Ggra604.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra604.t1
Unique NameGgra604.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length768
Homology
BLAST of Ggra604.t1 vs. uniprot
Match: A0A2V3IVI3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVI3_9FLOR)

HSP 1 Score: 223 bits (568), Expect = 7.020e-59
Identity = 252/802 (31.42%), Postives = 364/802 (45.39%), Query Frame = 0
Query:    1 MDEVLSLKPSVAIKRLQAAVRESQGTTRASYAVKNRPEWWKENLNVTLPDDTIAKTGAFVSHSKCAWKPEQVQAALVLFYHHLNGDNFSEPQDPLESNG---ITPPRSRTKDEQVKLELRPVR-TRN-RTGRARLRAVHAPHLSSQKFASEPLIRSPRPPDRKKGVTFQDEHEVNVHHTPPRNFQRKKRGPIKITPEPSHESSPSTATSSYRLDKTKELNEANLESDTEQQQSSPSPSPVRRAAPRRLGRKASVKEPPALIHTRSNSIRQNLSGSMKEESVSNKAHHESRLISKK-KRKQRVHKTAESGTKLSPEV-IVIHSDASPAIGSGSKTESKLSPSVTLPISRRRSSRLSTAEDLTPTQEHGVKRTLDDTLAEVRTPLVTLKNQENKTVTRDSKRRKTPGKKVVVRSTRKSSRKAA-GGANLTLDNVVVQKENMHPRGDSITEANGADSQLVLRGPQSPRLRSPRRTSQPPGVSHQERLDDASVEDSEENCEALVENAVHEEGVGKGTINEDDKELDEDEDEEAMTEEEKKEHYDAFMTAIARMEKERDKCCAKLEAYRQIKCEALQNEVEQKVNNLNHLCKMRLMRMSEQELSTLVGQMVYELDGDVNNLLVKEMEGVADSI-----------LNEGGDGVAPEAGSSSVRMQLEALKTPKARSLRKAVAAATTERKRVNRERCVATR---ASVRRSTRKAAQTATARTREMLASAARPKNVASIRNNVGTAEQRGDTETEGM-------------SAPVMAAVASEIARLRGMTNSREGLRAFKAQLDNAFGEIV 767
            MD V SL     ++ LQ AVRE+QG+ RASYAVK+RPEWW E   V LPD T A TG F+SHSK AW   QV+AALVL+Y HLNGD   EP             PPRS+    +  +   P R TR+ +   A +   H    S+   A+E    SPR          + +  VN     PR+ + K +   +I    S   S + A+   R   +     +    +T+++    +P  + R  PR  G    ++  P     RS      +  +   ++ S K  +E+R  SK  KR  RV     S T   P+  + I ++   +      +    SP       RR  +     +  T T    +KR+L  T +E RTPL  L++  N+   R  KRRK        +S +K S+     GA +   +V+V+KEN  P     T+  G D         SP   S ++  Q      QERL+D    ++       V+N     GV  G+ +E+DK         AM   E+K + +  M  I  +EK R +   K++     +   ++ ++E   +      K++ M M ++ELSTLV  MVY+  GD + +LVK  E  A  I           +  G DG A    +  VR   EA KTP+ARSLR AVA AT E+KR+N ERC ATR    +VRRS RKAAQ AT RT+ +L+           R   G   Q  D++ EG              S      + +E+ RLR + N  + L   KA++D+AF  ++
Sbjct:    1 MDGVCSLSLRTGVRLLQTAVRETQGSKRASYAVKDRPEWWNEKHQVELPDGTSAVTGRFISHSKSAWTLPQVKAALVLYYRHLNGDE--EPSSATHQQSRHESVPPRSQAPKTEESVSSNPSRVTRSQKKEEALIEDSHGQIPSTHATATEDA--SPR------ATRARLKKPVNRTRPIPRHARGKSKA-RRIVISDSEAESSALASPIKRHQSSSHTQHSVQSFETQKRNKCTNPGRINRR-PRAKGENEEIEAQPEEEQGRSERRSAQMVKAPAAKTCSPKKRNENRKPSKTIKRSVRVRPRGPSKTAPLPQTNLAIKAEVQES------STRDASPGPPKKEKRRHETVPKAEKQTTATNSLRLKRSLISTHSECRTPLAPLQDIANENANRCLKRRKLDRADSFDKSKQKRSKNGGLSGAEVEEGDVIVEKENERPS----TDDTGVDV--------SPVATSCKKAKQGGESMAQERLEDGIALEASNEVVVDVDN-----GVYNGSEDEEDK--------AAMAAAEEKRN-EQIMALIEELEKARGEALQKMDDKCTSQVRNVETQLEAYQSKQRRTGKVQRMHMRKEELSTLVRDMVYKYKGDTDQILVKGFESAAQEIVQRFNGAGASEIERGNDGHA----NGGVRFADEA-KTPRARSLRSAVAMATAEQKRLNYERCEATRNVRGTVRRSQRKAAQAATERTKRILSR-------YRGRTEGGMVAQEQDSDVEGTGRSEDANANGGDGSEEAFTTIQAEMCRLRALPNGAQALAVLKAKVDDAFRRLM 746          
The following BLAST results are available for this feature:
BLAST of Ggra604.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IVI37.020e-5931.42Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 649..669
NoneNo IPR availableCOILSCoilCoilcoord: 506..526
NoneNo IPR availableCOILSCoilCoilcoord: 560..580
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 220..234
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..365
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 284..298
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..175
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 320..355
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 382..487
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..105
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 258..274
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 193..208
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 392..407

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000203_piloncontigtig00000203_pilon:120874..123177 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra604.t1Ggra604.t1Gracilaria gracilis GNS1m malemRNAtig00000203_pilon 120874..123177 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra604.t1 ID=Ggra604.t1|Name=Ggra604.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=768bp
MDEVLSLKPSVAIKRLQAAVRESQGTTRASYAVKNRPEWWKENLNVTLPD
DTIAKTGAFVSHSKCAWKPEQVQAALVLFYHHLNGDNFSEPQDPLESNGI
TPPRSRTKDEQVKLELRPVRTRNRTGRARLRAVHAPHLSSQKFASEPLIR
SPRPPDRKKGVTFQDEHEVNVHHTPPRNFQRKKRGPIKITPEPSHESSPS
TATSSYRLDKTKELNEANLESDTEQQQSSPSPSPVRRAAPRRLGRKASVK
EPPALIHTRSNSIRQNLSGSMKEESVSNKAHHESRLISKKKRKQRVHKTA
ESGTKLSPEVIVIHSDASPAIGSGSKTESKLSPSVTLPISRRRSSRLSTA
EDLTPTQEHGVKRTLDDTLAEVRTPLVTLKNQENKTVTRDSKRRKTPGKK
VVVRSTRKSSRKAAGGANLTLDNVVVQKENMHPRGDSITEANGADSQLVL
RGPQSPRLRSPRRTSQPPGVSHQERLDDASVEDSEENCEALVENAVHEEG
VGKGTINEDDKELDEDEDEEAMTEEEKKEHYDAFMTAIARMEKERDKCCA
KLEAYRQIKCEALQNEVEQKVNNLNHLCKMRLMRMSEQELSTLVGQMVYE
LDGDVNNLLVKEMEGVADSILNEGGDGVAPEAGSSSVRMQLEALKTPKAR
SLRKAVAAATTERKRVNRERCVATRASVRRSTRKAAQTATARTREMLASA
ARPKNVASIRNNVGTAEQRGDTETEGMSAPVMAAVASEIARLRGMTNSRE
GLRAFKAQLDNAFGEIV*
back to top