAGGAGTGTGGGGAGACCATGGGAAACGACGAGTCAGTCCCCATGATT
ATCTCAGATGACGATTATCTTGACCAAATGTTCGCACCTCTTCCCCCAGA
GGACAAGGTAAGACTGTCATCGAACCAAACCAAAGAAAGTTTGTTTAAGG
AGCTCTTGGGTCAAGATTATGCTGCCGAAGGTCTTCGCGTTTATGAAGAA
AGACGCAAGGAAGACGTTCCGTCGAAGCCTCCAACTGGTGATGCTGATAC
CGTGGAACAGTGTGGAACGCAGATGGTTCAAAACGGGGCTCAGCGAGCAC
ACGACGTGAGGGTATGGACACAGGCTCCGAACTCGATGGCGCGCTCGACC
TTTCCGAGTCAGCCTCAGGTTGAAGTTCCCGCTGACCAGAACGCCCTGGA
TGAAAGCGCTCCTGAACTAAACGCTCCAATGCAACGAAGCCCAGATGATT
CTCCTAAACCAAAGAAGCGTGCAAAACGCAAGAGGTCGTCGAAGAAGGTT
GCGAAGCCCTCGCAAGAAGGGGAGTCGCAACAGCAACGGAAGAGGCGACG
AACGCGGGTTGAGGACATGAACCCGGCTGATGTGCACGTTTGCAGTTATA
GCGGGTGTGGAAGACGGTTTGCCAGGCGCTACAACCTCACGGTTCATGAA
AGGGCGCACCGCAACGAACATCCTTTCAGGTGTGATGTGCCTGGCTGCGG
AAAACCATTCATGTGGCAGTCAAGTTTGGTGCGCCATCTCCGCGTGCACA
ATAAGGGACGAAGGTCGGGTGGGCGGAAGCAACGTCGAAAGTCTGCCCTT
CAGCCACCCCCTCATTTGAAGAAGATTGACGAGCAGCAATACCCGGGCGC
CTGCTCTCCATCTGCCGTGAACCAGGGAAAGGGGTTTCGTCTGGTCGAGG
ACGTACGGGCATTAGTGAGCACCGTATGCCTTGACCAGACGCATGTTGCG
CTGTTGGGGCAGAAGAAACCTAAAATCAAAGAGGAGATCAACGTGAAGGC
TCACTTGGAAGACCGCTGGCACCAGTTTGCCCAACGTCAGCAGCAGCTAG
AGGTGATGTGGAACTCGCCTATCGTGATCAGCAGAGACATATTCTTGCGG
CTGTATGCCGCGATTAGTCCTGGCACTACGGAACCCCACTCTTAA
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Coding sequence (CDS) from alignment at tig00000237_pilon:105611..107305-

>Ggra1184.t1 ID=Ggra1184.t1|Name=Ggra1184.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1695bp|location=Sequence derived from alignment at tig00000237_pilon:105611..107305- (Gracilaria gracilis GNS1m male)
ATGTTCGGTTCATTTGAATGTCATGATGCGAATATCGCCACTACGGCCGG
GTTTCCCGGTGTGTACCCGTGTGCTGCCGTCGCTTTTCATTCCCCACCAA
CTGAGCAAGCGAAAACCCGTGGAACTTATAGGAAGATCAACAGAGGGCTC
GTGGAAGCGATTGTGGCCTCAGAGTGTGACAACGGGATTACTATTAGAGG
AGCGTCAGATGCCAAGGATGATACGATCAATGGTAATGGACGTGAAAACG
TGCCTGGTTCCTCCACGGCAGGACTGCCGAGCATTGCAGAACGATTTGAA
GAAGTAACAGAAGTAAGGAAGGTATGTGCTGAGAATGTTGGAAATGCCGG
AACGTGTGGGGCAGGGGATGAGGGGGTAAGCGATGAGCCGTTTGACCCCT
CAGGCCTGCCAGATGAAGATTATCTGGACCTCATGTTTATGCCTCTGCCC
AAAGAGGATCGAAGCAGATTGTCCGAAAGGAAGCCACTTACAAGCCTGTT
TTGCGAGCTGCTGCCGGAGGTCCCGGTAAACGAAACGGAAGGACTAGAAC
ATCAGGAGTGTGGGGAGACCATGGGAAACGACGAGTCAGTCCCCATGATT
ATCTCAGATGACGATTATCTTGACCAAATGTTCGCACCTCTTCCCCCAGA
GGACAAGGTAAGACTGTCATCGAACCAAACCAAAGAAAGTTTGTTTAAGG
AGCTCTTGGGTCAAGATTATGCTGCCGAAGGTCTTCGCGTTTATGAAGAA
AGACGCAAGGAAGACGTTCCGTCGAAGCCTCCAACTGGTGATGCTGATAC
CGTGGAACAGTGTGGAACGCAGATGGTTCAAAACGGGGCTCAGCGAGCAC
ACGACGTGAGGGTATGGACACAGGCTCCGAACTCGATGGCGCGCTCGACC
TTTCCGAGTCAGCCTCAGGTTGAAGTTCCCGCTGACCAGAACGCCCTGGA
TGAAAGCGCTCCTGAACTAAACGCTCCAATGCAACGAAGCCCAGATGATT
CTCCTAAACCAAAGAAGCGTGCAAAACGCAAGAGGTCGTCGAAGAAGGTT
GCGAAGCCCTCGCAAGAAGGGGAGTCGCAACAGCAACGGAAGAGGCGACG
AACGCGGGTTGAGGACATGAACCCGGCTGATGTGCACGTTTGCAGTTATA
GCGGGTGTGGAAGACGGTTTGCCAGGCGCTACAACCTCACGGTTCATGAA
AGGGCGCACCGCAACGAACATCCTTTCAGGTGTGATGTGCCTGGCTGCGG
AAAACCATTCATGTGGCAGTCAAGTTTGGTGCGCCATCTCCGCGTGCACA
ATAAGGGACGAAGGTCGGGTGGGCGGAAGCAACGTCGAAAGTCTGCCCTT
CAGCCACCCCCTCATTTGAAGAAGATTGACGAGCAGCAATACCCGGGCGC
CTGCTCTCCATCTGCCGTGAACCAGGGAAAGGGGTTTCGTCTGGTCGAGG
ACGTACGGGCATTAGTGAGCACCGTATGCCTTGACCAGACGCATGTTGCG
CTGTTGGGGCAGAAGAAACCTAAAATCAAAGAGGAGATCAACGTGAAGGC
TCACTTGGAAGACCGCTGGCACCAGTTTGCCCAACGTCAGCAGCAGCTAG
AGGTGATGTGGAACTCGCCTATCGTGATCAGCAGAGACATATTCTTGCGG
CTGTATGCCGCGATTAGTCCTGGCACTACGGAACCCCACTCTTAA
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