Ggra10793.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10793.t1
Unique NameGgra10793.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length580
Homology
The following BLAST results are available for this feature:
BLAST of Ggra10793.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 560..579
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 563..579
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 225..266
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 73..90
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 40..72
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 91..467
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 492..579
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..39
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 468..491
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availableTMHMMTMhelixcoord: 20..39
NoneNo IPR availableTMHMMTMhelixcoord: 69..88
NoneNo IPR availableTMHMMTMhelixcoord: 468..490

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000225_piloncontigtig00000225_pilon:94143..95882 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10793.t1Ggra10793.t1Gracilaria gracilis GNS1m malemRNAtig00000225_pilon 94143..95882 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10793.t1 ID=Ggra10793.t1|Name=Ggra10793.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=580bp
MLKIPLSVGTFNAIKYAVEELVIIYIFQRCIRIISGIWIRRRLRKKTYVL
GGTPILDELALQPNLGRTGLGRFFLLVAFIIMVHGAALFLEFSTDSTVEV
EYAGIGMIRARTSVFDSASYEKKASISKIYRQGVDSVVVGGNSGNEYRAV
ELGGSRINRYSEDYSNVSLYSYAGMPDCTGQRYCLRRVTMKVEQARVIAR
SDGRLNLRFGSITSVTASIKAYSEQDEDEMAPPTFPAAEKLPSVSSEAGN
DAFDPANEGLEASGPDPPVIPEPGDNVFEAGLLDPGSSIFEAGSIFDTGG
LIGIPNIADVVRDVITDKEETDAEDLGVRKLLCINDIRGISTDERAICLS
EHSGAPRSESSCDGLPMQQKPVYLKVFGTREGFENFTVGNTYQSKSFGAA
LFDVCGNWSVGIDAMILAAQVISFRNTIDDPIDLRSLAEVISISSVGDFG
NGTQARESRMVAFVTRPIVYLPALAVYGALAFVAILVVLVSHGFARGNSF
RLNDALVYAAVLSNHIDGMERDGTDCDSTREVKSIALYTVEDGLSSHLGP
APASWAPHVHGNEIRGTESKTGKTGEELL*
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