Ggra8114.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra8114.t1
Unique NameGgra8114.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length190
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000228_piloncontigtig00000228_pilon:67584..68153 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8114Ggra8114Gracilaria gracilis GNS1m malegenetig00000228_pilon 67584..68153 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8114.t1.stop1Ggra8114.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000228_pilon 67584..67586 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8114.t1.CDS1Ggra8114.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000228_pilon 67584..68153 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8114.t1.exon1Ggra8114.t1.exon1Gracilaria gracilis GNS1m maleexontig00000228_pilon 67584..68153 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8114.t1.start1Ggra8114.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000228_pilon 68151..68153 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8114.t1Ggra8114.t1Gracilaria gracilis GNS1m malepolypeptidetig00000228_pilon 67584..68153 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra8114.t1 ID=Ggra8114.t1|Name=Ggra8114.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=190bp
MEPSTAHSQLSSGEPSVGGIDRSRQESARLNLSSSFRPGRYSEQAFVNFR
NEMVDGCTEGIPELEGDPAARPGAVSARRSELFSRSRYASGELLVQCNSI
TLLAWEYIVRSRQSLPTRCEVVHRTQTRCIREAQGRSAIDGKEATVMNLT
VVVLEIPRDYEKTHRNTMNKLTGDWPPVVLDWSAFWKDG*
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spliced messenger RNA

>Ggra8114.t1 ID=Ggra8114.t1|Name=Ggra8114.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=570bp|location=Sequence derived from alignment at tig00000228_pilon:67584..68153- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGAACCATCCACAGCACATTCCCAGCTCTCATCAGGGGAACCATCTGT
TGGAGGTATCGATAGATCTCGCCAGGAGTCAGCGCGCCTGAATCTATCAA
GTTCATTTCGCCCAGGAAGGTACTCGGAACAGGCTTTCGTAAACTTTAGG
AATGAGATGGTAGACGGCTGTACTGAAGGTATACCGGAGCTTGAGGGTGA
TCCTGCTGCCAGACCAGGTGCTGTTAGTGCCCGCCGGAGTGAATTGTTTT
CTCGAAGTAGATACGCCTCAGGAGAGCTTCTTGTGCAATGTAATTCTATC
ACTTTGCTTGCCTGGGAATACATCGTTCGCTCTCGCCAGTCGCTGCCAAC
GCGATGTGAGGTTGTGCATCGTACCCAAACTCGATGTATTCGAGAAGCTC
AAGGTCGGAGTGCCATCGACGGCAAAGAAGCTACTGTAATGAATTTGACG
GTGGTTGTCCTGGAAATACCGAGGGACTACGAGAAAACACATCGGAATAC
AATGAACAAATTGACTGGCGACTGGCCGCCAGTCGTGTTGGATTGGAGCG
CGTTCTGGAAAGATGGGTAG
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protein sequence of Ggra8114.t1

>Ggra8114.t1 ID=Ggra8114.t1|Name=Ggra8114.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=190bp
MEPSTAHSQLSSGEPSVGGIDRSRQESARLNLSSSFRPGRYSEQAFVNFR
NEMVDGCTEGIPELEGDPAARPGAVSARRSELFSRSRYASGELLVQCNSI
TLLAWEYIVRSRQSLPTRCEVVHRTQTRCIREAQGRSAIDGKEATVMNLT
VVVLEIPRDYEKTHRNTMNKLTGDWPPVVLDWSAFWKDG*
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mRNA from alignment at tig00000228_pilon:67584..68153-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra8114.t1 ID=Ggra8114.t1|Name=Ggra8114.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=570bp|location=Sequence derived from alignment at tig00000228_pilon:67584..68153- (Gracilaria gracilis GNS1m male)
ATGGAACCATCCACAGCACATTCCCAGCTCTCATCAGGGGAACCATCTGT
TGGAGGTATCGATAGATCTCGCCAGGAGTCAGCGCGCCTGAATCTATCAA
GTTCATTTCGCCCAGGAAGGTACTCGGAACAGGCTTTCGTAAACTTTAGG
AATGAGATGGTAGACGGCTGTACTGAAGGTATACCGGAGCTTGAGGGTGA
TCCTGCTGCCAGACCAGGTGCTGTTAGTGCCCGCCGGAGTGAATTGTTTT
CTCGAAGTAGATACGCCTCAGGAGAGCTTCTTGTGCAATGTAATTCTATC
ACTTTGCTTGCCTGGGAATACATCGTTCGCTCTCGCCAGTCGCTGCCAAC
GCGATGTGAGGTTGTGCATCGTACCCAAACTCGATGTATTCGAGAAGCTC
AAGGTCGGAGTGCCATCGACGGCAAAGAAGCTACTGTAATGAATTTGACG
GTGGTTGTCCTGGAAATACCGAGGGACTACGAGAAAACACATCGGAATAC
AATGAACAAATTGACTGGCGACTGGCCGCCAGTCGTGTTGGATTGGAGCG
CGTTCTGGAAAGATGGGTAG
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Coding sequence (CDS) from alignment at tig00000228_pilon:67584..68153-

>Ggra8114.t1 ID=Ggra8114.t1|Name=Ggra8114.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=570bp|location=Sequence derived from alignment at tig00000228_pilon:67584..68153- (Gracilaria gracilis GNS1m male)
ATGGAACCATCCACAGCACATTCCCAGCTCTCATCAGGGGAACCATCTGT
TGGAGGTATCGATAGATCTCGCCAGGAGTCAGCGCGCCTGAATCTATCAA
GTTCATTTCGCCCAGGAAGGTACTCGGAACAGGCTTTCGTAAACTTTAGG
AATGAGATGGTAGACGGCTGTACTGAAGGTATACCGGAGCTTGAGGGTGA
TCCTGCTGCCAGACCAGGTGCTGTTAGTGCCCGCCGGAGTGAATTGTTTT
CTCGAAGTAGATACGCCTCAGGAGAGCTTCTTGTGCAATGTAATTCTATC
ACTTTGCTTGCCTGGGAATACATCGTTCGCTCTCGCCAGTCGCTGCCAAC
GCGATGTGAGGTTGTGCATCGTACCCAAACTCGATGTATTCGAGAAGCTC
AAGGTCGGAGTGCCATCGACGGCAAAGAAGCTACTGTAATGAATTTGACG
GTGGTTGTCCTGGAAATACCGAGGGACTACGAGAAAACACATCGGAATAC
AATGAACAAATTGACTGGCGACTGGCCGCCAGTCGTGTTGGATTGGAGCG
CGTTCTGGAAAGATGGGTAG
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