Ggra10793.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10793.t1
Unique NameGgra10793.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length580
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000225_piloncontigtig00000225_pilon:94143..95882 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10793Ggra10793Gracilaria gracilis GNS1m malegenetig00000225_pilon 94143..95882 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10793.t1.stop1Ggra10793.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000225_pilon 94143..94145 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10793.t1.CDS1Ggra10793.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000225_pilon 94143..95882 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10793.t1.exon1Ggra10793.t1.exon1Gracilaria gracilis GNS1m maleexontig00000225_pilon 94143..95882 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10793.t1.start1Ggra10793.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000225_pilon 95880..95882 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10793.t1Ggra10793.t1Gracilaria gracilis GNS1m malepolypeptidetig00000225_pilon 94143..95882 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10793.t1 ID=Ggra10793.t1|Name=Ggra10793.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=580bp
MLKIPLSVGTFNAIKYAVEELVIIYIFQRCIRIISGIWIRRRLRKKTYVL
GGTPILDELALQPNLGRTGLGRFFLLVAFIIMVHGAALFLEFSTDSTVEV
EYAGIGMIRARTSVFDSASYEKKASISKIYRQGVDSVVVGGNSGNEYRAV
ELGGSRINRYSEDYSNVSLYSYAGMPDCTGQRYCLRRVTMKVEQARVIAR
SDGRLNLRFGSITSVTASIKAYSEQDEDEMAPPTFPAAEKLPSVSSEAGN
DAFDPANEGLEASGPDPPVIPEPGDNVFEAGLLDPGSSIFEAGSIFDTGG
LIGIPNIADVVRDVITDKEETDAEDLGVRKLLCINDIRGISTDERAICLS
EHSGAPRSESSCDGLPMQQKPVYLKVFGTREGFENFTVGNTYQSKSFGAA
LFDVCGNWSVGIDAMILAAQVISFRNTIDDPIDLRSLAEVISISSVGDFG
NGTQARESRMVAFVTRPIVYLPALAVYGALAFVAILVVLVSHGFARGNSF
RLNDALVYAAVLSNHIDGMERDGTDCDSTREVKSIALYTVEDGLSSHLGP
APASWAPHVHGNEIRGTESKTGKTGEELL*
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spliced messenger RNA

>Ggra10793.t1 ID=Ggra10793.t1|Name=Ggra10793.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1740bp|location=Sequence derived from alignment at tig00000225_pilon:94143..95882- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCTGAAAATTCCCCTCTCCGTTGGCACGTTCAATGCAATCAAGTACGC
TGTTGAGGAGCTGGTCATTATCTACATCTTCCAGAGATGCATTCGAATTA
TTTCCGGAATTTGGATTAGGAGGCGGCTACGAAAGAAGACTTATGTTCTG
GGAGGAACGCCTATTCTTGACGAACTTGCTCTTCAGCCCAATTTAGGAAG
GACGGGTCTAGGTCGTTTCTTTCTACTGGTGGCGTTCATCATTATGGTTC
ATGGCGCTGCTCTTTTCCTAGAGTTCAGTACTGACAGTACTGTAGAAGTT
GAGTACGCTGGCATTGGAATGATACGTGCACGAACGTCTGTTTTCGACTC
TGCTTCGTACGAAAAGAAGGCTTCCATTTCGAAGATTTATCGTCAAGGTG
TAGACTCCGTTGTTGTTGGTGGGAATTCTGGGAACGAGTACAGGGCTGTG
GAACTGGGTGGGAGCCGTATCAACCGATACTCCGAAGATTACAGCAACGT
CAGTTTGTATTCATACGCAGGTATGCCCGATTGTACGGGCCAGCGGTATT
GTTTACGACGGGTTACCATGAAGGTGGAACAAGCACGAGTGATTGCCAGA
TCTGACGGTAGGTTGAATTTACGTTTCGGGAGTATCACCTCCGTAACAGC
ATCAATCAAAGCGTATTCTGAACAGGACGAAGATGAAATGGCTCCTCCAA
CTTTCCCGGCTGCTGAAAAGTTACCCTCTGTATCATCCGAGGCTGGAAAC
GATGCATTCGACCCTGCAAATGAGGGTCTCGAAGCCTCCGGCCCTGACCC
ACCGGTAATACCAGAGCCCGGAGACAATGTATTCGAGGCTGGATTACTCG
ATCCCGGAAGTAGTATATTCGAGGCTGGAAGTATATTTGATACTGGAGGC
CTCATAGGAATTCCTAATATCGCAGATGTAGTCCGAGATGTGATCACAGA
CAAAGAAGAAACCGATGCTGAAGATCTCGGCGTGCGGAAGCTCCTTTGCA
TAAACGACATTCGCGGGATTTCAACTGACGAAAGAGCGATATGCCTGTCA
GAACATTCTGGTGCGCCACGTTCGGAGAGCTCTTGTGATGGTCTCCCAAT
GCAACAGAAACCGGTGTACTTGAAAGTTTTCGGAACTCGAGAAGGGTTTG
AAAATTTTACGGTCGGAAACACATATCAATCGAAGTCGTTCGGAGCGGCA
CTATTTGATGTTTGTGGCAACTGGAGTGTTGGGATCGATGCGATGATTCT
CGCAGCTCAAGTAATCAGCTTCAGAAACACCATCGATGATCCTATTGACC
TCAGGTCGTTGGCTGAAGTGATCTCCATATCTTCGGTGGGCGATTTTGGG
AACGGCACACAAGCCCGAGAGAGTAGAATGGTGGCATTCGTAACAAGGCC
CATCGTGTATTTGCCCGCTCTAGCTGTTTACGGAGCACTCGCATTCGTGG
CCATACTAGTGGTTCTAGTTTCTCACGGGTTTGCGAGGGGAAACAGCTTT
CGTCTGAATGATGCTTTGGTGTACGCCGCCGTGTTGTCGAACCATATTGA
TGGCATGGAAAGGGACGGCACTGACTGTGACAGCACTCGCGAGGTGAAAA
GCATTGCCCTTTACACAGTGGAAGATGGGTTGAGCAGTCACCTGGGACCT
GCGCCGGCGTCGTGGGCTCCACACGTTCACGGGAACGAGATTCGTGGTAC
GGAATCTAAAACTGGGAAAACAGGCGAAGAACTTCTTTGA
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protein sequence of Ggra10793.t1

>Ggra10793.t1 ID=Ggra10793.t1|Name=Ggra10793.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=580bp
MLKIPLSVGTFNAIKYAVEELVIIYIFQRCIRIISGIWIRRRLRKKTYVL
GGTPILDELALQPNLGRTGLGRFFLLVAFIIMVHGAALFLEFSTDSTVEV
EYAGIGMIRARTSVFDSASYEKKASISKIYRQGVDSVVVGGNSGNEYRAV
ELGGSRINRYSEDYSNVSLYSYAGMPDCTGQRYCLRRVTMKVEQARVIAR
SDGRLNLRFGSITSVTASIKAYSEQDEDEMAPPTFPAAEKLPSVSSEAGN
DAFDPANEGLEASGPDPPVIPEPGDNVFEAGLLDPGSSIFEAGSIFDTGG
LIGIPNIADVVRDVITDKEETDAEDLGVRKLLCINDIRGISTDERAICLS
EHSGAPRSESSCDGLPMQQKPVYLKVFGTREGFENFTVGNTYQSKSFGAA
LFDVCGNWSVGIDAMILAAQVISFRNTIDDPIDLRSLAEVISISSVGDFG
NGTQARESRMVAFVTRPIVYLPALAVYGALAFVAILVVLVSHGFARGNSF
RLNDALVYAAVLSNHIDGMERDGTDCDSTREVKSIALYTVEDGLSSHLGP
APASWAPHVHGNEIRGTESKTGKTGEELL*
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mRNA from alignment at tig00000225_pilon:94143..95882-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10793.t1 ID=Ggra10793.t1|Name=Ggra10793.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1740bp|location=Sequence derived from alignment at tig00000225_pilon:94143..95882- (Gracilaria gracilis GNS1m male)
ATGCTGAAAATTCCCCTCTCCGTTGGCACGTTCAATGCAATCAAGTACGC
TGTTGAGGAGCTGGTCATTATCTACATCTTCCAGAGATGCATTCGAATTA
TTTCCGGAATTTGGATTAGGAGGCGGCTACGAAAGAAGACTTATGTTCTG
GGAGGAACGCCTATTCTTGACGAACTTGCTCTTCAGCCCAATTTAGGAAG
GACGGGTCTAGGTCGTTTCTTTCTACTGGTGGCGTTCATCATTATGGTTC
ATGGCGCTGCTCTTTTCCTAGAGTTCAGTACTGACAGTACTGTAGAAGTT
GAGTACGCTGGCATTGGAATGATACGTGCACGAACGTCTGTTTTCGACTC
TGCTTCGTACGAAAAGAAGGCTTCCATTTCGAAGATTTATCGTCAAGGTG
TAGACTCCGTTGTTGTTGGTGGGAATTCTGGGAACGAGTACAGGGCTGTG
GAACTGGGTGGGAGCCGTATCAACCGATACTCCGAAGATTACAGCAACGT
CAGTTTGTATTCATACGCAGGTATGCCCGATTGTACGGGCCAGCGGTATT
GTTTACGACGGGTTACCATGAAGGTGGAACAAGCACGAGTGATTGCCAGA
TCTGACGGTAGGTTGAATTTACGTTTCGGGAGTATCACCTCCGTAACAGC
ATCAATCAAAGCGTATTCTGAACAGGACGAAGATGAAATGGCTCCTCCAA
CTTTCCCGGCTGCTGAAAAGTTACCCTCTGTATCATCCGAGGCTGGAAAC
GATGCATTCGACCCTGCAAATGAGGGTCTCGAAGCCTCCGGCCCTGACCC
ACCGGTAATACCAGAGCCCGGAGACAATGTATTCGAGGCTGGATTACTCG
ATCCCGGAAGTAGTATATTCGAGGCTGGAAGTATATTTGATACTGGAGGC
CTCATAGGAATTCCTAATATCGCAGATGTAGTCCGAGATGTGATCACAGA
CAAAGAAGAAACCGATGCTGAAGATCTCGGCGTGCGGAAGCTCCTTTGCA
TAAACGACATTCGCGGGATTTCAACTGACGAAAGAGCGATATGCCTGTCA
GAACATTCTGGTGCGCCACGTTCGGAGAGCTCTTGTGATGGTCTCCCAAT
GCAACAGAAACCGGTGTACTTGAAAGTTTTCGGAACTCGAGAAGGGTTTG
AAAATTTTACGGTCGGAAACACATATCAATCGAAGTCGTTCGGAGCGGCA
CTATTTGATGTTTGTGGCAACTGGAGTGTTGGGATCGATGCGATGATTCT
CGCAGCTCAAGTAATCAGCTTCAGAAACACCATCGATGATCCTATTGACC
TCAGGTCGTTGGCTGAAGTGATCTCCATATCTTCGGTGGGCGATTTTGGG
AACGGCACACAAGCCCGAGAGAGTAGAATGGTGGCATTCGTAACAAGGCC
CATCGTGTATTTGCCCGCTCTAGCTGTTTACGGAGCACTCGCATTCGTGG
CCATACTAGTGGTTCTAGTTTCTCACGGGTTTGCGAGGGGAAACAGCTTT
CGTCTGAATGATGCTTTGGTGTACGCCGCCGTGTTGTCGAACCATATTGA
TGGCATGGAAAGGGACGGCACTGACTGTGACAGCACTCGCGAGGTGAAAA
GCATTGCCCTTTACACAGTGGAAGATGGGTTGAGCAGTCACCTGGGACCT
GCGCCGGCGTCGTGGGCTCCACACGTTCACGGGAACGAGATTCGTGGTAC
GGAATCTAAAACTGGGAAAACAGGCGAAGAACTTCTTTGA
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Coding sequence (CDS) from alignment at tig00000225_pilon:94143..95882-

>Ggra10793.t1 ID=Ggra10793.t1|Name=Ggra10793.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1740bp|location=Sequence derived from alignment at tig00000225_pilon:94143..95882- (Gracilaria gracilis GNS1m male)
ATGCTGAAAATTCCCCTCTCCGTTGGCACGTTCAATGCAATCAAGTACGC
TGTTGAGGAGCTGGTCATTATCTACATCTTCCAGAGATGCATTCGAATTA
TTTCCGGAATTTGGATTAGGAGGCGGCTACGAAAGAAGACTTATGTTCTG
GGAGGAACGCCTATTCTTGACGAACTTGCTCTTCAGCCCAATTTAGGAAG
GACGGGTCTAGGTCGTTTCTTTCTACTGGTGGCGTTCATCATTATGGTTC
ATGGCGCTGCTCTTTTCCTAGAGTTCAGTACTGACAGTACTGTAGAAGTT
GAGTACGCTGGCATTGGAATGATACGTGCACGAACGTCTGTTTTCGACTC
TGCTTCGTACGAAAAGAAGGCTTCCATTTCGAAGATTTATCGTCAAGGTG
TAGACTCCGTTGTTGTTGGTGGGAATTCTGGGAACGAGTACAGGGCTGTG
GAACTGGGTGGGAGCCGTATCAACCGATACTCCGAAGATTACAGCAACGT
CAGTTTGTATTCATACGCAGGTATGCCCGATTGTACGGGCCAGCGGTATT
GTTTACGACGGGTTACCATGAAGGTGGAACAAGCACGAGTGATTGCCAGA
TCTGACGGTAGGTTGAATTTACGTTTCGGGAGTATCACCTCCGTAACAGC
ATCAATCAAAGCGTATTCTGAACAGGACGAAGATGAAATGGCTCCTCCAA
CTTTCCCGGCTGCTGAAAAGTTACCCTCTGTATCATCCGAGGCTGGAAAC
GATGCATTCGACCCTGCAAATGAGGGTCTCGAAGCCTCCGGCCCTGACCC
ACCGGTAATACCAGAGCCCGGAGACAATGTATTCGAGGCTGGATTACTCG
ATCCCGGAAGTAGTATATTCGAGGCTGGAAGTATATTTGATACTGGAGGC
CTCATAGGAATTCCTAATATCGCAGATGTAGTCCGAGATGTGATCACAGA
CAAAGAAGAAACCGATGCTGAAGATCTCGGCGTGCGGAAGCTCCTTTGCA
TAAACGACATTCGCGGGATTTCAACTGACGAAAGAGCGATATGCCTGTCA
GAACATTCTGGTGCGCCACGTTCGGAGAGCTCTTGTGATGGTCTCCCAAT
GCAACAGAAACCGGTGTACTTGAAAGTTTTCGGAACTCGAGAAGGGTTTG
AAAATTTTACGGTCGGAAACACATATCAATCGAAGTCGTTCGGAGCGGCA
CTATTTGATGTTTGTGGCAACTGGAGTGTTGGGATCGATGCGATGATTCT
CGCAGCTCAAGTAATCAGCTTCAGAAACACCATCGATGATCCTATTGACC
TCAGGTCGTTGGCTGAAGTGATCTCCATATCTTCGGTGGGCGATTTTGGG
AACGGCACACAAGCCCGAGAGAGTAGAATGGTGGCATTCGTAACAAGGCC
CATCGTGTATTTGCCCGCTCTAGCTGTTTACGGAGCACTCGCATTCGTGG
CCATACTAGTGGTTCTAGTTTCTCACGGGTTTGCGAGGGGAAACAGCTTT
CGTCTGAATGATGCTTTGGTGTACGCCGCCGTGTTGTCGAACCATATTGA
TGGCATGGAAAGGGACGGCACTGACTGTGACAGCACTCGCGAGGTGAAAA
GCATTGCCCTTTACACAGTGGAAGATGGGTTGAGCAGTCACCTGGGACCT
GCGCCGGCGTCGTGGGCTCCACACGTTCACGGGAACGAGATTCGTGGTAC
GGAATCTAAAACTGGGAAAACAGGCGAAGAACTTCTTTGA
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