Ggra7010.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra7010.t1
Unique NameGgra7010.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length395
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000211_piloncontigtig00000211_pilon:220213..221397 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7010Ggra7010Gracilaria gracilis GNS1m malegenetig00000211_pilon 220213..221397 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7010.t1.stop1Ggra7010.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000211_pilon 220213..220215 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7010.t1.CDS1Ggra7010.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000211_pilon 220213..221397 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7010.t1.exon1Ggra7010.t1.exon1Gracilaria gracilis GNS1m maleexontig00000211_pilon 220213..221397 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7010.t1.start1Ggra7010.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000211_pilon 221395..221397 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7010.t1Ggra7010.t1Gracilaria gracilis GNS1m malepolypeptidetig00000211_pilon 220213..221397 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra7010.t1 ID=Ggra7010.t1|Name=Ggra7010.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=395bp
MNFSEKLREKFTSLNMRAQGRQFREKLSSIRAKVTGGRVSRLARKIPCFG
KVFPKCEGGDKEDTLSFSKANNKEETTMQKRNNGESNESIEIHDDILQTP
KTGALEKKRVRFAGVDGQACPSFSTECKDYEENESCNSRRKVLLSGTRAN
VGDRAPKVEVCASSDNRNQFDERSYEMPSSERDQSTTPFSVRQSNKCEIL
PSVSPDKLGIVPSPSPPIPEGESQELRRPSSIGVVNETKPRLKRAEKRIA
FLKDYFSQNLPSLQNQSKCNGVYGSESSMTEFQSTVMDVEEVVSPLPGAY
KASCSSSDSVKAKNELVISTERTRFDDIHSEANSRNLSTSSNEYNGSGEE
ITARKCVGIMFRTFDILKDYLGSSSPGKLSSDWFHLIEVPDEEE*
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spliced messenger RNA

>Ggra7010.t1 ID=Ggra7010.t1|Name=Ggra7010.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1185bp|location=Sequence derived from alignment at tig00000211_pilon:220213..221397- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAACTTTAGTGAGAAACTGCGGGAGAAGTTCACATCTTTGAACATGAG
AGCCCAAGGAAGACAGTTTCGCGAAAAGCTTTCATCGATTCGCGCAAAGG
TGACAGGAGGACGAGTCTCTCGTCTTGCCCGAAAGATACCTTGTTTCGGT
AAGGTATTTCCGAAATGTGAGGGAGGAGACAAAGAAGATACCCTCTCTTT
TTCTAAGGCGAACAATAAGGAAGAGACCACAATGCAGAAGCGAAACAATG
GAGAAAGCAATGAATCCATTGAAATCCATGATGACATCCTTCAAACACCA
AAGACTGGGGCTCTCGAGAAGAAACGAGTCCGGTTTGCGGGAGTGGATGG
ACAGGCATGCCCAAGCTTCAGCACGGAGTGCAAGGACTATGAGGAAAACG
AGAGTTGTAATTCTCGTCGTAAGGTTCTGTTGAGCGGCACCAGAGCCAAT
GTTGGGGACAGAGCCCCCAAAGTTGAAGTTTGCGCTTCTTCTGACAACCG
CAACCAGTTTGATGAAAGGTCTTACGAAATGCCATCATCAGAGAGAGACC
AGAGTACAACCCCATTCTCAGTACGTCAGTCAAACAAGTGTGAAATACTT
CCATCAGTTTCACCTGACAAGCTGGGGATTGTACCATCCCCCAGCCCTCC
GATTCCGGAAGGCGAATCGCAAGAATTACGACGACCGAGCTCAATTGGCG
TCGTGAATGAAACGAAACCCAGGTTGAAACGTGCCGAAAAAAGAATCGCG
TTCTTGAAAGATTATTTCTCCCAGAACCTCCCTTCATTGCAGAATCAATC
CAAATGCAATGGGGTTTACGGGAGCGAATCATCGATGACAGAATTTCAAA
GTACTGTCATGGATGTAGAAGAGGTGGTTAGCCCCCTTCCCGGGGCATAC
AAGGCTTCATGTTCCTCATCAGACTCTGTCAAGGCGAAGAACGAACTAGT
GATCTCGACTGAGAGGACGAGATTCGATGACATTCACTCGGAAGCAAACT
CGAGAAATCTTTCGACGTCATCGAATGAGTACAATGGAAGTGGTGAGGAA
ATAACCGCTAGAAAATGTGTCGGTATTATGTTCCGAACATTTGATATACT
CAAAGATTATCTGGGATCATCATCACCAGGGAAATTATCCTCTGATTGGT
TTCACTTGATCGAGGTACCTGATGAAGAGGAGTAG
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protein sequence of Ggra7010.t1

>Ggra7010.t1 ID=Ggra7010.t1|Name=Ggra7010.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=395bp
MNFSEKLREKFTSLNMRAQGRQFREKLSSIRAKVTGGRVSRLARKIPCFG
KVFPKCEGGDKEDTLSFSKANNKEETTMQKRNNGESNESIEIHDDILQTP
KTGALEKKRVRFAGVDGQACPSFSTECKDYEENESCNSRRKVLLSGTRAN
VGDRAPKVEVCASSDNRNQFDERSYEMPSSERDQSTTPFSVRQSNKCEIL
PSVSPDKLGIVPSPSPPIPEGESQELRRPSSIGVVNETKPRLKRAEKRIA
FLKDYFSQNLPSLQNQSKCNGVYGSESSMTEFQSTVMDVEEVVSPLPGAY
KASCSSSDSVKAKNELVISTERTRFDDIHSEANSRNLSTSSNEYNGSGEE
ITARKCVGIMFRTFDILKDYLGSSSPGKLSSDWFHLIEVPDEEE*
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mRNA from alignment at tig00000211_pilon:220213..221397-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra7010.t1 ID=Ggra7010.t1|Name=Ggra7010.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1185bp|location=Sequence derived from alignment at tig00000211_pilon:220213..221397- (Gracilaria gracilis GNS1m male)
ATGAACTTTAGTGAGAAACTGCGGGAGAAGTTCACATCTTTGAACATGAG
AGCCCAAGGAAGACAGTTTCGCGAAAAGCTTTCATCGATTCGCGCAAAGG
TGACAGGAGGACGAGTCTCTCGTCTTGCCCGAAAGATACCTTGTTTCGGT
AAGGTATTTCCGAAATGTGAGGGAGGAGACAAAGAAGATACCCTCTCTTT
TTCTAAGGCGAACAATAAGGAAGAGACCACAATGCAGAAGCGAAACAATG
GAGAAAGCAATGAATCCATTGAAATCCATGATGACATCCTTCAAACACCA
AAGACTGGGGCTCTCGAGAAGAAACGAGTCCGGTTTGCGGGAGTGGATGG
ACAGGCATGCCCAAGCTTCAGCACGGAGTGCAAGGACTATGAGGAAAACG
AGAGTTGTAATTCTCGTCGTAAGGTTCTGTTGAGCGGCACCAGAGCCAAT
GTTGGGGACAGAGCCCCCAAAGTTGAAGTTTGCGCTTCTTCTGACAACCG
CAACCAGTTTGATGAAAGGTCTTACGAAATGCCATCATCAGAGAGAGACC
AGAGTACAACCCCATTCTCAGTACGTCAGTCAAACAAGTGTGAAATACTT
CCATCAGTTTCACCTGACAAGCTGGGGATTGTACCATCCCCCAGCCCTCC
GATTCCGGAAGGCGAATCGCAAGAATTACGACGACCGAGCTCAATTGGCG
TCGTGAATGAAACGAAACCCAGGTTGAAACGTGCCGAAAAAAGAATCGCG
TTCTTGAAAGATTATTTCTCCCAGAACCTCCCTTCATTGCAGAATCAATC
CAAATGCAATGGGGTTTACGGGAGCGAATCATCGATGACAGAATTTCAAA
GTACTGTCATGGATGTAGAAGAGGTGGTTAGCCCCCTTCCCGGGGCATAC
AAGGCTTCATGTTCCTCATCAGACTCTGTCAAGGCGAAGAACGAACTAGT
GATCTCGACTGAGAGGACGAGATTCGATGACATTCACTCGGAAGCAAACT
CGAGAAATCTTTCGACGTCATCGAATGAGTACAATGGAAGTGGTGAGGAA
ATAACCGCTAGAAAATGTGTCGGTATTATGTTCCGAACATTTGATATACT
CAAAGATTATCTGGGATCATCATCACCAGGGAAATTATCCTCTGATTGGT
TTCACTTGATCGAGGTACCTGATGAAGAGGAGTAG
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Coding sequence (CDS) from alignment at tig00000211_pilon:220213..221397-

>Ggra7010.t1 ID=Ggra7010.t1|Name=Ggra7010.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1185bp|location=Sequence derived from alignment at tig00000211_pilon:220213..221397- (Gracilaria gracilis GNS1m male)
ATGAACTTTAGTGAGAAACTGCGGGAGAAGTTCACATCTTTGAACATGAG
AGCCCAAGGAAGACAGTTTCGCGAAAAGCTTTCATCGATTCGCGCAAAGG
TGACAGGAGGACGAGTCTCTCGTCTTGCCCGAAAGATACCTTGTTTCGGT
AAGGTATTTCCGAAATGTGAGGGAGGAGACAAAGAAGATACCCTCTCTTT
TTCTAAGGCGAACAATAAGGAAGAGACCACAATGCAGAAGCGAAACAATG
GAGAAAGCAATGAATCCATTGAAATCCATGATGACATCCTTCAAACACCA
AAGACTGGGGCTCTCGAGAAGAAACGAGTCCGGTTTGCGGGAGTGGATGG
ACAGGCATGCCCAAGCTTCAGCACGGAGTGCAAGGACTATGAGGAAAACG
AGAGTTGTAATTCTCGTCGTAAGGTTCTGTTGAGCGGCACCAGAGCCAAT
GTTGGGGACAGAGCCCCCAAAGTTGAAGTTTGCGCTTCTTCTGACAACCG
CAACCAGTTTGATGAAAGGTCTTACGAAATGCCATCATCAGAGAGAGACC
AGAGTACAACCCCATTCTCAGTACGTCAGTCAAACAAGTGTGAAATACTT
CCATCAGTTTCACCTGACAAGCTGGGGATTGTACCATCCCCCAGCCCTCC
GATTCCGGAAGGCGAATCGCAAGAATTACGACGACCGAGCTCAATTGGCG
TCGTGAATGAAACGAAACCCAGGTTGAAACGTGCCGAAAAAAGAATCGCG
TTCTTGAAAGATTATTTCTCCCAGAACCTCCCTTCATTGCAGAATCAATC
CAAATGCAATGGGGTTTACGGGAGCGAATCATCGATGACAGAATTTCAAA
GTACTGTCATGGATGTAGAAGAGGTGGTTAGCCCCCTTCCCGGGGCATAC
AAGGCTTCATGTTCCTCATCAGACTCTGTCAAGGCGAAGAACGAACTAGT
GATCTCGACTGAGAGGACGAGATTCGATGACATTCACTCGGAAGCAAACT
CGAGAAATCTTTCGACGTCATCGAATGAGTACAATGGAAGTGGTGAGGAA
ATAACCGCTAGAAAATGTGTCGGTATTATGTTCCGAACATTTGATATACT
CAAAGATTATCTGGGATCATCATCACCAGGGAAATTATCCTCTGATTGGT
TTCACTTGATCGAGGTACCTGATGAAGAGGAGTAG
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