Ggra10176.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10176.t1
Unique NameGgra10176.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length839
Homology
BLAST of Ggra10176.t1 vs. uniprot
Match: A0A2V3IZ62 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ62_9FLOR)

HSP 1 Score: 314 bits (804), Expect = 1.200e-90
Identity = 262/881 (29.74%), Postives = 391/881 (44.38%), Query Frame = 0
Query:    1 MKLTDTTKCKQAAALAAVNLPEI---------QPLPPSSTXXXXXXXXXXXXXXXXXIQPAVANGTPAVKSEPTSASW-----------MISRDPSPERFPVECKLRTVQTPQPSQPHQTPKPTPAIGKRPLLHPEPEHRHLPDPRPSKKRRAQEIDKPTAKRPKTNNQHLILSPGYSFQTTRAPIAKSDFMFPVLLEEGSAKPKWAACLLCCSAPSPKAFIYFKKLPLKKSRLHTHFNTSHRAFMGEQKYTCLDPDQKIAFIRKGVSTFDVFKNNNHIRSLESSPNWNCHEFDRLFRSYSSFADLRSFAVQNFDQGPAKSHEAKKSARPTATKQKVSDRPFSNTRKLLGLEPVPSTQGREKKIRKQLSNLFNQGSKDVKETASPSFCTK----------------DPEHSCGRRNLTNDTELQSDIFRFTRNPIEGTLSGAIAYKNLKQWIRGSGRRAHENIQLLVLGDMLGDPLNDNSATANNAFLNPISFHSLNELDSPEERSG---KRSN---FRPLSVLTLFYLMRGVPCPVIAELVDAMTAGEQNGANERAGSILPLIVQGGNSMCAENLRLMRNALDEEHQYNWALVLLTRPCPELDEDGVEVLVAVRNCKMVRCDLHVVSVRLAEGIDDRILPFFDAICTDWKRRFVGINSGIDGSDLKRKAVERKLFEVLQAVEGVEEVRLIDKEVGRDGRPIFSDVVADMSDEDFSDFVDWHEKRFEKYLSKARLISARKALVQ--SGRVKDGYGAQPTSEPNNTDLYHNRELQLSVQD--WVPFDE-LRDFAYTLKPLYEKFGELTNQSGCIRAGVTCGRMRYEKTIVDAGLERVFHARSLMKAWCMTKIGEGKVPSPKTRSQMS----IWEDNWSNAMR 830
            M+ TDTT  + AAALAA NL E+         +P+    T                    A+ +   A++  P+  +            + S  P   + P E  L+   T  PS        T    K      E E R        +KR  +  + P  KR + N   L L+ G+      +    S+ M     ++ +  P W AC LC    SP   IY +K P K +++ TH    H     +  Y+ +DP QK+ F+R   S+F+  +    +R+ + + +WN  E+ R++ S     DL    V N  +    S E     RP   +  +S      T+++     V + Q + K+  K+L+    Q    +  + + S C+                 DPE++ G  N   +   + D  +       G    +  Y  L           H  I  LV+G  L DP +  S T ++AFL P ++     LD PE R G   ++ N    R LS +TLFYL+RG  C +IA ++D MT   +    +  GS+LPLIV  GNS+CAE+LR++RN L+    YNWA  L+TRPCPEL   G+E+++ +R     R DLH+VSVR  +     +L   DA+C +WK R  GINSG+   D++RK VER +FE +   +GV+ + L+  E     R    +  + MS+E+F+  V  H  R    +    LI   K+L +  + R  D     P   P  +    N +   S  D  W      L+ FA  L+PLYE   E  +Q GC+RAG+       E+ I D  LER+FHARSL+K W   ++       P  R   +    IWE NWSN  R
Sbjct:    1 MQSTDTTDAQHAAALAAANLMEVDEDTRPVMSEPMSIDGTATRSKIKREAQQQVPISKPSALRSNPVAMQPRPSEVTMKRTQAFPAGDDISSAKPLAPQHPCEAALKPSNTKVPSA-------TKRFRKEESSPVEKEDRDQ-----VRKRSLETGETPAPKRQRINGCAL-LAKGFELHRIGSEQWPSELMIIASRDDKNGNPLWGACALCSRGSSPNN-IYTQKHPFKLNKVRTHLRKQHPEEEWKN-YSAMDPHQKLEFLRDRPSSFEKIR-KFVMRASKGAGSWNDAEYTRIYLSNEPIEDL----VSNTMKSATVSKE-----RPPRFQDDLS------TQRM-----VSANQSKVKETHKKLTRATRQEQPHINFSPTASMCSNGWQSFISTLPSILHSDDPENNAGHFNSRQEVNWEQDAVKVAPRSPRGFFEASKEYLALTSHFPKHTVWTHLEIPRLVVGGPLRDPWSPKSQTLDDAFLMPSTY-----LDLPERRVGLITRKGNEHCTRLLSAITLFYLVRGFSCSMIARVLDLMTDESEAIDGKPTGSLLPLIVCVGNSICAESLRVLRNELNRNEDYNWAFPLVTRPCPELSNSGIEIIIPLRTRLRERYDLHLVSVRCQKDAGKTVLKILDAVCQEWKIRLSGINSGVPRDDIRRKDVERAIFEAIVKSDGVQHMVLVSMECPESKRLSSPEAFSTMSEEEFAGLVKSHATRLGTIIRPDNLIDDHKSLPEMIAARSCDEEFV-PEEHPKRSRDGRNSDPCNSEFDRKWRGLPSTLKVFAEGLRPLYESHEEPLSQPGCLRAGIFDTEFLSEQGI-DPLLERIFHARSLLKVWASQELPVNCRYGPPNRKHTANTAGIWEGNWSNLSR 838          
The following BLAST results are available for this feature:
BLAST of Ggra10176.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IZ621.200e-9029.74Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..144
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..147
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 299..313
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 297..324

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:8007..10523 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10176.t1Ggra10176.t1Gracilaria gracilis GNS1m malemRNAtig00000016_pilon 8007..10523 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10176.t1 ID=Ggra10176.t1|Name=Ggra10176.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=839bp
MKLTDTTKCKQAAALAAVNLPEIQPLPPSSTAPSASTAVPASVLIPASIQ
PAVANGTPAVKSEPTSASWMISRDPSPERFPVECKLRTVQTPQPSQPHQT
PKPTPAIGKRPLLHPEPEHRHLPDPRPSKKRRAQEIDKPTAKRPKTNNQH
LILSPGYSFQTTRAPIAKSDFMFPVLLEEGSAKPKWAACLLCCSAPSPKA
FIYFKKLPLKKSRLHTHFNTSHRAFMGEQKYTCLDPDQKIAFIRKGVSTF
DVFKNNNHIRSLESSPNWNCHEFDRLFRSYSSFADLRSFAVQNFDQGPAK
SHEAKKSARPTATKQKVSDRPFSNTRKLLGLEPVPSTQGREKKIRKQLSN
LFNQGSKDVKETASPSFCTKDPEHSCGRRNLTNDTELQSDIFRFTRNPIE
GTLSGAIAYKNLKQWIRGSGRRAHENIQLLVLGDMLGDPLNDNSATANNA
FLNPISFHSLNELDSPEERSGKRSNFRPLSVLTLFYLMRGVPCPVIAELV
DAMTAGEQNGANERAGSILPLIVQGGNSMCAENLRLMRNALDEEHQYNWA
LVLLTRPCPELDEDGVEVLVAVRNCKMVRCDLHVVSVRLAEGIDDRILPF
FDAICTDWKRRFVGINSGIDGSDLKRKAVERKLFEVLQAVEGVEEVRLID
KEVGRDGRPIFSDVVADMSDEDFSDFVDWHEKRFEKYLSKARLISARKAL
VQSGRVKDGYGAQPTSEPNNTDLYHNRELQLSVQDWVPFDELRDFAYTLK
PLYEKFGELTNQSGCIRAGVTCGRMRYEKTIVDAGLERVFHARSLMKAWC
MTKIGEGKVPSPKTRSQMSIWEDNWSNAMREVQSEKSE*
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