Ggra594.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra594.t1
Unique NameGgra594.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length407
Homology
The following BLAST results are available for this feature:
BLAST of Ggra594.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 256..275
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 307..311
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 343..406
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..192
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 276..281
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 312..342
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 282..306
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 193..213
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 214..255
NoneNo IPR availableTMHMMTMhelixcoord: 146..168
NoneNo IPR availableTMHMMTMhelixcoord: 283..305
NoneNo IPR availableTMHMMTMhelixcoord: 320..342
NoneNo IPR availableTMHMMTMhelixcoord: 193..215
NoneNo IPR availableTMHMMTMhelixcoord: 256..278

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000203_piloncontigtig00000203_pilon:36858..39358 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra594.t1Ggra594.t1Gracilaria gracilis GNS1m malemRNAtig00000203_pilon 36858..39358 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra594.t1 ID=Ggra594.t1|Name=Ggra594.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=407bp
MVYEHNTLPCGTHREDITSPEDIGCSTCVLLYHSSPDKTHAWNRRNGYWW
NRSEQICLVMLTTSGLKRNASRSVTREIDKPDWVAACIRREGRTASCLLR
TEELALAVPVCVTFVPFLKPSNDWQSAFKRTVDISAKKTLLLKNPIVTFA
VATNLVGAASHAMFLNLLCLRRVYGDGFTLPLTTPSRRSKRRVVAFSTGF
LAFVVATWVGYVIHAGNVSTRLAETVSELLGGLRRAMTAIDWKASTAFKV
TDAMRVSIAMSMALGVLLGAGVGLISGLEPAVVIGVSASMAMGCVFVMSF
AILHGVNALRAVAFALFVSVCLPFGFGFGFGAGILVGVFLGLEDADEIRE
KTLDFVNNFGDFVRVRCAPKFGSTGLKRLRDVVPRYACLPSMSETRLFTK
DKFSYV*
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