Ggra10753.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10753.t1
Unique NameGgra10753.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length362
Homology
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BLAST of Ggra10753.t1 vs. uniprot
Match: R7Q9D7 (EF-hand domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9D7_CHOCR)

HSP 1 Score: 129 bits (323), Expect = 4.790e-29
Identity = 86/249 (34.54%), Postives = 136/249 (54.62%), Query Frame = 0 
Query:  108 SMDDSDMPFSQE--LEPNAGEGSECSSDFAESSLENNDWHAELLHLRES-TCRSLQSSAAACQRLAFDDNESQLFHSFDDERYESAPWQVNEEEWQEC----ETHQNLEDRAIASRSGGLPNWIYDSPFDSIDVNIGDVDMWLGERYTTEANVILDNVLAELGARCSIRTRHTGTTENFDAETIISPLNLLKVFVPDSLLQKLSDVANRNLESRRKDTTNKKEILDLVVLHILCASYNESPTVVCDPLE 349
            S+D SD  FSQ   L   +   SE S DF++     +D   E+  LR S    S  +S        ++D  S++FH F+ ER+ + PW+    E + C     +  +L+ +  A R GGLP W Y+SPF  + V + DV+  L  R+  EA+ +L  V A++  R  +        ++     +++PL+ L+ FV D LL+KLS  ANR L   R+  T+K+E+L L+++H+LCA+Y+ESP+ +CD  E
Sbjct:  185 SVDTSDKAFSQNSCLSLFSHYTSEDSEDFSDGEKIISD--QEIRSLRHSQNMTSYCASGGESGAPLWEDLHSRIFHDFNGERFSAGPWEEVHVEEERCLRSAMSFDDLQAKKNAQRHGGLPMWHYESPFAEVTVRVDDVNDTLEHRFLEEAHDVLRKVKADIVGRGDLGD------DSAKERDVVTPLSCLQSFVSDCLLEKLSYGANRVLHQNRQKGTSKEELLGLIIIHVLCAAYDESPSTICDAGE 425
The following BLAST results are available for this feature:
BLAST of Ggra10753.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7Q9D74.790e-2934.54EF-hand domain-containing protein n=1 Tax=Chondrus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..137

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000200_piloncontigtig00000200_pilon:125108..126193 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10753.t1Ggra10753.t1Gracilaria gracilis GNS1m malemRNAtig00000200_pilon 125108..126193 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10753.t1 ID=Ggra10753.t1|Name=Ggra10753.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=362bp
MVSDPAAINCLPDNVQPVSHDNSDVLHNVSMSPIPQHSVHLGEQSGTGNA
SSSLQSVQRAHSLTALPDEVHSSQQESTSDVHAYDETEDQSNYTATGIDI
PKIVHDSSMDDSDMPFSQELEPNAGEGSECSSDFAESSLENNDWHAELLH
LRESTCRSLQSSAAACQRLAFDDNESQLFHSFDDERYESAPWQVNEEEWQ
ECETHQNLEDRAIASRSGGLPNWIYDSPFDSIDVNIGDVDMWLGERYTTE
ANVILDNVLAELGARCSIRTRHTGTTENFDAETIISPLNLLKVFVPDSLL
QKLSDVANRNLESRRKDTTNKKEILDLVVLHILCASYNESPTVVCDPLET
GNFLQIGITSV*
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