Ggra10219.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10219.t1
Unique NameGgra10219.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length497
Homology
BLAST of Ggra10219.t1 vs. uniprot
Match: A0A2V3ILG6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILG6_9FLOR)

HSP 1 Score: 518 bits (1335), Expect = 7.190e-178
Identity = 284/516 (55.04%), Postives = 360/516 (69.77%), Query Frame = 0
Query:    6 RAWRFLVPVPACCLLQAIFGLLYATGVFVALLDRPQYTLSIGVAGFFTSVGITVAGVAMNKLVPRDS--AQLAPVYVTLFGAAALAAQMLCALALALDHAPLLFFGAALYGMGCGCIYVASVDVLQAWVPEARGTITGVGMLCGAMGSLFGIEAFRALAASLSSPVHAIALVGFLSAALTFAAAPMVQRPPAGWHPTDELYHS--QQSLPLLSSTSARQSY---------CTLSVKDVLVDPSFYLLVVAFAGTVGPGFGIVLAFQEMAAQLYGADLQLANALFFWVTFSGIAGRLLSGIGVDALDDAGERHVGMLGAKRTNKLLLAAQLVALLTMPIVVRAGSIYGFMVAAAVVYITFSGGPVVTTCLVGGVFDQNNASLAFSLIAISIGLGDVFFSWVIARCSEASMLEAGSH---PALHVNDYNLFIVCSAIWSVAGYVATHYIRRCKALR---------DDVDTSRGRGISISADNVAISMGDVMAPFERAARRSADETTFLRSHVDMCCET 496
            R +R++VPVPAC LLQA+FGLLYA GVFVAL+  PQYTL+IG+A FF SVGIT++GV+M+KL       AQ APVY  L G+  L+ Q + ALALALD+  LL+  + LYG GCGCIYVASVDVLQAWVPE+RG ITGVGMLCGA GSLFGI  +RAL A+L +P+ A+A VG +SAAL+FAAAPM+++PPAGWHP  +L     +++ PLL + +A+++            +SV+D+L D SFY+LVVAFA TVGPGFG+VLA+Q M   ++GA +  AN LFFW+TFSG+AGRLL+GIGVDAL+        + G KRTN LLL  Q+ A  ++P  +RA  +Y F  A A++YITFSGGPVV  CLVG VFDQ NASLAFSL+AISIG GD+FFSWV+A CSE++      H   P  H +DYNLF+ C+ IWS+AG VATH+I RC  LR             +  G   S    +   S+ D+     RAA+RSADET  +R + DM  +T
Sbjct:   10 RDYRYVVPVPACFLLQALFGLLYAQGVFVALVHTPQYTLAIGLASFFVSVGITLSGVSMSKLASSSPSHAQSAPVYAALAGSVGLSGQTVLALALALDNVHLLYAASVLYGTGCGCIYVASVDVLQAWVPESRGFITGVGMLCGAAGSLFGIYIYRALVAALGAPIPAMAFVGAVSAALSFAAAPMLKKPPAGWHPARDLRAGGDEENAPLLITHAAQRALHSPPSAPHPAVISVRDILRDRSFYMLVVAFAATVGPGFGLVLAYQTMLIDMFGAAISEANNLFFWITFSGLAGRLLAGIGVDALESDVGSAPRLTGGKRTNMLLLLVQIAATASLPFFIRANMLYAFTAACALIYITFSGGPVVAACLVGAVFDQVNASLAFSLVAISIGAGDMFFSWVVAMCSESTAYPRVLHDRLPRFHASDYNLFLWCTVIWSLAGLVATHFISRCDKLRAQPAAESPAQSFSSPCGASCSRHRHSSVSSVEDLFRSLGRAAKRSADETN-IRVYTDMWSDT 524          
BLAST of Ggra10219.t1 vs. uniprot
Match: R7QEU2 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEU2_CHOCR)

HSP 1 Score: 387 bits (994), Expect = 1.540e-126
Identity = 216/460 (46.96%), Postives = 286/460 (62.17%), Query Frame = 0
Query:    2 NGDRRAWRFLVPVPACCLLQAIFGLLYATGVFVALLDRPQYTLSIGVAGFFTSVGITVAGVAMNKLVPRDSAQLAPVYVTLFGAAALAAQMLCALALALDHAPLLFFGAALYGMGCGCIYVASVDVLQAWVPEARGTITGVGMLCGAMGSLFGIEAFRALAASLSSPVHAIALVGFLSAALTFAAAPMVQRPPAGWHPTDEL----------------YHSQQSLPLL---SSTSARQSYCTLSVKDVLVDPSFYLLVVAFAGTVGPGFGIVLAFQEMAAQLYGADLQLANALFFWVTFSGIAGRLLSGIGVDALDDAGERHVGML-GAKRTNKLLLAAQLVALLTMPIVVRAGSIYGFMVAAAVVYITFSGGPVVTTCLVGGVFDQNNASLAFSLIAISIGLGDVFFSWVIARCSE--------ASMLEAGSHPALHVNDYNLFIVCSAIWSVAGYVAT 433
            + D    R+ V VPACCLLQ  FGL YA+GVF+A +D P +T SIGVAGF  +VGIT  GV MN+L+P   + LAPVY+ + GA AL AQ+L   A+A D++ LL   A   G+G G IY+ASVDVLQ+WVPEA G I G+GMLCG +GSL GI     L   L  P+ A+ + G ++  +  A+A +V+RPP  W PT  +                 HS   L  L   S+    ++   L+VKD+L D SFYLL+VAFA TVGPGFG VLAFQ+MA  L+G  +  AN L+F VTF+G+AGRL++G  VD L     R    L GA++TN +LL  Q +ALL +P+ +  G +  F VA+A VY+TFSGG VV  C+V G++   NASL FSL+A+SIG GDVFFSW++A C +        AS +  G     H  DYN+F++   +WS+ G  A+
Sbjct:   28 SSDLTTRRWYVQVPACCLLQITFGLFYASGVFIAEIDSPLFTFSIGVAGFSIAVGITFFGVLMNRLIPTSHSVLAPVYIAVIGALALFAQVLMPHAVASDNSVLLLASAVAVGLGSGAIYLASVDVLQSWVPEAPGVIMGIGMLCGGVGSLIGIRVDIVLTQLLGGPLPALGVSGAIAGVVALASAVLVRRPPPDWTPTSSVTASGAPVMDEECGTVSLHSDSELAALLPLSTLELMRNCPQLTVKDILTDRSFYLLLVAFAATVGPGFGFVLAFQKMAYTLFGVSMAEANRLYFSVTFAGVAGRLVTGWTVDKLQSLDSRDEDSLYGARKTNMILLVGQTIALLAIPVSIHNGHVGAFTVASAAVYVTFSGGVVVAACMVRGIYMPRNASLGFSLVAVSIGFGDVFFSWIVAWCGDLSDVEKSYASAISPGVTSEAHQGDYNIFLLFGLLWSLCGLAAS 487          
BLAST of Ggra10219.t1 vs. uniprot
Match: OFA family MFS transporter n=1 Tax=Brachybacterium sacelli TaxID=173364 RepID=UPI001AE14C0D (OFA family MFS transporter n=1 Tax=Brachybacterium sacelli TaxID=173364 RepID=UPI001AE14C0D)

HSP 1 Score: 61.6 bits (148), Expect = 1.860e-6
Identity = 102/449 (22.72%), Postives = 169/449 (37.64%), Query Frame = 0
Query:    9 RFLVPVPACCLLQAIFGLLYATGVFVALLDRPQYTLSIGVAGFFT------SVGITVAGVAMNKLVPRDSAQLAPVYVTLFGAAALAAQMLCALALALDHAPLLFFG-AALYGMGCGCIYVASVDVLQAWVPEARGTITGVGMLCGAMGSLFGIEAFRALAASLSS---PVHAIALVGFLSAALTFAA---------APMVQRPPAGWHPTDELYHSQQSLPLLSSTSARQSYCTLSVKDVLVDPSFYLLVVAFAGTVGPGFGIVLAFQEMAAQLYGADLQLANALFFWVTFSGIAGRLLSGIGVDALDDAGERHVGMLGAKRTNKLLLAAQLVALLTMPIVVRAGSIYGFMVAAAVVYITFSGGPVVTTCLVGGVFDQNNASLA--FSLIAISIGLGDVFFSWVIARCSEASMLEAGSHPALHVNDYNLFIVCSAIWSVAGYVATHYI 436
            R+ +P PA   +    G +YA  VF    +       + V   F+       +   VAG  + ++ PR +   A  +  L         ++ AL +A     L++ G   + G+G G  Y+A V  L  W P+  G  TG+ ++    G+L    A   L A       P H +A  G     LT  A         A +++ P   W PT   Y      P  S+T A ++  ++S K  +  P F+LL +     V  G GI+     M    +G     A      ++ + +AGR +     D L           G K    L LA    A+L + I     S     V +A+V I+F GG           F    A L   F +  +    G +  +W  A  +   ++ +         +  + +   ++W +AG +A  ++
Sbjct:   17 RWFIP-PAALAIHLCIGQVYAFSVFKTPFENRFDVGEVAVGWIFSLAIAMLGISSAVAGTWVERVGPRMAMVAAGGFWVL-------GFLVSALGIASGQLWLVYLGYGVIGGIGLGIGYIAPVSTLMKWFPDRPGLATGLAIMGFGGGALIASPASNKLMALFGGGQEPAHLVA--GLTPTFLTLGACYLLAIALGAYVIRLPHPDWTPTG--YD-----PATSTTGAARAAGSVSAKQSIRTPQFWLLWIVLFTNVTAGIGILENASPMITDGFGVAAAAAAGFVGLLSLANMAGRFVWSTTSDYL-----------GRKLNYALYLAVG--AILYVVIASLGSSSLAVFVLSALVIISFYGGG----------FSTVPAYLRDLFGVYQVGAIHGRLLTAWSAAGIAGPLLVNSIVESQSAAGNSGMDLYRLSMWLMAGILAVGFV 425          
The following BLAST results are available for this feature:
BLAST of Ggra10219.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3ILG67.190e-17855.04Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QEU21.540e-12646.96Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
OFA family MFS transporter n=1 Tax=Brachybacterium sacelli TaxID=173364 RepID=UPI001AE14C0D1.860e-622.72OFA family MFS transporter n=1 Tax=Brachybacterium... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 42..386
e-value: 1.1E-8
score: 34.5
IPR036259MFS transporter superfamilyGENE3D1.20.1250.20MFS general substrate transporter like domainscoord: 3..194
e-value: 1.1E-6
score: 29.6
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 8..438
NoneNo IPR availablePANTHERPTHR11360MONOCARBOXYLATE TRANSPORTERcoord: 15..421
NoneNo IPR availablePANTHERPTHR11360:SF3OXALATE/FORMATE ANTIPORTERcoord: 15..421
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 65..75
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 168..187
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 100..104
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 188..235
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 338..366
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 315..332
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 333..337
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..36
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 395..413
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 256..274
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 414..433
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 367..372
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..41
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 236..255
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..64
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 76..99
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 275..294
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 434..496
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 163..167
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 105..128
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 140..162
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 129..139
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 295..314
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 373..394
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 414..436
NoneNo IPR availableTMHMMTMhelixcoord: 235..257
NoneNo IPR availableTMHMMTMhelixcoord: 105..124
NoneNo IPR availableTMHMMTMhelixcoord: 44..63
NoneNo IPR availableTMHMMTMhelixcoord: 168..190
NoneNo IPR availableTMHMMTMhelixcoord: 139..161
NoneNo IPR availableTMHMMTMhelixcoord: 343..365
NoneNo IPR availableTMHMMTMhelixcoord: 78..100
NoneNo IPR availableTMHMMTMhelixcoord: 316..338
NoneNo IPR availableTMHMMTMhelixcoord: 372..394

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:124028..125518 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10219.t1Ggra10219.t1Gracilaria gracilis GNS1m malemRNAtig00000016_pilon 124028..125518 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10219.t1 ID=Ggra10219.t1|Name=Ggra10219.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=497bp
MNGDRRAWRFLVPVPACCLLQAIFGLLYATGVFVALLDRPQYTLSIGVAG
FFTSVGITVAGVAMNKLVPRDSAQLAPVYVTLFGAAALAAQMLCALALAL
DHAPLLFFGAALYGMGCGCIYVASVDVLQAWVPEARGTITGVGMLCGAMG
SLFGIEAFRALAASLSSPVHAIALVGFLSAALTFAAAPMVQRPPAGWHPT
DELYHSQQSLPLLSSTSARQSYCTLSVKDVLVDPSFYLLVVAFAGTVGPG
FGIVLAFQEMAAQLYGADLQLANALFFWVTFSGIAGRLLSGIGVDALDDA
GERHVGMLGAKRTNKLLLAAQLVALLTMPIVVRAGSIYGFMVAAAVVYIT
FSGGPVVTTCLVGGVFDQNNASLAFSLIAISIGLGDVFFSWVIARCSEAS
MLEAGSHPALHVNDYNLFIVCSAIWSVAGYVATHYIRRCKALRDDVDTSR
GRGISISADNVAISMGDVMAPFERAARRSADETTFLRSHVDMCCET*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR036259MFS_trans_sf