Ggra10794.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10794.t1
Unique NameGgra10794.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length380
Homology
BLAST of Ggra10794.t1 vs. uniprot
Match: A0A2V3IFN8 (Glutaredoxin 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFN8_9FLOR)

HSP 1 Score: 296 bits (758), Expect = 1.530e-96
Identity = 137/201 (68.16%), Postives = 167/201 (83.08%), Query Frame = 0
Query:  179 NVKHNLVWLANDDVATPTALVGRKIVPIFQPLGAGADALAESLDICAAVDADARFGQPGLLRPLSARADVAQWMEQLAMPMRRLTRVRFSRAPLPEFVFADAREAYVRNHPLKEPAEYEQNWARSDEYIAPIQARIQELADMIHSPYHCSPGGLSYDDIVLFPRLRAMTIIKGLTLPSAIRDYLEYHSAASEIPLYDYCAM 379
            N+K+NLV+LANDDV TPTALVGRK+VPIFQP G G  A  ESLDIC  VD D RFG PGLL+  + R D+A+WM++LAMPMRRL+RVRFSRAPLPEFVF +ARE Y+RNHPL +P +YE N+ RS EYI  +Q R+ ELA+MI+SP HCSP GLSYDDIVLFPRLR +TI+KGL LP  +R+Y+E+ +AA+EIP+YDYCA+
Sbjct:   38 NIKYNLVFLANDDVTTPTALVGRKVVPIFQPQGTGGPAQPESLDICKHVDNDPRFGAPGLLKSATPRDDIAKWMDELAMPMRRLSRVRFSRAPLPEFVFQEARETYIRNHPLSDPGDYEDNFDRSTEYITQVQERLDELAEMIYSPEHCSPHGLSYDDIVLFPRLRTLTIVKGLVLPKRLREYVEFQAAAAEIPVYDYCAI 238          
BLAST of Ggra10794.t1 vs. uniprot
Match: A0A2V3IZ39 (Glutaredoxin 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ39_9FLOR)

HSP 1 Score: 256 bits (653), Expect = 2.100e-80
Identity = 118/201 (58.71%), Postives = 150/201 (74.63%), Query Frame = 0
Query:  179 NVKHNLVWLANDDVATPTALVGRKIVPIFQPLGAGADALAESLDICAAVDADARFGQPGLLRPLSARADVAQWMEQLAMPMRRLTRVRFSRAPLPEFVFADAREAYVRNHPLKEPAEYEQNWARSDEYIAPIQARIQELADMIHSPYHCSPGGLSYDDIVLFPRLRAMTIIKGLTLPSAIRDYLEYHSAASEIPLYDYCAM 379
            N+K+NLV+LANDDV TPT LVGRKI PIFQP GA   A  ESLDIC  +D D+RFG P LL P   R  + +W+E    PM RL+R RF+RAPL EFVF D+RE + RN+PL +P  Y++N+ RS  YI  +Q R++ LA +IHSP HCSP GLSY+DI+LFPRLR +TI+KG+  P  IR+Y+++ +A +EIPLYDYCAM
Sbjct:   57 NIKYNLVFLANDDVKTPTDLVGRKITPIFQPDGANGPAYPESLDICQKIDNDSRFGTPALLNPSPPREGIVKWIEDTFEPMGRLSRPRFARAPLAEFVFRDSRETFARNYPLSDPDGYDENFRRSSAYIKKVQDRLERLAQLIHSPQHCSPHGLSYEDIILFPRLRTLTIVKGIHFPKRIREYIDFQAAVAEIPLYDYCAM 257          
BLAST of Ggra10794.t1 vs. uniprot
Match: A0A5J4YKV5 (Glutaredoxin 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YKV5_PORPP)

HSP 1 Score: 181 bits (459), Expect = 1.860e-51
Identity = 87/197 (44.16%), Postives = 128/197 (64.97%), Query Frame = 0
Query:  179 NVKHNLVWLANDDVATPTALVGRKIVPIFQ---PLGAGADALAESLDICAAVDADARFGQPGLLRPLSARADVAQWMEQLAMPMRRLTRVRFSRAPLPEFVFADAREAYVRNHPLKEPAEYEQNWARSDEYIAPIQARIQELADMIHSPYHCSPGGLSYDDIVLFPRLRAMTIIKGLTLPSAIRDYLEYHSAASEIP 372
            N+KH LV+LANDDVATPTALVG+K+VPI +   P   G + + ESLDI   +D D  FG   L++P + R D+  W+++     RRL   R+ R PLPEF FA+AR AY+RNH + EP +Y+ N+A S E +  + A + +L  ++    HCS GG+S DD+VLF RLR++ ++KG   P  ++ Y+++    ++IP
Sbjct:   44 NIKHELVFLANDDVATPTALVGKKVVPILEIGRPGQPGHELMNESLDIIKRIDEDPAFGPTNLIKPATGRQDIDAWIKESKELNRRLISPRYVRVPLPEFFFAEARAAYIRNHAIPEPGDYDTNFAMSAELLPQMNALMAKLDALVFCEQHCSEGGVSMDDLVLFSRLRSLELLKGAVWPPKVKAYMDHFHQLTDIP 240          
BLAST of Ggra10794.t1 vs. uniprot
Match: A0A6V1VKR3 (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VKR3_HETAK)

HSP 1 Score: 181 bits (460), Expect = 8.420e-51
Identity = 89/199 (44.72%), Postives = 131/199 (65.83%), Query Frame = 0
Query:  179 NVKHNLVWLANDDVATPTALVGRKIVPIFQPLGA--GADALAESLDICAAVDADARFGQPGLLRPLSARADVAQWMEQLAMPMRRLTRVRFSRAPL-PEFVFADAREAYVRNHPLKEPAEYEQNWARSDEYIAPIQARIQELADMIHSPYHCSPGGLSYDDIVLFPRLRAMTIIKGLTLPSAIRDYLEYHSAASEIPLY 374
            N+KH LVW+ANDD  TP +LVG+K+ PIF+      G + +AESLDI A +D+D ++G P LLRP S R D   W+    +   RL   R++R+PL PEF F +ARE YV+ HPL  P++Y+  +A S +++  +  ++ EL  MI S  HC+ GGLS DD+ LF RLR +T+++GL+ P  ++ Y+E  S  +++PLY
Sbjct:  110 NIKHELVWMANDDFDTPISLVGKKMAPIFEYNSEERGHEVMAESLDIIARLDSDPKWGPP-LLRPASDRTDFRNWINDNKVLYNRLVNPRYARSPLIPEFTFQEAREVYVKRHPLPAPSDYDVLFAMSPQFVEEMNEKLLELEPMIFSAEHCTAGGLSVDDVELFSRLRGLTVVRGLSFPPKVKAYIETMSQKTKVPLY 307          
BLAST of Ggra10794.t1 vs. uniprot
Match: A0A1Z5K1V3 (Glutaredoxin 2 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K1V3_FISSO)

HSP 1 Score: 173 bits (439), Expect = 6.070e-48
Identity = 100/218 (45.87%), Postives = 137/218 (62.84%), Query Frame = 0
Query:  179 NVKHNLVWLANDDVATPTALVGRKIVPIFQPLGAGADALAESLDICAAVDADARFGQPGLLRPLSARADVAQWMEQLAMPMRRLTRVRF-SRAPLPEFVFADAREAYVRNHPLK--EPAEYEQNWAR--------------SDEYIAPIQARIQELADMIHSPYHCSPGGLSYDDIVLFPRLRAMTIIKGLTLPSAIRDYLEYHSAASEIPLYDYCAM 379
            N+KHN+ ++ANDDV TPTALVG+KI PIF+   A    +AESLDI + VD+D RFG  G++ P + RAD+  W + +   +R L R R+ +   LPEF   D R+A++ NHPL   E AE+++  A               +DE I  +  ++ EL D+I S YHCSPGGLSYDDI LF RLR++TIIK +  PS +R Y++  S   +IPLYD  A+
Sbjct:   76 NIKHNIRFMANDDVPTPTALVGKKIAPIFEWPSADI-CMAESLDIISLVDSDERFGPTGVILPATDRADIKAWQKSVQGLLRILQRPRYVATGLLPEFQQLDGRQAFIMNHPLPPYEKAEWKEMGAEERLSIYAETMAKDPADE-IEELNRKLVELDDIIFSQYHCSPGGLSYDDIDLFARLRSITIIKDVIWPSKLRAYMDVMSELGDIPLYDEMAL 291          
BLAST of Ggra10794.t1 vs. uniprot
Match: A0A7S2D1F2 (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D1F2_9STRA)

HSP 1 Score: 169 bits (429), Expect = 3.640e-47
Identity = 85/213 (39.91%), Postives = 128/213 (60.09%), Query Frame = 0
Query:  179 NVKHNLVWLANDDVATPTALVGRKIVPIFQPLGAGADALAESLDICAAVDADARFGQPGLLRPLSARADVAQWMEQLAMPMRRLTRVRFSRAPLPEFVFADAREAYVRNHPLK--EPAEYEQN-------WA--------RSDEYIAPIQARIQELADMIHSPYHCSPGGLSYDDIVLFPRLRAMTIIKGLTLPSAIRDYLEYHSAASEIPLY 374
            NVKH +V++ NDDVATPTAL+G+KI PI          + ESLDIC   D + RFG   +++P + R D   W + L   +R LTR R+ +  LPEF+  D ++A+V+NH L   E  E+++        WA        ++ E++  + A ++EL  MI+S   CS GG SYDDI L+ RLR+++++KG   P  ++DY++YH  A ++PLY
Sbjct:   17 NVKHEVVFMGNDDVATPTALIGKKIAPILVMPNDDMAPMPESLDICKFFDENERFGPTNVIKPATGRTDFKTWQKGLQTTLRMLTRPRYMQTALPEFMQQDGKDAFVKNHQLPPYEKKEWKEGDMTMDAKWALYTDALETKTGEHLPDLNAALKELEPMIYSKEFCSEGGFSYDDIDLWSRLRSISLVKGAEFPKGVKDYMDYHEKAGDVPLY 229          
BLAST of Ggra10794.t1 vs. uniprot
Match: B7G505 (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G505_PHATC)

HSP 1 Score: 171 bits (433), Expect = 6.820e-47
Identity = 97/224 (43.30%), Postives = 136/224 (60.71%), Query Frame = 0
Query:  179 NVKHNLVWLANDDVATPTALVGRKIVPIFQPLGAGAD-ALAESLDICAAVDADARFGQPGLLRPLSARADVAQWMEQLAMPMRRLTRVRF-SRAPLPEFVFADAREAYVRNHPLKEPAEYEQN-WARSD--------------------EYIAPIQARIQELADMIHSPYHCSPGGLSYDDIVLFPRLRAMTIIKGLTLPSAIRDYLEYHSAASEIPLYDYCAM 379
            NVKH + +LANDDV TPTALVG+KI P++  +   AD  +AESLDIC  VDAD RFG    +RP + R D+  W + +   +R L R R+ +   LPEF   DAR+A+V NH L     YE+N W  SD                    +++  +  ++ EL +++ S YHCSPGGLSYDD+ LF RLR++TI+KG+  P+ +R Y++Y +   ++PLYD  AM
Sbjct:   87 NVKHYVHFLANDDVPTPTALVGKKIAPVW--VWPEADIVMAESLDICRLVDADERFGPVQAIRPATERTDIRDWQKSVQSLLRTLQRPRYVATGLLPEFQQRDARDAFVANHQLPP---YEKNEWKGSDGPTLAEKWQLYRDARDADPTQHLQALNEKLVELDELLDSEYHCSPGGLSYDDVDLFARLRSVTIVKGVQWPTKLRAYMDYMAELGDVPLYDAMAM 305          
BLAST of Ggra10794.t1 vs. uniprot
Match: A0A0G4EFM6 (GST N-terminal domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EFM6_VITBC)

HSP 1 Score: 171 bits (433), Expect = 1.560e-46
Identity = 88/203 (43.35%), Postives = 131/203 (64.53%), Query Frame = 0
Query:  179 NVKHNLVWLANDDVATPTALVGRKIVPIFQPLGAGADA---LAESLDICAAVDADARFGQP-GLLRPLSARADVAQWMEQLAMPMRRLTRVRFS-RAPLPEFVFADAREAYVRNHPLKEPAEYEQNWARSDEYIAPIQARIQELADMIHSPY--HCSPGGLSYDDIVLFPRLRAMTIIKGLTLPSAIRDYLEYHSAASEIPLY 374
            N+KH+LV++ANDD+ TPT L+G+K+ PI +  G        + ESLDI   +D     G    LL+P S R+D+ +W++ +A P RRL+R RF+  A LPEF F  AR  Y+  HPL+ P+ YE+N+ RS E+IA +   +++L  MI +P   + S GG+SYDDI +FPRLR ++I+KGL  P  ++ Y+E  S  +++ LY
Sbjct:  130 NIKHDLVYMANDDIETPTHLIGKKMAPILEVRGRRPGEGLIMPESLDIVKYIDESEEIGAGLPLLKPFSGRSDLKEWLDSIAEPSRRLSRPRFAWSANLPEFAFDSARRTYIARHPLENPSSYEENYERSAEWIAALSEGLKKLDGMIANPQEGYISEGGISYDDIDMFPRLRNLSIVKGLEFPPNVKAYIEVLSKKTDVALY 332          
BLAST of Ggra10794.t1 vs. uniprot
Match: A0A7S0Q1W7 (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q1W7_9EUKA)

HSP 1 Score: 169 bits (427), Expect = 2.740e-46
Identity = 91/213 (42.72%), Postives = 127/213 (59.62%), Query Frame = 0
Query:  179 NVKHNLVWLANDDVATPTALVGRKIVPIFQPLGAGADALAESLDICAAVDADARFGQPGLLRPLSARADVAQWMEQLAMPMRRLTRVRFSRAPLPEFVFADAREAYVRNH-----PLKEPAEYEQNWARSDEYIAP-----------IQARIQELADMIHSPYHCSPGGLSYDDIVLFPRLRAMTIIKGLTLPSAIRDYLEYHSAASEIPLYD 375
            NVKHN+ +L+NDDV TPT LVG+KI PI+         + ES+DI   VDADA FG PGL++P S R D+  W + +   MR   R R+  +PLPEF+  DAR A+++NH      L +P+  E      D Y A            + A ++EL  +IHSP   + GG+SYDDI  + RLR++TI+KGL  P+ +R YL+Y +   ++PLYD
Sbjct:   67 NVKHNVHFLSNDDVETPTGLVGKKIAPIWVDREEAP--MPESMDIIEKVDADAAFGAPGLIKPASGRTDLKAWQKTVQRAMRLTQRPRYVLSPLPEFMQYDARRAFIKNHFVPIGELDKPSWKELTQEEHDNYYAEAISMTADLIPQLNAALKELEPLIHSPQCVTEGGVSYDDIDTWARLRSLTIVKGLDFPTKVRAYLDYFAELGDVPLYD 277          
BLAST of Ggra10794.t1 vs. uniprot
Match: A0A7S2V214 (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V214_9STRA)

HSP 1 Score: 169 bits (427), Expect = 4.830e-46
Identity = 90/214 (42.06%), Postives = 132/214 (61.68%), Query Frame = 0
Query:  179 NVKHNLVWLANDDVATPTALVGRKIVPIFQPLGAGADALAESLDICAAVDADARFGQPGLLRPLSARADVAQWMEQLAMP--MRRLTRVRFSRAPLPEFVFADAREAYVRNHPLK--EPAE--------------YEQNWARSDEYIAPIQARIQELADMIHSPYHCSPGGLSYDDIVLFPRLRAMTIIKGLTLPSAIRDYLEYHSAASEIPLY 374
            NVKH++V+LANDDVATPT LVG+K+ PIF  +      + ESLDI   VD D+RFG+ G L+P S R D+  W +QL        + R R+ +  LPEF   D R+A+V+NHP+   E AE              Y ++ A +DE +  +   ++EL DMI+   +C+ GG+  DD+ L+ RLR++T+IKG+ LPS ++ Y+EY+S   ++PLY
Sbjct:   85 NVKHDIVFLANDDVATPTGLVGKKVAPIFA-IPQDDLVMGESLDIIELVDKDSRFGETGYLKPFSDRTDLKAWQKQLKKSGISGHMQRPRYMQTALPEFATKDGRDAFVKNHPVPPYEKAEWKADDFSQELRWEKYAESLAMTDELLPKLNEMLKELDDMIYCEEYCTEGGMCMDDVDLWSRLRSITVIKGVELPSKLKAYMEYYSEKGDMPLY 297          
The following BLAST results are available for this feature:
BLAST of Ggra10794.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IFN81.530e-9668.16Glutaredoxin 2 n=1 Tax=Gracilariopsis chorda TaxID... [more]
A0A2V3IZ392.100e-8058.71Glutaredoxin 2 n=1 Tax=Gracilariopsis chorda TaxID... [more]
A0A5J4YKV51.860e-5144.16Glutaredoxin 2 n=1 Tax=Porphyridium purpureum TaxI... [more]
A0A6V1VKR38.420e-5144.72Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1Z5K1V36.070e-4845.87Glutaredoxin 2 n=2 Tax=Fistulifera solaris TaxID=1... [more]
A0A7S2D1F23.640e-4739.91Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
B7G5056.820e-4743.30Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A0G4EFM61.560e-4643.35GST N-terminal domain-containing protein n=1 Tax=V... [more]
A0A7S0Q1W72.740e-4642.72Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S2V2144.830e-4642.06Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 177..240
e-value: 4.8E-13
score: 51.0
NoneNo IPR availableGENE3D1.20.1050.10coord: 252..379
e-value: 1.2E-35
score: 124.2
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..40
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 104..125
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..103
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 126..379
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availableTMHMMTMhelixcoord: 104..125
NoneNo IPR availableTMHMMTMhelixcoord: 21..43
IPR007494Glutaredoxin 2, C-terminalPFAMPF04399Glutaredoxin2_Ccoord: 248..377
e-value: 7.3E-31
score: 106.7
IPR036282Glutathione S-transferase, C-terminal domain superfamilySUPERFAMILY47616GST C-terminal domain-likecoord: 245..378

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000225_piloncontigtig00000225_pilon:99161..100993 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10794.t1Ggra10794.t1Gracilaria gracilis GNS1m malemRNAtig00000225_pilon 99161..100993 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10794.t1 ID=Ggra10794.t1|Name=Ggra10794.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=380bp
MHGDGIRKRRKWEKVWLVFKVALGLFVIGVEIATLVFSWATQNAAQNWSS
FFTWLDASVALSSSVQECESRKEFFCSAARSVYVVTGLMGTATAFHPKQA
RWKWLLVSMVLISIATMVFVVLYFVKSYRRWRRFDQLGRDRWAYYASRAS
LLRPLSRQDMRRLLEWYNVRRGERDIELNVKHNLVWLANDDVATPTALVG
RKIVPIFQPLGAGADALAESLDICAAVDADARFGQPGLLRPLSARADVAQ
WMEQLAMPMRRLTRVRFSRAPLPEFVFADAREAYVRNHPLKEPAEYEQNW
ARSDEYIAPIQARIQELADMIHSPYHCSPGGLSYDDIVLFPRLRAMTIIK
GLTLPSAIRDYLEYHSAASEIPLYDYCAM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007494Glutaredoxin2_C
IPR036282Glutathione-S-Trfase_C_sf