Ggra10021.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10021.t1
Unique NameGgra10021.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length257
Homology
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BLAST of Ggra10021.t1 vs. uniprot
Match: A0A2V3IK99 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK99_9FLOR)

HSP 1 Score: 268 bits (685), Expect = 1.340e-87
Identity = 130/220 (59.09%), Postives = 164/220 (74.55%), Query Frame = 0 
Query:   36 MTALPDDTALDMISFALSGPGILATSAFLVSGTAILLSFADFGPKKTSTSAIYILQISLPSPKSVELPNGKVARLREGETVLQFNSFEECTTVTKKLEEPGVTYSVLRTSSTAVKEVYKYPKPVNALGARWPQNLVEFRDESDPQARWAEYEQIDAKGDLDLEWSSLMKKMAPIQFISKKDCRLCAGTGRVRCFRCGGVGGNSNFECDCVQGKRACEWCA 255
            M+ALPDDTALDM+SFALSGPG+ AT+AF +SG A+LLSFA+ G +K S S  + L+++LPS   VE P+G V+ LREGE VL+F S E CTTV K+LE P V YSVLRT++T++KEV++YP+ + A G++WPQ+LVE R E+D QARWAEYEQIDA  D+D EWSSLMK M+PIQF  + +CRLCAGT                   DC+QGKRACEWC+
Sbjct:    1 MSALPDDTALDMLSFALSGPGVFATAAFALSGIALLLSFAEIGQRKNSPSTYFFLRVTLPSSMQVEGPDGTVSNLREGENVLRFRSLEACTTVAKRLEGPDVEYSVLRTTATSIKEVFQYPQKLRAAGSKWPQDLVELRTETDLQARWAEYEQIDAYDDVDKEWSSLMKNMSPIQFTGRPECRLCAGTXXXXXXXXXXXXXXXXXXXDCMQGKRACEWCS 220
The following BLAST results are available for this feature:
BLAST of Ggra10021.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IK991.340e-8759.09Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..55
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 56..75
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 76..256

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000222_piloncontigtig00000222_pilon:80269..81039 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10021.t1Ggra10021.t1Gracilaria gracilis GNS1m malemRNAtig00000222_pilon 80269..81039 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10021.t1 ID=Ggra10021.t1|Name=Ggra10021.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=257bp
MVTDAPIAFLGSFPVRLGSTTRPSKCLRRARSKICMTALPDDTALDMISF
ALSGPGILATSAFLVSGTAILLSFADFGPKKTSTSAIYILQISLPSPKSV
ELPNGKVARLREGETVLQFNSFEECTTVTKKLEEPGVTYSVLRTSSTAVK
EVYKYPKPVNALGARWPQNLVEFRDESDPQARWAEYEQIDAKGDLDLEWS
SLMKKMAPIQFISKKDCRLCAGTGRVRCFRCGGVGGNSNFECDCVQGKRA
CEWCAQ*
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