Ggra613.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra613.t1
Unique NameGgra613.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length182
Homology
The following BLAST results are available for this feature:
BLAST of Ggra613.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001820Protease inhibitor I35 (TIMP)PFAMPF00965TIMPcoord: 20..160
e-value: 5.5E-7
score: 29.6
IPR008993Tissue inhibitor of metalloproteinases-like, OB-foldGENE3D2.40.50.120coord: 22..166
e-value: 2.1E-14
score: 55.5
IPR008993Tissue inhibitor of metalloproteinases-like, OB-foldSUPERFAMILY50242TIMP-likecoord: 22..164
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..181
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000203_piloncontigtig00000203_pilon:145591..146136 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra613.t1Ggra613.t1Gracilaria gracilis GNS1m malemRNAtig00000203_pilon 145591..146136 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra613.t1 ID=Ggra613.t1|Name=Ggra613.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=182bp
MRLVISVAFLVLILQVNVCQACTCLFSTFKESYDRADTVVIAKVVAREVL
PTPDPPKCLTSKPPCLIPQILFNNIRFKFELVRIFKGCGPSSNTFFGDTS
ASSASCGIGFKVGELYMLNLGKEMKAFDGAKAFFVNICQGNLLVKSLTKE
QIKQLFECYKLPENQCLPSKLTPYDVTALSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001820TIMP
IPR008993TIMP-like_OB-fold