Ggra602.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra602.t1
Unique NameGgra602.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length543
Homology
BLAST of Ggra602.t1 vs. uniprot
Match: A0A2V3IVQ1 (RING-type domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVQ1_9FLOR)

HSP 1 Score: 545 bits (1404), Expect = 4.390e-186
Identity = 310/530 (58.49%), Postives = 363/530 (68.49%), Query Frame = 0
Query:   42 AMXXXXXXLPVATAIIITAPEACGGSRVVKHSTAFFGPNADGSAIANCNVPLFPPRAQRDGAYVRLMSRVGRKHVHTLRSAAKSLFVGMVFGRVPDAVLLSDAPP--QIPLLETAAISVRARTTSDAWKNDPQKPAPTVGPTESPVPSSHTRQVLQSAPSY-EFIASAPRERPHAQSSPSLDPSAFALFDACCQLSVSADLQAVKGAVAVVARGVCDFAQKVRHMQDAGALGVIVVNFKDEGDHLANMKLNQSKTNPEINIPAVMIRYRDWARIAPCWNETNIIFTSEGEAQGDYGHDALNWAMMRGMALWILCQCGVNVVRYKRRVSEYRARADAIAALPVETYHRNGHAEAPSTQEEVTPLLADTSEPEXXXXXXXXXXXXXX------------------------PAPSSSVMDHH--AERVNLLHSQPQAGPSCPLAPASAPSSSSTVPHEAVESEEEEPICAVCLEEFESGQQVRLLACSHLYHRSCIDPWLQSSSNSCPLCKREIPNLPPPPTQLHYGSMLIS 542
            AM      LPV  AI++ APE+CGG RV+KH+ A FG   D  A  N +  +F PR QRDGAY+R+        + TL SAA SLF+ M+FGR PD + ++D PP  QI LLE +A+S R R  +  W ++P  P  +V P         T+ +L++  S+ +  A+A R   +   SPSLDPS   L+DACCQLSV+ADLQA++G VAVV RGVCDFAQK+  MQDAGA GVIVVNFKDEGDHLANMKLN++K +P I IPAVMIRYRDWA IAPCWN+T + FT++GEA+GD+  D LNWAMMRGMALWILCQCGVNVVRYKRRVSEYRARADAIAALPVETY    H +  S  EE   LL+DTSEPE  XXXXXXXXXXXX                        PAPS+         ++ N   ++ Q G S   AP      S T P E  ESEEEEPICAVCLEEFE GQQVR LACSHLYHR+CIDPWLQSSSNSCPLCKREIP+LPPPP Q HYGSML+S
Sbjct:  108 AMLLLLLALPVVAAILVKAPESCGGERVIKHANALFGLKPDDPAFNNRDFAIFAPRPQRDGAYIRINPVSRPSAISTLHSAATSLFIAMLFGRAPDTIRVTDPPPPPQISLLEPSALSARVRRANPPWNSNPAAPRASVAPHRQ------TQSLLETIASFGDPSATASRSNTNRPPSPSLDPSPSPLYDACCQLSVTADLQAIQGRVAVVTRGVCDFAQKIGFMQDAGAQGVIVVNFKDEGDHLANMKLNETKQDPHITIPAVMIRYRDWAEIAPCWNDTIVTFTAKGEAKGDHARDNLNWAMMRGMALWILCQCGVNVVRYKRRVSEYRARADAIAALPVETYQHRNHRDQ-SVPEERAHLLSDTSEPETNXXXXXXXXXXXXXXXXXXXXXXXXXVQSIPNKSAAGPAPSTPXXXXGPPTDQPNRTRTESQPGSSSAHAPQLL---SPTRPPEDAESEEEEPICAVCLEEFEPGQQVRQLACSHLYHRTCIDPWLQSSSNSCPLCKREIPSLPPPPAQFHYGSMLVS 627          
BLAST of Ggra602.t1 vs. uniprot
Match: R7Q8Z4 (RING-type domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8Z4_CHOCR)

HSP 1 Score: 306 bits (783), Expect = 1.630e-97
Identity = 160/282 (56.74%), Postives = 193/282 (68.44%), Query Frame = 0
Query:  263 MQDAGALGVIVVNFKDEGDHLANMKLNQSKT-NPEINIPAVMIRYRDWARIAPCWNETNIIFTSEGEAQGD--YGHDALNWAMMRGMALWILCQCGVNVVRYKRRVSEYRARADAIAALPVETYHRNGHAEAPSTQEEVTPLLADTSEPEXXXXXXXXXXXXXXPAPSSSVMDHHAERVNLLHSQPQAGPSCPLAPASAPSSSSTVPHEAVESEEEEPICAVCLEEFESGQQVRLLACSHLYHRSCIDPWLQSSSNSCPLCKREIPNLPPPPTQLHYGSMLI 541
            MQDAGA+GVIVVN KD  D LANMK+N +K  + ++ IPAVMI + DW  I PC N+T + FT+EGEA  D  +G DALNW MMRGMALWILCQCGVNVVRYKRR+SE+RARADAIAALPVETY R       +  ++ T +  ++S  +              PAP+S ++DH  ER  L+ S      +           +ST   +  + EEEE +CAVCL+ FE+GQQVR LAC HLYHR CIDPWLQSSSN CPLCKRE+PNLPPPPTQLHYGSM +
Sbjct:    1 MQDAGAVGVIVVNRKD-ADKLANMKVNDTKELSTQVTIPAVMISHHDWNTILPCRNDTKVAFTAEGEASFDIDFGRDALNWTMMRGMALWILCQCGVNVVRYKRRMSEFRARADAIAALPVETYSR-----PENMHDDDTSVAEESSHTDQCVTESIPAPKVAGPAPTSPILDHDPERAGLIASSDGESVAAXXXXXXXXXXASTAFEDERDGEEEESVCAVCLDNFETGQQVRFLACGHLYHRVCIDPWLQSSSNCCPLCKREVPNLPPPPTQLHYGSMSV 276          
BLAST of Ggra602.t1 vs. uniprot
Match: A0A5J4YWS7 (E3 ubiquitin-protein ligase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YWS7_PORPP)

HSP 1 Score: 260 bits (665), Expect = 1.020e-77
Identity = 185/498 (37.15%), Postives = 239/498 (47.99%), Query Frame = 0
Query:   55 AIIITAPEACGGSRVVKHSTAFFGPNADGSAIANCNVPLFPPRAQRDGAYVRLMSRVGRKHVHTLRSAAKSLFVGMVFGRVPDAVLLSDAPPQIPLLETAAISVRARTTSDAWKNDPQKPAPTVGPTESPVPSSHTRQVLQSAPSYEFIASAPRERPHAQSSPSLDPSAFALFDACCQLSVSADLQAVKGAVAVVARGV--CDFAQKVRHMQDAGALGVIVVNFKDEGDHLANMKLNQSKTNPEINIPAVMIRYRDWARIAPCW-NETNIIFTSEGEA--QGDYGHDALNWAMMRGMALWILCQCGVNVVRYKRRVSEYRARADAIAALPVETYHRNGHAEAPSTQEEV--------TPLLADTSEPEXXXXXXXXXXXXXXPAPSSSVMDHHAERVNLLHSQPQAGPSCPLAPASAPSSSSTVPHEAVESEEEEPICAVCLEEFESGQQVRLLACSHLYHRSCIDPWLQSSSNSCPLCKREIPNLPPPPTQLHYGSM 539
            A+++ APE CGG+ V  H++A FGP+    ++    V LF PR Q  G YV   S                          PD    +    +   L  +A    A T S +  + P KP            S  T                                   LFD C  LSV  D+   K AV V+ RG   CDF +KVR+MQ  GA GVI+VN++ +GD L NMKLN +  +  I IP++M+ +R+WA++APC  N  ++ F++EGEA    DYG +ALNWAMMRGMALWI  QCGVN+VR KRR SE  AR DAI ALPV TY +     A +                LAD                 XX         H  ER  L       GPS          +S  +P  + E +E+EP+CA+C++ FE G QVR L CSH+YH++CIDPWL  SS +CP+CKREIPNLPP      YGS+
Sbjct:   21 ALVVHAPEKCGGAHVATHASALFGPSTHDGSLHG--VRLFAPRPQNRGKYVTSSSEG------------------------PDDDGEAGGVDEEDGLRRSAAHAGALTKSLSASSSPSKP------------SKETE----------------------------------LFDGCKPLSVEKDIALAKDAVVVLVRGPGPCDFERKVRNMQKVGARGVIIVNYQSQGDRLVNMKLNNTSKSDTITIPSLMVLWREWAQLAPCRENNISVSFSAEGEAAFDFDYGREALNWAMMRGMALWIFFQCGVNMVRLKRRHSELTARVDAIEALPVRTYTKRRTTSASAXXXXXXXXXXXXXATCLADGGS-YAAADARKGNTSAXXXXXXXXXXXHGTERTRLR------GPSQEQPDVPVTQNSVRLPQTSDE-DEDEPMCAICIDNFEEGDQVRELECSHIYHKACIDPWLYQSS-TCPVCKREIPNLPPTAANA-YGSL 436          
BLAST of Ggra602.t1 vs. uniprot
Match: A0A7S1TLM0 (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TLM0_9RHOD)

HSP 1 Score: 161 bits (407), Expect = 1.320e-42
Identity = 102/233 (43.78%), Postives = 128/233 (54.94%), Query Frame = 0
Query:  309 WARIAPCWNETNIIFTSEGEAQGD--YGHDALNWAMMRGMALWILCQCGVNVVRYKRRVSEYRARADAIAALPVETYHRNGHAEAPSTQEEVTPLLADTSEPEXXXXXXXXXXXXXXPAPSSSVMDHHAERVNLLHSQPQAGPSCPLAPASAPSSSSTVPHEAVESEEEEPICAVCLEEFESGQQVRLLACSHLYHRSCIDPWLQSSSNSCPLCKREIPNLPPPPTQLHYGSM 539
            WA  A   +   +  T+ GEA  D  YG DALNWAMMRGMALWIL QCGV++VR KRR SE  ARA AI  +PV T+ R             T  +   SEP                A   S +D       ++ +   AG     A A A   S+       + E++ P+CAVCLEEFE G  +R LAC+H+YH+ CIDPWL  SS +CP+CKREIPNLPPPP+   YG++
Sbjct:    8 WAGAAN--SNVTVSMTAAGEASFDLDYGRDALNWAMMRGMALWILFQCGVSIVRLKRRHSEMTARATAIQNMPVCTFSRPPRV--------FTRSVPRGSEPLATFDHVGGSGGGAGTAEGGSELD-----AEVVPTASHAGDDGRRAAAGATVISTGA---NTDDEDDAPVCAVCLEEFEDGDLLRQLACTHMYHKECIDPWLAQSS-ACPVCKREIPNLPPPPSLNAYGAL 221          
BLAST of Ggra602.t1 vs. uniprot
Match: A0A7S0BJD8 (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BJD8_9RHOD)

HSP 1 Score: 117 bits (294), Expect = 4.490e-28
Identity = 60/105 (57.14%), Postives = 72/105 (68.57%), Query Frame = 0
Query:  273 VVNFKDEGDHLANMKLNQSKTNPEINIPAVMIRYRDWARIAPCWNET-NIIFTSEGEAQGD--YGHDALNWAMMRGMALWILCQCGVNVVRYKRRVSEYRARADA 374
            +VN+K +G+ L NMKLN S +  ++ IP+VMI Y +W +IA C  +   + FT EGEA  D  YG D L WAMMRGMALWIL QCGVNVVRYKRR     AR DA
Sbjct:    1 IVNYKKDGNRLWNMKLNGSTSELDVKIPSVMITYTEWRKIAGCRTKALTVSFTEEGEANYDIDYGKDVLTWAMMRGMALWILLQCGVNVVRYKRRNRHLNARYDA 105          
BLAST of Ggra602.t1 vs. uniprot
Match: A0A1X6PG06 (RING-type domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PG06_PORUM)

HSP 1 Score: 100 bits (249), Expect = 9.800e-19
Identity = 147/532 (27.63%), Postives = 191/532 (35.90%), Query Frame = 0
Query:   56 IIITAPEACGGS-RVVKHSTAFFGPNADGSAIANCNVPLFPPRAQRDGA--------YVRLMSRVGRKHVHT-LRSAAKSLFV---GMVFGRVPDAVLLSDAPPQIPLLETAAISVRARTTSDAWKNDPQK---PAPTVGPTESPVPSSHTRQVLQSAPSYEFIASAPRERPHAQSSPSLDPSAFALFDACCQLSVSADLQAVKGAVAVVARGVCDFAQKVRHMQDAGALGVIVVNFKDEGDHLANMKL--NQSKTNPE-------------------------------------INIPAVMIRYRDWARIAPCWNE-TNIIFTSEGEA--QGDYGHDALNWAMMRGMALWILCQCGVNVVRYKRRVSEYRARADAIAALPVETYHRNGHAEAPSTQEEVTPLLADTSEPEXXXXXXXXXXXXXXPAPSSSVMDHHAERVNLLHSQPQAGPSCPLAPASAPSSSSTVPHEAVESEEEEPICAVCLEEFESGQQVRLLACSHLYHRSCIDPWLQSSSNSCPLCKREIPNLPP 529
            +++ AP  CGGS RV+ H+ A FGP A    + +  +   P     D A         +  +SR  R H+   LR +A SL               V   +  P  PL +T   S  A + +      P     P    G T +                    A  PR    A ++PS++ S     D C  +  S  L    GA   +ARG C F  KV   Q AGA GV+V+N   EG+HLANM+   N+S+  P                                      + IPAVMI   DWA + PC     N  FT EGEA    DYG DALN A++RGMA       G                A   +A                   +   LL   +        XXXXXXXXX                                                    + +CAVCL+ F +G  V  L C H+YH  CI PWL +SS  CP+CKR +  LPP
Sbjct:   59 LVVDAPARCGGSHRVLPHAGAMFGPAAADGLVLSVPLVALPRPGSGDPAPPPAAPLSRLASLSRPRRLHLPAALRLSAPSLSAPGPAXXXXXXXXPVASREGVPPPPL-DTDCGSATAPSVAVGRAARPASRLSPGAVAGATLALXXXXXXXXXXX-----XXAAGGPRSGAPA-AAPSVEASLPG--DGCGAMDPSPSLA---GAAVAIARGGCPFYAKVLAAQAAGAAGVVVINAPAEGNHLANMERAHNESQALPSASGAXXXXXXXXXXXXXXXXXXXXXXXDAPSAADDAGVRIPAVMISAADWASLVPCLGGGVNASFTGEGEATLDVDYGRDALNGALVRGMA------AGSXXXXXXXXXXXXXXXAPGPSAAKXXXXXXXXXXXXXXEPSDTAALLPQRAALVAGAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------DEVCAVCLDAFVAGVLVTPLPCGHVYHAGCISPWLLTSS-VCPVCKRVVGGLPP 549          
BLAST of Ggra602.t1 vs. uniprot
Match: A0A7S0G1Q5 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G1Q5_9RHOD)

HSP 1 Score: 88.2 bits (217), Expect = 1.640e-17
Identity = 41/69 (59.42%), Postives = 53/69 (76.81%), Query Frame = 0
Query:  472 SEEEEPIC-AVCLEEFESGQQVRLLACSHLYHRSCIDPWLQSSSNSCPLCKREIPNLPPPPTQLHYGSM 539
            S+ +EP+C A+CL++FESGQ  R LAC+H+YH+ CIDPWL  SS SCP+CKR I  LPPP +   YGS+
Sbjct:   33 SDSDEPLCCAICLDDFESGQTARQLACNHVYHKECIDPWLLQSS-SCPICKRVIGELPPPLSNDFYGSV 100          
BLAST of Ggra602.t1 vs. uniprot
Match: K3WUB1 (RING-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUB1_GLOUD)

HSP 1 Score: 79.0 bits (193), Expect = 3.970e-12
Identity = 75/297 (25.25%), Postives = 119/297 (40.07%), Query Frame = 0
Query:  246 VAVVARGVCDFAQKVRHMQDAGALGVIVVN--FKDEGDHLANMKLNQSKTNPEINIPAVMIRYRDWARI------APCWNETNIIFTSEGEAQGDYGHDALNWAMMRGMALW-ILCQCGVNVVRYKRRVSEY---RARADAIAALPVETYHRNGHAEAPSTQEEVTPLLADTSEPEXXXXXXXXXXXXXXPAPSSSVMDHHA-------ERVNLLHSQPQAGPSCPLAPASAPSSSSTVPHEAVESEEEEPICAVCLEEFESGQQVRLLACSHLYHRSCIDPWLQSSSNSCPLCKRE 523
            VA+V RG C+F QKV + Q A A  VIV++   + E      M+ +Q  +N  I+IP+V + Y   A+I      AP W+   +     GE       ++L   ++  + L  ++C     +      + ++   R R  A   LP+  Y R+        Q  +   L +                         V+DH         E  ++      +   C  A                       +CA+CLE+F+ G  V++L C H YH  CIDPWL+  S+ CPLCK++
Sbjct:   84 VALVVRGECNFVQKVWNAQRANATAVIVMDNELRVEAPFHIIMQKDQHASN--IHIPSVFVSYTAGAKILHALRHAPPWSPVRVTLNQHGELPNSKTTNSLLKRIVAYIFLVSVVCVFSSGLSLISSTMFQFIGKRRRTRASRKLPLARYQRD-------LQRMLLQQLVEEQH----------------------VIDHITLDDLGDDEEYDIAFGTIGSHEGCGDA----------------------EVCAICLEDFQVGHNVKVLPCQHFYHVECIDPWLERQSSCCPLCKQD 327          
BLAST of Ggra602.t1 vs. uniprot
Match: E3 ubiquitin-protein ligase RNF13 n=1 Tax=Homo sapiens TaxID=9606 RepID=UPI00102D6799 (E3 ubiquitin-protein ligase RNF13 n=1 Tax=Homo sapiens TaxID=9606 RepID=UPI00102D6799)

HSP 1 Score: 70.9 bits (172), Expect = 9.780e-12
Identity = 24/51 (47.06%), Postives = 39/51 (76.47%), Query Frame = 0
Query:  474 EEEPICAVCLEEFESGQQVRLLACSHLYHRSCIDPWLQSSSNSCPLCKREI 524
            +E  +CA+CL+E+E G ++R+L CSH YH  C+DPWL  +  +CP+CK+++
Sbjct:   21 DEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKV 71          
BLAST of Ggra602.t1 vs. uniprot
Match: A0A7S0BHE5 (Hypothetical protein (Fragment) n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BHE5_9RHOD)

HSP 1 Score: 72.0 bits (175), Expect = 1.460e-11
Identity = 46/105 (43.81%), Postives = 69/105 (65.71%), Query Frame = 0
Query:  183 SPVPSSHTRQVLQSAPSYEFIASAPRERPHAQSSPSLDPSAFALFDACCQLSVSADLQAVKGAVAVVARGVCDFAQKVRHMQDAGALGVIVVNFKDEGDHLANMK 287
            +P PS  TR+ L+   S   IA++ R+  ++ +SP ++     L D C  L+   DL+AVK  +AV+ARG CDF+ KV +MQ++GALG ++VN+K +GD L NMK
Sbjct:   31 TPWPS--TRRALKK--STHSIAASTRDE-NSSASPVIE----LLHDGCKPLTEPNDLKAVKSKIAVIARGSCDFSTKVLNMQESGALGAVIVNYKKDGDRLWNMK 126          
The following BLAST results are available for this feature:
BLAST of Ggra602.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IVQ14.390e-18658.49RING-type domain-containing protein n=1 Tax=Gracil... [more]
R7Q8Z41.630e-9756.74RING-type domain-containing protein n=1 Tax=Chondr... [more]
A0A5J4YWS71.020e-7737.15E3 ubiquitin-protein ligase n=1 Tax=Porphyridium p... [more]
A0A7S1TLM01.320e-4243.78Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A7S0BJD84.490e-2857.14Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A1X6PG069.800e-1927.63RING-type domain-containing protein n=1 Tax=Porphy... [more]
A0A7S0G1Q51.640e-1759.42Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
K3WUB13.970e-1225.25RING-type domain-containing protein n=1 Tax=Globis... [more]
E3 ubiquitin-protein ligase RNF13 n=1 Tax=Homo sapiens TaxID=9606 RepID=UPI00102D67999.780e-1247.06E3 ubiquitin-protein ligase RNF13 n=1 Tax=Homo sap... [more]
A0A7S0BHE51.460e-1143.81Hypothetical protein (Fragment) n=2 Tax=Rhodosorus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 479..520
e-value: 1.6E-8
score: 44.4
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 478..521
e-value: 7.0E-13
score: 48.7
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 479..521
score: 13.226928
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 456..526
e-value: 8.9E-20
score: 71.7
NoneNo IPR availableGENE3D3.50.30.30coord: 186..324
e-value: 3.2E-19
score: 71.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 388..429
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 162..191
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 386..471
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availablePANTHERPTHR22765:SF334RECEPTOR HOMOLOGY REGION, TRANSMEMBRANE DOMAIN- AND RING DOMAIN-CONTAINING PROTEIN 1coord: 227..283
NoneNo IPR availablePANTHERPTHR22765RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAININGcoord: 227..283
coord: 462..523
NoneNo IPR availablePANTHERPTHR22765:SF334RECEPTOR HOMOLOGY REGION, TRANSMEMBRANE DOMAIN- AND RING DOMAIN-CONTAINING PROTEIN 1coord: 462..523
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..60
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..41
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 61..542
NoneNo IPR availableCDDcd16454RING-H2_PA-TM-RINGcoord: 479..521
e-value: 1.89575E-19
score: 79.6533
NoneNo IPR availableSUPERFAMILY52025PA domaincoord: 238..279
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 473..527
NoneNo IPR availableTMHMMTMhelixcoord: 37..59
IPR003137PA domainPFAMPF02225PAcoord: 229..310
e-value: 4.3E-12
score: 45.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000203_piloncontigtig00000203_pilon:105921..107549 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra602.t1Ggra602.t1Gracilaria gracilis GNS1m malemRNAtig00000203_pilon 105921..107549 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra602.t1 ID=Ggra602.t1|Name=Ggra602.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=543bp
MHQLRSRARPTAESSAQRPTRSTPVVSACPHASSFPFPLARAMLLLLLIL
PVATAIIITAPEACGGSRVVKHSTAFFGPNADGSAIANCNVPLFPPRAQR
DGAYVRLMSRVGRKHVHTLRSAAKSLFVGMVFGRVPDAVLLSDAPPQIPL
LETAAISVRARTTSDAWKNDPQKPAPTVGPTESPVPSSHTRQVLQSAPSY
EFIASAPRERPHAQSSPSLDPSAFALFDACCQLSVSADLQAVKGAVAVVA
RGVCDFAQKVRHMQDAGALGVIVVNFKDEGDHLANMKLNQSKTNPEINIP
AVMIRYRDWARIAPCWNETNIIFTSEGEAQGDYGHDALNWAMMRGMALWI
LCQCGVNVVRYKRRVSEYRARADAIAALPVETYHRNGHAEAPSTQEEVTP
LLADTSEPETSPIQPTANKAETSPAPSSSVMDHHAERVNLLHSQPQAGPS
CPLAPASAPSSSSTVPHEAVESEEEEPICAVCLEEFESGQQVRLLACSHL
YHRSCIDPWLQSSSNSCPLCKREIPNLPPPPTQLHYGSMLIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR003137PA_domain