Ggra10242.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10242.t1
Unique NameGgra10242.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length173
Homology
BLAST of Ggra10242.t1 vs. uniprot
Match: A0A2V3IFS8 (Ribonuclease P protein subunit p20 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFS8_9FLOR)

HSP 1 Score: 119 bits (298), Expect = 4.460e-31
Identity = 73/171 (42.69%), Postives = 99/171 (57.89%), Query Frame = 0
Query:    1 MSHKRKRPTASSIDGADAASQPQPQPPPSQXXXXXXXXXXXXXXXXXSQAAQYRITRRVARSEQLGASSARAIHVSRRTNLHALHKRVQRLLTLQRAPVQLHAMGAAINKCCQLALALRRRARGALALQLRTSTQLVYDDYEPLVEGLDMFTKSRNVSAVHVTISRTALFV 171
            M+ KRKR T S+ D A  ++ P  QP                     +   +YR+  R+  +      +AR+IHVSR T    L+KRV+RLL     P+ LHAMGAA+   C+LALA++R A G L L   TSTQ VYDDY+PLVEG D  T+ RNVSA+ +TI +T+++V
Sbjct:    1 MAPKRKRVTQSAADSAPTSATPPQQP------------SALPLPHPTNDPTKYRVVTRLPNAHP---PNARSIHVSRSTKFAPLNKRVKRLLQTSSRPIVLHAMGAAMQHSCELALAIQRHAHGTLQLVPLTSTQQVYDDYQPLVEGYDEITRCRNVSAIRITIRKTSVYV 156          
BLAST of Ggra10242.t1 vs. uniprot
Match: A0A0N4UB86 (Ribonuclease P protein subunit p20 n=1 Tax=Dracunculus medinensis TaxID=318479 RepID=A0A0N4UB86_DRAME)

HSP 1 Score: 69.3 bits (168), Expect = 4.350e-12
Identity = 37/94 (39.36%), Postives = 61/94 (64.89%), Query Frame = 0
Query:   73 IHVSRRTNLHALHKRVQRLLTLQRAPVQLHAMGAAINKCCQLALALRRRARGALALQLRTSTQLVYDDYEPLVEGLDMFTKSRNVSAVHVTISR 166
            I+++R T++ A   R+++LL  +   V LH +GAA+N+   +AL ++R+   ++ L +RTST  V DD  PL + +D  T  RN+SAVH+ I+R
Sbjct:   30 IYITRHTSIGAQKARIEKLLDNKFNSVTLHGLGAAVNRTVNVALQIQRKLVDSVKLDVRTSTVRVTDDLFPLYDEVDFKTNVRNISAVHIKITR 123          
BLAST of Ggra10242.t1 vs. uniprot
Match: A0A6J1X652 (Ribonuclease P protein subunit p20 n=1 Tax=Galleria mellonella TaxID=7137 RepID=A0A6J1X652_GALME)

HSP 1 Score: 68.9 bits (167), Expect = 9.260e-12
Identity = 37/97 (38.14%), Postives = 58/97 (59.79%), Query Frame = 0
Query:   73 IHVSRRTNLHALHKRVQRLLTLQRAPVQLHAMGAAINKCCQLALALRRRARGALALQLRTSTQLVYDDYEPLVEGLDMFTKSRNVSAVHVTISRTAL 169
            I ++++TN  A  ++   LLT     + LH +GAAI +CC LAL L     G   L++ T T  + DD EPL++ LD  T+ R+ S+VH+ + R+A+
Sbjct:   42 IFITKKTNFKAQLEKCCDLLTKGEKEIILHGLGAAIQRCCNLALQLEILFSGTCQLEVNTGTVDLVDDLEPLIDDLDFGTQVRHTSSVHIRVFRSAM 138          
BLAST of Ggra10242.t1 vs. uniprot
Match: A0A194PWY6 (Ribonuclease P protein subunit p20 n=6 Tax=Papilio TaxID=7145 RepID=A0A194PWY6_PAPXU)

HSP 1 Score: 67.4 bits (163), Expect = 3.580e-11
Identity = 38/97 (39.18%), Postives = 57/97 (58.76%), Query Frame = 0
Query:   73 IHVSRRTNLHALHKRVQRLLTLQRAPVQLHAMGAAINKCCQLALALRRRARGALALQLRTSTQLVYDDYEPLVEGLDMFTKSRNVSAVHVTISRTAL 169
            I V+++TN  A   +   LLT     + LH +GAAI +CC LAL L     G   +++ T T  + DD EPLV+ LD  ++ R+ S++H+ I RTA+
Sbjct:   42 IFVTKKTNFKAQLDKCCDLLTRGEKEIILHGLGAAIQRCCNLALQLEILFSGTCQIEVNTGTVDLVDDLEPLVDDLDFGSQVRHSSSIHIRIFRTAM 138          
BLAST of Ggra10242.t1 vs. uniprot
Match: A0A3S2M433 (Alba domain-containing protein n=2 Tax=Crambidae TaxID=268499 RepID=A0A3S2M433_CHISP)

HSP 1 Score: 67.0 bits (162), Expect = 4.920e-11
Identity = 35/97 (36.08%), Postives = 56/97 (57.73%), Query Frame = 0
Query:   73 IHVSRRTNLHALHKRVQRLLTLQRAPVQLHAMGAAINKCCQLALALRRRARGALALQLRTSTQLVYDDYEPLVEGLDMFTKSRNVSAVHVTISRTAL 169
            + ++++TN  A   +   LLT     + LH +GAAI +CC LAL L     G   +++ T T  + DD EPL + LD  T+ R+ S++H+ + RTA+
Sbjct:   41 VFITKKTNFKAQLDKCCDLLTKGEKEIILHGLGAAIQRCCNLALQLESLFSGTCQIEVNTGTVDLVDDLEPLADDLDFGTQVRHSSSIHIRVFRTAM 137          
BLAST of Ggra10242.t1 vs. uniprot
Match: A0A4C2AAS7 (Ribonuclease P protein subunit p20 n=1 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C2AAS7_EUMVA)

HSP 1 Score: 65.9 bits (159), Expect = 1.350e-10
Identity = 37/97 (38.14%), Postives = 55/97 (56.70%), Query Frame = 0
Query:   73 IHVSRRTNLHALHKRVQRLLTLQRAPVQLHAMGAAINKCCQLALALRRRARGALALQLRTSTQLVYDDYEPLVEGLDMFTKSRNVSAVHVTISRTAL 169
            I ++++TN  A   +   LLT     + LH +GAAI +CC LAL L+    G   +++ T T  V DD EPL + LD   + R+ S++H+ I RT L
Sbjct:   42 IFITKKTNFKAQLDKCCDLLTKGENEIILHGLGAAIQRCCNLALQLQTLFAGTCQIEVNTGTVDVVDDLEPLTDDLDYGAQVRHSSSIHIRIFRTVL 138          
BLAST of Ggra10242.t1 vs. uniprot
Match: ribonuclease P protein subunit p20-like isoform X1 n=1 Tax=Aricia agestis TaxID=91739 RepID=UPI001C206E47 (ribonuclease P protein subunit p20-like isoform X1 n=1 Tax=Aricia agestis TaxID=91739 RepID=UPI001C206E47)

HSP 1 Score: 65.9 bits (159), Expect = 1.350e-10
Identity = 35/97 (36.08%), Postives = 57/97 (58.76%), Query Frame = 0
Query:   73 IHVSRRTNLHALHKRVQRLLTLQRAPVQLHAMGAAINKCCQLALALRRRARGALALQLRTSTQLVYDDYEPLVEGLDMFTKSRNVSAVHVTISRTAL 169
            I ++++TN  A   +   +L+     + LH +GAAI +CC LAL L     GA  +++ T T  + DD EPL + +D  T+ R+ S++H+ I RTA+
Sbjct:   41 IFITKKTNFKAQLDKCCDILSKGEKEIVLHGLGAAIQRCCNLALQLEILFSGACKIEVNTGTVDIVDDLEPLTDDVDYGTQVRHSSSIHIRIFRTAM 137          
BLAST of Ggra10242.t1 vs. uniprot
Match: ribonuclease P protein subunit p20-like isoform X1 n=2 Tax=Coliadinae TaxID=42450 RepID=UPI001E27B082 (ribonuclease P protein subunit p20-like isoform X1 n=2 Tax=Coliadinae TaxID=42450 RepID=UPI001E27B082)

HSP 1 Score: 65.9 bits (159), Expect = 1.410e-10
Identity = 37/97 (38.14%), Postives = 55/97 (56.70%), Query Frame = 0
Query:   73 IHVSRRTNLHALHKRVQRLLTLQRAPVQLHAMGAAINKCCQLALALRRRARGALALQLRTSTQLVYDDYEPLVEGLDMFTKSRNVSAVHVTISRTAL 169
            I V+++TN  A   +   LLT     + LH +GAAI +CC LAL L     G   +++ T T  + DD EPL + LD   + R+ S++H+ I RTA+
Sbjct:   42 IFVTKKTNFKAQLDKCCDLLTKGENDIILHGLGAAIQRCCNLALQLESLFAGTCQIEVNTGTVDLVDDLEPLTDDLDFGAQVRHSSSIHIRIFRTAM 138          
BLAST of Ggra10242.t1 vs. uniprot
Match: ribonuclease P protein subunit p20-like isoform X1 n=1 Tax=Vespula pensylvanica TaxID=30213 RepID=UPI001CBA0373 (ribonuclease P protein subunit p20-like isoform X1 n=1 Tax=Vespula pensylvanica TaxID=30213 RepID=UPI001CBA0373)

HSP 1 Score: 65.9 bits (159), Expect = 1.780e-10
Identity = 34/96 (35.42%), Postives = 59/96 (61.46%), Query Frame = 0
Query:   71 RAIHVSRRTNLHALHKRVQRLLTLQRAPVQLHAMGAAINKCCQLALALRRRARGALALQLRTSTQLVYDDYEPLVEGLDMFTKSRNVSAVHVTISR 166
            R I+V+++T+  A  K+ ++L  +  + + +H +GAAI + C LAL L+     +L L ++TST+ + DD+EPL +  D   K R  SA+H+ + R
Sbjct:   48 RDIYVTKKTDFKAQLKKCEKLFNIGISEIIIHGLGAAIKRACNLALQLKEIHHNSLDLDIKTSTEELIDDFEPLNDDYDYEMKIRRNSAIHIRVFR 143          
BLAST of Ggra10242.t1 vs. uniprot
Match: A0A212ENB4 (ribonuclease P protein subunit p20 n=4 Tax=Nymphalidae TaxID=33415 RepID=A0A212ENB4_DANPL)

HSP 1 Score: 64.3 bits (155), Expect = 5.220e-10
Identity = 36/97 (37.11%), Postives = 55/97 (56.70%), Query Frame = 0
Query:   73 IHVSRRTNLHALHKRVQRLLTLQRAPVQLHAMGAAINKCCQLALALRRRARGALALQLRTSTQLVYDDYEPLVEGLDMFTKSRNVSAVHVTISRTAL 169
            I V+++TN  A   +   LLT     + LH +GAAI +CC LAL L     G   +++ T T  + DD EPL + +D   + R+ S++H+ I RTA+
Sbjct:   41 IFVTKKTNFKAQLDKCCDLLTKGEKEIILHGLGAAIQRCCNLALQLEILFSGTCQIEVNTGTVDLIDDLEPLTDDVDFGAQVRHSSSIHIRIFRTAM 137          
The following BLAST results are available for this feature:
BLAST of Ggra10242.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A2V3IFS84.460e-3142.69Ribonuclease P protein subunit p20 n=1 Tax=Gracila... [more]
A0A0N4UB864.350e-1239.36Ribonuclease P protein subunit p20 n=1 Tax=Dracunc... [more]
A0A6J1X6529.260e-1238.14Ribonuclease P protein subunit p20 n=1 Tax=Galleri... [more]
A0A194PWY63.580e-1139.18Ribonuclease P protein subunit p20 n=6 Tax=Papilio... [more]
A0A3S2M4334.920e-1136.08Alba domain-containing protein n=2 Tax=Crambidae T... [more]
A0A4C2AAS71.350e-1038.14Ribonuclease P protein subunit p20 n=1 Tax=Eumeta ... [more]
ribonuclease P protein subunit p20-like isoform X1 n=1 Tax=Aricia agestis TaxID=91739 RepID=UPI001C206E471.350e-1036.08ribonuclease P protein subunit p20-like isoform X1... [more]
ribonuclease P protein subunit p20-like isoform X1 n=2 Tax=Coliadinae TaxID=42450 RepID=UPI001E27B0821.410e-1038.14ribonuclease P protein subunit p20-like isoform X1... [more]
ribonuclease P protein subunit p20-like isoform X1 n=1 Tax=Vespula pensylvanica TaxID=30213 RepID=UPI001CBA03731.780e-1035.42ribonuclease P protein subunit p20-like isoform X1... [more]
A0A212ENB45.220e-1037.11ribonuclease P protein subunit p20 n=4 Tax=Nymphal... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036882Alba-like domain superfamilyGENE3D3.30.110.20coord: 50..165
e-value: 6.5E-17
score: 63.5
IPR036882Alba-like domain superfamilySUPERFAMILY82704AlbA-likecoord: 72..166
IPR014612Ribonucleases P/MRP protein subunit Rpp20/Pop7PFAMPF12328Rpp20coord: 96..162
e-value: 1.7E-5
score: 24.8
IPR014612Ribonucleases P/MRP protein subunit Rpp20/Pop7PANTHERPTHR15314RIBONUCLEASE P PROTEIN SUBUNIT P20coord: 73..169
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:188387..189088 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10242.t1Ggra10242.t1Gracilaria gracilis GNS1m malemRNAtig00000016_pilon 188387..189088 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10242.t1 ID=Ggra10242.t1|Name=Ggra10242.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=173bp
MSHKRKRPTASSIDGADAASQPQPQPPPSQPQPPPSQPQPPPSPPPPSQA
AQYRITRRVARSEQLGASSARAIHVSRRTNLHALHKRVQRLLTLQRAPVQ
LHAMGAAINKCCQLALALRRRARGALALQLRTSTQLVYDDYEPLVEGLDM
FTKSRNVSAVHVTISRTALFVQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036882Alba-like_dom_sf
IPR014612Pop7/Rpp20