Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra9991.t1.stop1 | Ggra9991.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000213_pilon 123960..123962 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra9991.t1.start1 | Ggra9991.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000213_pilon 125988..125990 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra9991.t1 ID=Ggra9991.t1|Name=Ggra9991.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=677bp
MLRSPSFDFEAQFHHAQEGYSDSKLHIDLNSPMDRRLQRKIVVCQKRFHR
YRSRTPPPHARQESNPSIDQAHITRKPLIKNIPRALKTFISRSPISQPQN
VPLRLNRLHGADHSRMSVLSPSLRKEFRKISYQNPQSSHIVVNVDSSASP
QSPRKRNSRRQSIPHPQPQLHLQTQTQPQPQLLLQTRAQHKPTLKPVRLA
GDDHNDIVPTQIVPSRQSPPSSLNENHEHIAMELKSTASVSSRSVQEQNQ
TVHLPEEQAVHEQQSDAPSKPTELPLNISTLINKYDKNNSTPDKSNNNIE
RLSLIPEAQHKVATMRALFEADQAERQRLSSLKSPPRSNTTPFLKPKPYN
AISQPSVERTSFSPLSTTSPSISTLRNNPEQIPKRHGTRFVKLVDSPKSP
IDHKGIGTEGSVISSVTKTPDDDTILGDTDLEEERIALDPISRVQEADHR
DIPERMNLRDLFESLELSPDEKETTAVKSPKSNKSRERSSTVAKLIARYG
GTDQSTEKENGRRLETENDAPRKEKRTVEEKVNRSLVMDEGDEIQKVYKT
EAKDKKKLGRSVDQIPERQGGVEAIPWEARIKSFNAEVEEAASMAYIRKV
MSHDGENDRFKSFSVYSGTDQDSQLRTRSEASGRRWRRRSARAQNKSWLS
RKANEQVHKVKKRVGTMRNIISADDY* back to topspliced messenger RNA >Ggra9991.t1 ID=Ggra9991.t1|Name=Ggra9991.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2031bp|location=Sequence derived from alignment at tig00000213_pilon:123960..125990- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGCTTCGTTCGCCGTCGTTTGACTTCGAGGCGCAGTTTCATCACGCTCA
GGAGGGCTATTCCGATTCCAAGCTGCATATCGACCTCAACTCCCCGATGG
ATCGTCGTCTGCAGCGCAAGATCGTCGTTTGTCAGAAGCGCTTCCATCGC
TACAGGTCCAGGACGCCGCCGCCACACGCGCGTCAGGAGTCGAACCCGTC
TATTGATCAAGCGCATATCACGCGCAAGCCTTTGATCAAGAACATTCCTC
GCGCCTTGAAGACGTTCATTTCGCGCTCTCCCATTTCGCAGCCGCAGAAT
GTCCCACTCAGGCTTAACCGTTTGCACGGTGCCGACCACAGCCGTATGTC
TGTATTGTCACCCTCGCTTCGTAAGGAGTTTCGAAAGATAAGCTATCAGA
ATCCCCAGTCTTCTCACATTGTTGTCAACGTTGACTCATCTGCGTCGCCA
CAGTCTCCGAGGAAGAGGAATTCGAGGCGCCAAAGTATCCCACACCCACA
GCCTCAATTGCACCTCCAAACTCAAACTCAACCTCAACCGCAGCTGCTTC
TCCAGACCCGAGCGCAGCACAAGCCCACTTTGAAGCCTGTTCGCCTAGCT
GGTGATGATCACAATGACATTGTTCCTACACAAATTGTACCTTCGAGGCA
ATCCCCCCCATCGAGCTTGAACGAAAATCACGAGCACATCGCAATGGAAC
TCAAGAGCACGGCTTCCGTTTCATCCCGCAGCGTCCAAGAACAAAATCAA
ACAGTTCATCTTCCGGAAGAACAAGCAGTCCATGAGCAGCAATCCGACGC
ACCATCTAAACCAACTGAGCTTCCCCTCAACATATCGACATTGATTAATA
AGTATGACAAGAATAACTCTACGCCAGACAAATCGAACAACAACATCGAG
CGGCTCTCACTCATCCCCGAGGCTCAACACAAAGTCGCTACCATGCGAGC
TCTATTTGAAGCCGATCAGGCAGAACGGCAGCGTCTGTCATCGTTGAAGA
GCCCCCCGCGAAGCAATACTACGCCGTTCTTGAAACCCAAACCGTACAAC
GCTATATCTCAACCAAGTGTGGAAAGAACCTCTTTCTCACCGTTAAGTAC
AACCTCCCCATCCATTAGCACGTTACGAAACAACCCTGAACAGATTCCGA
AACGTCATGGAACCCGTTTTGTGAAACTCGTTGACAGTCCGAAGTCTCCT
ATTGATCATAAGGGCATCGGTACAGAAGGTTCTGTGATTTCTTCTGTGAC
GAAGACTCCAGACGATGATACAATTTTGGGCGACACAGATTTGGAGGAAG
AACGCATAGCTTTAGACCCTATATCTCGTGTACAGGAAGCTGATCACCGG
GATATCCCGGAAAGGATGAACTTGAGGGATCTCTTTGAGTCGCTCGAACT
GTCTCCGGATGAAAAGGAGACTACGGCTGTCAAGAGCCCCAAATCTAACA
AAAGCAGAGAACGTTCTTCAACCGTTGCAAAGCTCATCGCCAGATACGGG
GGAACTGATCAATCGACCGAGAAGGAGAATGGTCGTAGGTTGGAAACAGA
AAACGACGCTCCACGAAAGGAAAAGCGTACAGTTGAGGAAAAGGTGAACA
GATCGCTTGTTATGGACGAAGGGGATGAGATCCAGAAGGTGTACAAGACT
GAGGCGAAGGACAAAAAGAAACTTGGACGATCAGTAGACCAGATCCCGGA
ACGTCAGGGAGGGGTTGAAGCCATTCCCTGGGAAGCCCGTATCAAATCCT
TCAACGCAGAAGTAGAGGAAGCCGCGAGCATGGCATATATCAGAAAAGTT
ATGTCTCATGACGGAGAGAACGATCGCTTCAAGTCTTTCAGTGTTTATAG
TGGCACGGACCAAGACTCGCAGTTGAGGACAAGAAGTGAGGCGAGTGGCC
GTAGGTGGCGAAGGCGTAGTGCTCGAGCACAAAACAAGTCTTGGTTATCC
AGAAAAGCTAATGAACAAGTGCACAAAGTGAAGAAACGTGTTGGTACGAT
GAGAAATATTATATCTGCTGACGATTATTAG back to topprotein sequence of Ggra9991.t1 >Ggra9991.t1 ID=Ggra9991.t1|Name=Ggra9991.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=677bp
MLRSPSFDFEAQFHHAQEGYSDSKLHIDLNSPMDRRLQRKIVVCQKRFHR
YRSRTPPPHARQESNPSIDQAHITRKPLIKNIPRALKTFISRSPISQPQN
VPLRLNRLHGADHSRMSVLSPSLRKEFRKISYQNPQSSHIVVNVDSSASP
QSPRKRNSRRQSIPHPQPQLHLQTQTQPQPQLLLQTRAQHKPTLKPVRLA
GDDHNDIVPTQIVPSRQSPPSSLNENHEHIAMELKSTASVSSRSVQEQNQ
TVHLPEEQAVHEQQSDAPSKPTELPLNISTLINKYDKNNSTPDKSNNNIE
RLSLIPEAQHKVATMRALFEADQAERQRLSSLKSPPRSNTTPFLKPKPYN
AISQPSVERTSFSPLSTTSPSISTLRNNPEQIPKRHGTRFVKLVDSPKSP
IDHKGIGTEGSVISSVTKTPDDDTILGDTDLEEERIALDPISRVQEADHR
DIPERMNLRDLFESLELSPDEKETTAVKSPKSNKSRERSSTVAKLIARYG
GTDQSTEKENGRRLETENDAPRKEKRTVEEKVNRSLVMDEGDEIQKVYKT
EAKDKKKLGRSVDQIPERQGGVEAIPWEARIKSFNAEVEEAASMAYIRKV
MSHDGENDRFKSFSVYSGTDQDSQLRTRSEASGRRWRRRSARAQNKSWLS
RKANEQVHKVKKRVGTMRNIISADDY* back to topmRNA from alignment at tig00000213_pilon:123960..125990- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra9991.t1 ID=Ggra9991.t1|Name=Ggra9991.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2031bp|location=Sequence derived from alignment at tig00000213_pilon:123960..125990- (Gracilaria gracilis GNS1m male)
ATGCTTCGTTCGCCGTCGTTTGACTTCGAGGCGCAGTTTCATCACGCTCA
GGAGGGCTATTCCGATTCCAAGCTGCATATCGACCTCAACTCCCCGATGG
ATCGTCGTCTGCAGCGCAAGATCGTCGTTTGTCAGAAGCGCTTCCATCGC
TACAGGTCCAGGACGCCGCCGCCACACGCGCGTCAGGAGTCGAACCCGTC
TATTGATCAAGCGCATATCACGCGCAAGCCTTTGATCAAGAACATTCCTC
GCGCCTTGAAGACGTTCATTTCGCGCTCTCCCATTTCGCAGCCGCAGAAT
GTCCCACTCAGGCTTAACCGTTTGCACGGTGCCGACCACAGCCGTATGTC
TGTATTGTCACCCTCGCTTCGTAAGGAGTTTCGAAAGATAAGCTATCAGA
ATCCCCAGTCTTCTCACATTGTTGTCAACGTTGACTCATCTGCGTCGCCA
CAGTCTCCGAGGAAGAGGAATTCGAGGCGCCAAAGTATCCCACACCCACA
GCCTCAATTGCACCTCCAAACTCAAACTCAACCTCAACCGCAGCTGCTTC
TCCAGACCCGAGCGCAGCACAAGCCCACTTTGAAGCCTGTTCGCCTAGCT
GGTGATGATCACAATGACATTGTTCCTACACAAATTGTACCTTCGAGGCA
ATCCCCCCCATCGAGCTTGAACGAAAATCACGAGCACATCGCAATGGAAC
TCAAGAGCACGGCTTCCGTTTCATCCCGCAGCGTCCAAGAACAAAATCAA
ACAGTTCATCTTCCGGAAGAACAAGCAGTCCATGAGCAGCAATCCGACGC
ACCATCTAAACCAACTGAGCTTCCCCTCAACATATCGACATTGATTAATA
AGTATGACAAGAATAACTCTACGCCAGACAAATCGAACAACAACATCGAG
CGGCTCTCACTCATCCCCGAGGCTCAACACAAAGTCGCTACCATGCGAGC
TCTATTTGAAGCCGATCAGGCAGAACGGCAGCGTCTGTCATCGTTGAAGA
GCCCCCCGCGAAGCAATACTACGCCGTTCTTGAAACCCAAACCGTACAAC
GCTATATCTCAACCAAGTGTGGAAAGAACCTCTTTCTCACCGTTAAGTAC
AACCTCCCCATCCATTAGCACGTTACGAAACAACCCTGAACAGATTCCGA
AACGTCATGGAACCCGTTTTGTGAAACTCGTTGACAGTCCGAAGTCTCCT
ATTGATCATAAGGGCATCGGTACAGAAGGTTCTGTGATTTCTTCTGTGAC
GAAGACTCCAGACGATGATACAATTTTGGGCGACACAGATTTGGAGGAAG
AACGCATAGCTTTAGACCCTATATCTCGTGTACAGGAAGCTGATCACCGG
GATATCCCGGAAAGGATGAACTTGAGGGATCTCTTTGAGTCGCTCGAACT
GTCTCCGGATGAAAAGGAGACTACGGCTGTCAAGAGCCCCAAATCTAACA
AAAGCAGAGAACGTTCTTCAACCGTTGCAAAGCTCATCGCCAGATACGGG
GGAACTGATCAATCGACCGAGAAGGAGAATGGTCGTAGGTTGGAAACAGA
AAACGACGCTCCACGAAAGGAAAAGCGTACAGTTGAGGAAAAGGTGAACA
GATCGCTTGTTATGGACGAAGGGGATGAGATCCAGAAGGTGTACAAGACT
GAGGCGAAGGACAAAAAGAAACTTGGACGATCAGTAGACCAGATCCCGGA
ACGTCAGGGAGGGGTTGAAGCCATTCCCTGGGAAGCCCGTATCAAATCCT
TCAACGCAGAAGTAGAGGAAGCCGCGAGCATGGCATATATCAGAAAAGTT
ATGTCTCATGACGGAGAGAACGATCGCTTCAAGTCTTTCAGTGTTTATAG
TGGCACGGACCAAGACTCGCAGTTGAGGACAAGAAGTGAGGCGAGTGGCC
GTAGGTGGCGAAGGCGTAGTGCTCGAGCACAAAACAAGTCTTGGTTATCC
AGAAAAGCTAATGAACAAGTGCACAAAGTGAAGAAACGTGTTGGTACGAT
GAGAAATATTATATCTGCTGACGATTATTAG back to topCoding sequence (CDS) from alignment at tig00000213_pilon:123960..125990- >Ggra9991.t1 ID=Ggra9991.t1|Name=Ggra9991.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2031bp|location=Sequence derived from alignment at tig00000213_pilon:123960..125990- (Gracilaria gracilis GNS1m male)
ATGCTTCGTTCGCCGTCGTTTGACTTCGAGGCGCAGTTTCATCACGCTCA
GGAGGGCTATTCCGATTCCAAGCTGCATATCGACCTCAACTCCCCGATGG
ATCGTCGTCTGCAGCGCAAGATCGTCGTTTGTCAGAAGCGCTTCCATCGC
TACAGGTCCAGGACGCCGCCGCCACACGCGCGTCAGGAGTCGAACCCGTC
TATTGATCAAGCGCATATCACGCGCAAGCCTTTGATCAAGAACATTCCTC
GCGCCTTGAAGACGTTCATTTCGCGCTCTCCCATTTCGCAGCCGCAGAAT
GTCCCACTCAGGCTTAACCGTTTGCACGGTGCCGACCACAGCCGTATGTC
TGTATTGTCACCCTCGCTTCGTAAGGAGTTTCGAAAGATAAGCTATCAGA
ATCCCCAGTCTTCTCACATTGTTGTCAACGTTGACTCATCTGCGTCGCCA
CAGTCTCCGAGGAAGAGGAATTCGAGGCGCCAAAGTATCCCACACCCACA
GCCTCAATTGCACCTCCAAACTCAAACTCAACCTCAACCGCAGCTGCTTC
TCCAGACCCGAGCGCAGCACAAGCCCACTTTGAAGCCTGTTCGCCTAGCT
GGTGATGATCACAATGACATTGTTCCTACACAAATTGTACCTTCGAGGCA
ATCCCCCCCATCGAGCTTGAACGAAAATCACGAGCACATCGCAATGGAAC
TCAAGAGCACGGCTTCCGTTTCATCCCGCAGCGTCCAAGAACAAAATCAA
ACAGTTCATCTTCCGGAAGAACAAGCAGTCCATGAGCAGCAATCCGACGC
ACCATCTAAACCAACTGAGCTTCCCCTCAACATATCGACATTGATTAATA
AGTATGACAAGAATAACTCTACGCCAGACAAATCGAACAACAACATCGAG
CGGCTCTCACTCATCCCCGAGGCTCAACACAAAGTCGCTACCATGCGAGC
TCTATTTGAAGCCGATCAGGCAGAACGGCAGCGTCTGTCATCGTTGAAGA
GCCCCCCGCGAAGCAATACTACGCCGTTCTTGAAACCCAAACCGTACAAC
GCTATATCTCAACCAAGTGTGGAAAGAACCTCTTTCTCACCGTTAAGTAC
AACCTCCCCATCCATTAGCACGTTACGAAACAACCCTGAACAGATTCCGA
AACGTCATGGAACCCGTTTTGTGAAACTCGTTGACAGTCCGAAGTCTCCT
ATTGATCATAAGGGCATCGGTACAGAAGGTTCTGTGATTTCTTCTGTGAC
GAAGACTCCAGACGATGATACAATTTTGGGCGACACAGATTTGGAGGAAG
AACGCATAGCTTTAGACCCTATATCTCGTGTACAGGAAGCTGATCACCGG
GATATCCCGGAAAGGATGAACTTGAGGGATCTCTTTGAGTCGCTCGAACT
GTCTCCGGATGAAAAGGAGACTACGGCTGTCAAGAGCCCCAAATCTAACA
AAAGCAGAGAACGTTCTTCAACCGTTGCAAAGCTCATCGCCAGATACGGG
GGAACTGATCAATCGACCGAGAAGGAGAATGGTCGTAGGTTGGAAACAGA
AAACGACGCTCCACGAAAGGAAAAGCGTACAGTTGAGGAAAAGGTGAACA
GATCGCTTGTTATGGACGAAGGGGATGAGATCCAGAAGGTGTACAAGACT
GAGGCGAAGGACAAAAAGAAACTTGGACGATCAGTAGACCAGATCCCGGA
ACGTCAGGGAGGGGTTGAAGCCATTCCCTGGGAAGCCCGTATCAAATCCT
TCAACGCAGAAGTAGAGGAAGCCGCGAGCATGGCATATATCAGAAAAGTT
ATGTCTCATGACGGAGAGAACGATCGCTTCAAGTCTTTCAGTGTTTATAG
TGGCACGGACCAAGACTCGCAGTTGAGGACAAGAAGTGAGGCGAGTGGCC
GTAGGTGGCGAAGGCGTAGTGCTCGAGCACAAAACAAGTCTTGGTTATCC
AGAAAAGCTAATGAACAAGTGCACAAAGTGAAGAAACGTGTTGGTACGAT
GAGAAATATTATATCTGCTGACGATTATTAG back to top
|