Ggra5985.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5985.t1
Unique NameGgra5985.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length141
Homology
BLAST of Ggra5985.t1 vs. uniprot
Match: A0A2V3IYZ1 (Phosphoglucan phosphatase LSF1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYZ1_9FLOR)

HSP 1 Score: 231 bits (588), Expect = 5.710e-76
Identity = 124/141 (87.94%), Postives = 130/141 (92.20%), Query Frame = 0
Query:    1 MFGGGRRIRVEPVKTEFVYADGAKDDVQLSGDWNDWKAIQMFHEGGGMWSVVTPVPPGPHEFKYIVDGEWKHSNRHPTIGIDDTSLNNVRVVLPQPDL-DEEDSPRAAARETKAXXXXXXXXXXXXXXAKAKRQMIGLFGK 140
            MFG  R+ +VEPVKTEFVYADGAKDDVQLSGDWNDWKAIQMFHEGGGMWSVVTPVPPGPHEFK+IVDGEWKHSNRHPTIGIDDTSLNNVRVVLPQPDL D  D+PR+ ARE   XXXXXXXXXXXXXXAKAKRQM+G FGK
Sbjct:    1 MFGSSRKAKVEPVKTEFVYADGAKDDVQLSGDWNDWKAIQMFHEGGGMWSVVTPVPPGPHEFKFIVDGEWKHSNRHPTIGIDDTSLNNVRVVLPQPDLNDTADTPRSGAREXXXXXXXXXXXXXXXXXAKAKRQMVGFFGK 141          
BLAST of Ggra5985.t1 vs. uniprot
Match: A0A7S0ZGK0 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZGK0_9RHOD)

HSP 1 Score: 190 bits (482), Expect = 9.780e-60
Identity = 89/111 (80.18%), Postives = 95/111 (85.59%), Query Frame = 0
Query:    7 RIRVEPVKTEFVYADGAKDDVQLSGDWNDWKAIQMFHEGGGMWSVVTPVPPGPHEFKYIVDGEWKHSNRHPTIGIDDTSLNNVRVVLPQPDLDEEDS----PRAAARETKA 113
            R+ V+ VK EFVYADGAKDDVQLSGDWNDWKAIQMFHEGGGMWSVVTPVPPGPHEFK+IVDGEWKHSNRHPTIGID+TSLNNVR VLP+PDL  E      PRA  R  +A
Sbjct:    9 RVAVDGVKVEFVYADGAKDDVQLSGDWNDWKAIQMFHEGGGMWSVVTPVPPGPHEFKFIVDGEWKHSNRHPTIGIDETSLNNVRFVLPEPDLSAERDGVADPRARPRGQRA 119          
BLAST of Ggra5985.t1 vs. uniprot
Match: uncharacterized protein LOC123543401 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D6066 (uncharacterized protein LOC123543401 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D6066)

HSP 1 Score: 188 bits (478), Expect = 5.140e-59
Identity = 87/101 (86.14%), Postives = 92/101 (91.09%), Query Frame = 0
Query:   14 KTEFVYADGAKDDVQLSGDWNDWKAIQMFHEGGGMWSVVTPVPPGPHEFKYIVDGEWKHSNRHPTIGIDDTSLNNVRVVLPQPDLDEEDSPRAAA-RETKA 113
            KTEFV+ADGA+DDVQLSGDWNDWKAIQMFHEGGGMWSVVTPVPPGPHEFK+IVDGEWKHSNRHPTIGIDDTSLNNVR VLPQPDLD +  P A   RE+ A
Sbjct:    4 KTEFVFADGARDDVQLSGDWNDWKAIQMFHEGGGMWSVVTPVPPGPHEFKFIVDGEWKHSNRHPTIGIDDTSLNNVRCVLPQPDLDGKGGPTAKGPRESTA 104          
BLAST of Ggra5985.t1 vs. uniprot
Match: A0A5J4Z5H3 (SNF1-related protein kinase regulatory subunit beta-2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z5H3_PORPP)

HSP 1 Score: 187 bits (474), Expect = 3.380e-58
Identity = 83/92 (90.22%), Postives = 88/92 (95.65%), Query Frame = 0
Query:   10 VEPVKTEFVYADGAKDDVQLSGDWNDWKAIQMFHEGGGMWSVVTPVPPGPHEFKYIVDGEWKHSNRHPTIGIDDTSLNNVRVVLPQPDLDEE 101
            V+ VK EFVYADGAKDDVQLSGDWNDWKAIQMFHEGGGMWSVVTPVPPGPHEFK+IVDGEWKHSNRHPTIGID+TSLNNVR VLP+PDL +E
Sbjct:   16 VDGVKVEFVYADGAKDDVQLSGDWNDWKAIQMFHEGGGMWSVVTPVPPGPHEFKFIVDGEWKHSNRHPTIGIDETSLNNVRYVLPEPDLSQE 107          
BLAST of Ggra5985.t1 vs. uniprot
Match: A0A1X6NSE9 (AMPK1_CBM domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NSE9_PORUM)

HSP 1 Score: 187 bits (474), Expect = 7.960e-58
Identity = 84/91 (92.31%), Postives = 87/91 (95.60%), Query Frame = 0
Query:    9 RVEPVKTEFVYADGAKDDVQLSGDWNDWKAIQMFHEGGGMWSVVTPVPPGPHEFKYIVDGEWKHSNRHPTIGIDDTSLNNVRVVLPQPDLD 99
            R E VKTEFVYADGAKDDVQLSGDWNDWKAIQ FHEGGGMWSVVTPVPPGPHEFK+IVDGEWKHSNRHPTIGIDDTSLNNVR VLP+P+LD
Sbjct:   11 REEGVKTEFVYADGAKDDVQLSGDWNDWKAIQCFHEGGGMWSVVTPVPPGPHEFKFIVDGEWKHSNRHPTIGIDDTSLNNVRYVLPEPELD 101          
BLAST of Ggra5985.t1 vs. uniprot
Match: A0A7S1XHG9 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XHG9_9RHOD)

HSP 1 Score: 184 bits (468), Expect = 1.500e-57
Identity = 82/94 (87.23%), Postives = 88/94 (93.62%), Query Frame = 0
Query:   10 VEPVKTEFVYADGAKDDVQLSGDWNDWKAIQMFHEGGGMWSVVTPVPPGPHEFKYIVDGEWKHSNRHPTIGIDDTSLNNVRVVLPQPDLDEEDS 103
            V+ VKTEF+YADGAKDDVQLSGDWNDWKAIQMFHEGGGMWSVVTPVPPGPHEFK+IVDGEWKHSNRHPTIGID+TSLNNVR VL +PDL   D+
Sbjct:   12 VDGVKTEFIYADGAKDDVQLSGDWNDWKAIQMFHEGGGMWSVVTPVPPGPHEFKFIVDGEWKHSNRHPTIGIDETSLNNVRYVLTEPDLSTSDT 105          
BLAST of Ggra5985.t1 vs. uniprot
Match: A0A1X6NM66 (AMPK1_CBM domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NM66_PORUM)

HSP 1 Score: 176 bits (445), Expect = 5.750e-54
Identity = 82/100 (82.00%), Postives = 87/100 (87.00%), Query Frame = 0
Query:    1 MFGGGRRIR--VEPVKTEFVYADGAKDDVQLSGDWNDWKAIQMFHEGGGMWSVVTPVPPGPHEFKYIVDGEWKHSNRHPTIGIDDTSLNNVRVVLPQPDL 98
            MFG    ++  +E VKTEFVYADGA DDVQLSGDWNDWKAIQMF E  GMWSVVTPVPPGPHEFK+IVDGEWKHSNRHPTIGIDD SLNNVR VLP+PDL
Sbjct:    1 MFGRTHAVKPKLEGVKTEFVYADGANDDVQLSGDWNDWKAIQMFCECAGMWSVVTPVPPGPHEFKFIVDGEWKHSNRHPTIGIDDNSLNNVRYVLPEPDL 100          
BLAST of Ggra5985.t1 vs. uniprot
Match: A0A2V3IX20 (Very-long-chain 3-oxoacyl-CoA reductase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX20_9FLOR)

HSP 1 Score: 182 bits (461), Expect = 9.420e-54
Identity = 87/140 (62.14%), Postives = 98/140 (70.00%), Query Frame = 0
Query:    3 GGGRRIRVEP--VKTEFVYADGAKDDVQLSGDWNDWKAIQMFHEGGGMWSVVTPVPPGPHEFKYIVDGEWKHSNRHPTIGIDDTSLNNVRVVLPQPDLDEEDSPRAAARETKAXXXXXXXXXXXXXXAKAKRQMIGLFGK 140
            GGG +    P  VKTEFV+ADGAKDDVQLSGDWNDWKAIQMFHEG G WSVVTPVPPGPHEFK+IVDGEWKHS RHPTIGID+TSLNNVR VLP+PDL   +  R+ +                   A  +++  G F K
Sbjct:  228 GGGSKKSAAPEGVKTEFVFADGAKDDVQLSGDWNDWKAIQMFHEGAGTWSVVTPVPPGPHEFKFIVDGEWKHSERHPTIGIDETSLNNVRYVLPEPDLGSSEDTRSKSGHRPQRRDSRASSASVDSSASRRKKGTGFFSK 367          
BLAST of Ggra5985.t1 vs. uniprot
Match: A0A7S3EHH0 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EHH0_9RHOD)

HSP 1 Score: 174 bits (441), Expect = 2.190e-53
Identity = 76/93 (81.72%), Postives = 85/93 (91.40%), Query Frame = 0
Query:    9 RVEPVKTEFVYADGAKDDVQLSGDWNDWKAIQMFHEGGGMWSVVTPVPPGPHEFKYIVDGEWKHSNRHPTIGIDDTSLNNVRVVLPQPDLDEE 101
            R + VK EFVY DGA+DDVQLSGDW DW+AIQMFHEGGGMWSVVTPVPPG HEFK+IVDGEWKHSNRHPTIGID+TSLNNVRVVLP+P ++ +
Sbjct:   11 REDGVKVEFVYCDGARDDVQLSGDWTDWRAIQMFHEGGGMWSVVTPVPPGAHEFKFIVDGEWKHSNRHPTIGIDETSLNNVRVVLPEPRIESQ 103          
BLAST of Ggra5985.t1 vs. uniprot
Match: A0A7S0BFF0 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BFF0_9RHOD)

HSP 1 Score: 174 bits (441), Expect = 3.200e-53
Identity = 76/93 (81.72%), Postives = 85/93 (91.40%), Query Frame = 0
Query:    9 RVEPVKTEFVYADGAKDDVQLSGDWNDWKAIQMFHEGGGMWSVVTPVPPGPHEFKYIVDGEWKHSNRHPTIGIDDTSLNNVRVVLPQPDLDEE 101
            R + VK EFVY DGA+DDVQLSGDW DW+AIQMFHEGGGMWSVVTPVPPG HEFK+IVDGEWKHSNRHPTIGID+TSLNNVRVVLP+P ++ +
Sbjct:   11 REDGVKVEFVYCDGARDDVQLSGDWTDWRAIQMFHEGGGMWSVVTPVPPGAHEFKFIVDGEWKHSNRHPTIGIDETSLNNVRVVLPEPRIESQ 103          
The following BLAST results are available for this feature:
BLAST of Ggra5985.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IYZ15.710e-7687.94Phosphoglucan phosphatase LSF1, chloroplastic n=1 ... [more]
A0A7S0ZGK09.780e-6080.18Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
uncharacterized protein LOC123543401 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D60665.140e-5986.14uncharacterized protein LOC123543401 n=1 Tax=Merce... [more]
A0A5J4Z5H33.380e-5890.22SNF1-related protein kinase regulatory subunit bet... [more]
A0A1X6NSE97.960e-5892.31AMPK1_CBM domain-containing protein n=1 Tax=Porphy... [more]
A0A7S1XHG91.500e-5787.23Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A1X6NM665.750e-5482.00AMPK1_CBM domain-containing protein n=1 Tax=Porphy... [more]
A0A2V3IX209.420e-5462.14Very-long-chain 3-oxoacyl-CoA reductase n=1 Tax=Gr... [more]
A0A7S3EHH02.190e-5381.72Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S0BFF03.200e-5381.72Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 6..94
e-value: 6.6E-20
score: 72.8
IPR032640AMP-activated protein kinase, glycogen-binding domainPFAMPF16561AMPK1_CBMcoord: 14..94
e-value: 1.5E-16
score: 60.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..127
NoneNo IPR availablePANTHERPTHR103435'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNITcoord: 13..129
NoneNo IPR availableCDDcd02859E_set_AMPKbeta_like_Ncoord: 14..92
e-value: 4.34317E-24
score: 86.884
IPR030077SNF1 protein kinase subunit beta-2/beta-3PANTHERPTHR10343:SF84ALICORN, ISOFORM Acoord: 13..129
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 16..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000227_piloncontigtig00000227_pilon:68182..68604 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5985.t1Ggra5985.t1Gracilaria gracilis GNS1m malemRNAtig00000227_pilon 68182..68604 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5985.t1 ID=Ggra5985.t1|Name=Ggra5985.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=141bp
MFGGGRRIRVEPVKTEFVYADGAKDDVQLSGDWNDWKAIQMFHEGGGMWS
VVTPVPPGPHEFKYIVDGEWKHSNRHPTIGIDDTSLNNVRVVLPQPDLDE
EDSPRAAARETKARARESRATARDSRAAKAKRQMIGLFGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR032640AMPK1_CBM
IPR030077SIP2/GAL83
IPR014756Ig_E-set