Ggra10755.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10755.t1
Unique NameGgra10755.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length194
Homology
BLAST of Ggra10755.t1 vs. uniprot
Match: A0A2V3IWV0 (ATP-dependent zinc metalloprotease FTSH 4, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWV0_9FLOR)

HSP 1 Score: 131 bits (330), Expect = 4.720e-33
Identity = 72/184 (39.13%), Postives = 110/184 (59.78%), Query Frame = 0
Query:    7 HLSQAFKILASSVPRNLPYYLVDGIYPKWPIFAGPIHQPGSVQESRYTKRQEGTRKDIERFFAVLQARFKVLRDDIRLWFLGEIVTMSQAFVFLHNMIIRMQQEGLFEEYFEEQDGQIDILTELLNSDIDYVQS--TDKGGSGHADTSCEDLSTHLTEWESFIVRHGFVTSGIGHAKLKEDLIQ 188
            +L   +++  ++  R L Y+LVDGI+P+W IFA PIH P SV E +Y K QE  RK IER F VLQARF+VLR +  LW+   +V +S+  V LHNM++RM QEG F E  + +   ++++TEL + +   +Q   T+K            +   L + E+  ++   +TS IG + L++DLI+
Sbjct:   99 NLPTDYRLHRNAQNRRLGYFLVDGIHPRWTIFARPIHSPASVDEGQYKKVQEALRKGIERAFDVLQARFQVLRRESFLWYKKNVVMVSKVCVVLHNMLVRMNQEGFFVEDSQAEGQGVNLITELHDEETFRLQERRTEKLREEQEAKEAIMVDGRL-DLEALCIKESVITSPIGFSALRKDLIR 281          
BLAST of Ggra10755.t1 vs. uniprot
Match: uncharacterized protein LOC109127033 n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI000900F194 (uncharacterized protein LOC109127033 n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI000900F194)

HSP 1 Score: 97.4 bits (241), Expect = 4.430e-22
Identity = 52/163 (31.90%), Postives = 85/163 (52.15%), Query Frame = 0
Query:   13 KILASSVPRNLPYYLVDGIYPKWPIFAGPIHQPGSVQESRYTKRQEGTRKDIERFFAVLQARFKVLRDDIRLWFLGEIVTMSQAFVFLHNMIIRMQQEGLFEEYFEEQDGQID-------ILTELLNSDIDYVQSTD--KGGSGHADTSCEDLSTHLTEWESF 166
            K   +  P N+ YYL DGIYP +P F   I  P S  +  +   QEG RKDIER F VLQARFK++R+  R+W + ++  + ++ + LHNM +  +++   + + +    +          LTE+L +  ++V++    +  S H +    DL  H+  W  F
Sbjct:   16 KFFVNQRPYNMAYYLADGIYPSYPTFVKSIRLPQSEPDKLFAHHQEGCRKDIERAFGVLQARFKIIREPARMWDINDLAIIMRSCIILHNMTVEDERDTYAQHWTDYDQSEASGSSTPQPFLTEVLPAFENHVRARSELRDSSEHHELQA-DLGKHI--WAKF 175          
BLAST of Ggra10755.t1 vs. uniprot
Match: uncharacterized protein LOC112082407 n=1 Tax=Eutrema salsugineum TaxID=72664 RepID=UPI000CED2B4C (uncharacterized protein LOC112082407 n=1 Tax=Eutrema salsugineum TaxID=72664 RepID=UPI000CED2B4C)

HSP 1 Score: 99.8 bits (247), Expect = 1.490e-21
Identity = 58/169 (34.32%), Postives = 85/169 (50.30%), Query Frame = 0
Query:   22 NLPYYLVDGIYPKWPIFAGPIHQPGSVQESRYTKRQEGTRKDIERFFAVLQARFKVLRDDIRLWFLGEIVTMSQAFVFLHNMIIRMQQEGLFEEYFEEQDGQIDILTELLNSDIDYVQSTDKGGSGHADTSCEDLSTHLTEWESFIVRHGFVTSGIGHAKLKEDLIQRL 190
            +L YYL DGIYPKW  F   I  P   + S +  RQEG RKD+ER F VLQARF ++R+    W   +I  + +A + LHNMI+            +E+DG           ++   Q  +  G+ H D S    +T++ +     VR   V     HA+LK+DL++ +
Sbjct:  195 HLAYYLTDGIYPKWATFVQSIKLPQGPKASCFANRQEGYRKDVERAFGVLQARFAIIRNPALSWDKAKIGKIMRACIILHNMIVE-----------DERDGY-----SYSQQNVSEFQQGEGSGNAHVDLSYSPANTNIAD---MFVRRTKVRDKKMHAQLKKDLVEHI 344          
BLAST of Ggra10755.t1 vs. uniprot
Match: uncharacterized protein LOC112422486 n=1 Tax=Medicago truncatula TaxID=3880 RepID=UPI001967A13A (uncharacterized protein LOC112422486 n=1 Tax=Medicago truncatula TaxID=3880 RepID=UPI001967A13A)

HSP 1 Score: 97.1 bits (240), Expect = 3.140e-21
Identity = 44/109 (40.37%), Postives = 67/109 (61.47%), Query Frame = 0
Query:   16 ASSVPRNLPYYLVDGIYPKWPIFAGPIHQPGSVQESRYTKRQEGTRKDIERFFAVLQARFKVLRDDIRLWFLGEIVTMSQAFVFLHNMIIRMQQEGLFEEY--FEEQDG 122
             +  P N+ YYL DGIYP +P F   I  P S  +  + K QE  RKDIER F VLQARFK++R+  RLW + ++  + ++ + LHNMI+  +++   + +  FE+ +G
Sbjct:  123 VNQRPYNMTYYLADGIYPSYPTFVKSIRLPQSEPDKLFAKHQESCRKDIERAFGVLQARFKIIREPARLWDIADLGIIMRSCIILHNMIVEDERDTYAQRWTDFEQSEG 231          
BLAST of Ggra10755.t1 vs. uniprot
Match: A0A0D3CE50 (Uncharacterized protein n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=A0A0D3CE50_BRAOL)

HSP 1 Score: 95.9 bits (237), Expect = 3.290e-21
Identity = 42/93 (45.16%), Postives = 59/93 (63.44%), Query Frame = 0
Query:   13 KILASSVPRNLPYYLVDGIYPKWPIFAGPIHQPGSVQESRYTKRQEGTRKDIERFFAVLQARFKVLRDDIRLWFLGEIVTMSQAFVFLHNMII 105
            K   +  P ++ YYL DGIYP +P F   I  P S     +TK QEG RKDIER F VLQARFK++R+  R+W + ++  + ++ + LHNMI+
Sbjct:   77 KFFVNQRPYDMAYYLADGIYPSYPTFVKSIRLPQSEPNKLFTKYQEGYRKDIERAFGVLQARFKIIREPARMWKISDLAIIVRSCIILHNMIV 169          
BLAST of Ggra10755.t1 vs. uniprot
Match: R7Q9R2 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9R2_CHOCR)

HSP 1 Score: 96.7 bits (239), Expect = 4.230e-21
Identity = 43/99 (43.43%), Postives = 61/99 (61.62%), Query Frame = 0
Query:   12 FKILASSVPRNLPYYLVDGIYPKWPIFAGPIHQPGSVQESRYTKRQEGTRKDIERFFAVLQARFKVLRDDIRLWFLGEIVTMSQAFVFLHNMIIRMQQE 110
            F    +   R +PYYL DGIYP W IFA  + +  + +E  Y + QEG RKDIER F VL ARF +L+   RLW+  +I  + +A + LHNMI+  +++
Sbjct:  101 FPFFVNGERRTMPYYLADGIYPSWAIFAKTMKEATTAKERAYARAQEGVRKDIERAFGVLMARFHILQRPCRLWYRRDISNVVKACIILHNMIVEGRRD 199          
BLAST of Ggra10755.t1 vs. uniprot
Match: uncharacterized protein LOC111202842 n=1 Tax=Brassica napus TaxID=3708 RepID=UPI000BBE8339 (uncharacterized protein LOC111202842 n=1 Tax=Brassica napus TaxID=3708 RepID=UPI000BBE8339)

HSP 1 Score: 96.7 bits (239), Expect = 4.310e-21
Identity = 41/104 (39.42%), Postives = 65/104 (62.50%), Query Frame = 0
Query:   13 KILASSVPRNLPYYLVDGIYPKWPIFAGPIHQPGSVQESRYTKRQEGTRKDIERFFAVLQARFKVLRDDIRLWFLGEIVTMSQAFVFLHNMIIRMQQEGLFEEY 116
            K   +  P ++ YYL DGIYP +P F   I  P S  +  + K QEG RKDIER F VLQARFK++R+  R+W + ++  + ++ + LHNMI+  +++   +++
Sbjct:   88 KFFLNQRPYDMAYYLADGIYPSYPTFVKSIRLPQSEPDKLFAKYQEGCRKDIERAFGVLQARFKIIREPARMWDIADLAIIMRSCILLHNMIVEDERDTYAQQW 191          
BLAST of Ggra10755.t1 vs. uniprot
Match: uncharacterized protein LOC117131682 n=1 Tax=Brassica campestris TaxID=3711 RepID=UPI00142D6949 (uncharacterized protein LOC117131682 n=1 Tax=Brassica campestris TaxID=3711 RepID=UPI00142D6949)

HSP 1 Score: 95.9 bits (237), Expect = 4.690e-21
Identity = 53/147 (36.05%), Postives = 77/147 (52.38%), Query Frame = 0
Query:   16 ASSVPRNLPYYLVDGIYPKWPIFAGPIHQPGSVQESRYTKRQEGTRKDIERFFAVLQARFKVLRDDIRLWFLGEIVTMSQAFVFLHNMIIRMQQEGLFEEYFEEQDGQIDILTELLNSDIDYVQSTDKGGSGHADTSCEDLSTHLTE 162
             +  P +L YYL DGIYP W  F   I  P S + S + K QE  RKD+ER F VLQARF V+R+   LW  G+I  + +A + LHNMI+  ++    +   +E   + D+ T  +N   +   S D+  S     + ++L   L E
Sbjct:   75 VNGNPYHLAYYLTDGIYPNWATFIQSIRLPQSDKHSLFAKNQEAVRKDVERAFGVLQARFAVVRNPSNLWDKGKIGNIMRACIILHNMIVEDERSSATQYAVDELQERGDVDTFSVNMASNLGNSIDRRTSVRNRQAHQNLKNDLIE 221          
BLAST of Ggra10755.t1 vs. uniprot
Match: A0A0D3A6V4 (Uncharacterized protein n=7 Tax=Brassica TaxID=3705 RepID=A0A0D3A6V4_BRAOL)

HSP 1 Score: 99.4 bits (246), Expect = 4.810e-21
Identity = 55/167 (32.93%), Postives = 91/167 (54.49%), Query Frame = 0
Query:   13 KILASSVPRNLPYYLVDGIYPKWPIFAGPIHQPGSVQESRYTKRQEGTRKDIERFFAVLQARFKVLRDDIRLWFLGEIVTMSQAFVFLHNMIIRMQQEG---LFEEYFEEQ----DGQIDILTELLNSDIDYVQSTDKGGSGHADTSCE-DLSTHLTEWESFIVRHG 171
                +  P N+ YYL DGIYP +P F   I  P S Q+  + + QEG RKDIER F VLQARFK++R+  RLW + ++  + ++ + LHNMI+  +++    L+ +Y + +    +      TE+L S  ++V++  +    +     + DL  H+  W+ F +  G
Sbjct:  276 NFFVNQRPYNMAYYLADGIYPSYPTFVKSIRLPQSEQDKLFAQVQEGCRKDIERAFGVLQARFKIIREPARLWEISDLAIIMRSCIILHNMIVEDERDTYAQLWTDYDQSEASGSNAPQPFSTEVLPSFANHVRARSELRDSNVHHELQADLVKHI--WQKFSMFRG 440          
BLAST of Ggra10755.t1 vs. uniprot
Match: uncharacterized protein LOC123890218 n=2 Tax=Trifolium pratense TaxID=57577 RepID=UPI001E69308F (uncharacterized protein LOC123890218 n=2 Tax=Trifolium pratense TaxID=57577 RepID=UPI001E69308F)

HSP 1 Score: 99.4 bits (246), Expect = 4.900e-21
Identity = 56/181 (30.94%), Postives = 88/181 (48.62%), Query Frame = 0
Query:   13 KILASSVPRNLPYYLVDGIYPKWPIFAGPIHQPGSVQESRYTKRQEGTRKDIERFFAVLQARFKVLRDDIRLWFLGEIVTMSQAFVFLHNMIIRMQQEGLFEEYFEEQDGQIDILTELLNSDIDYVQSTDKGGSGHADTSCEDL---STHLTEWESFIVRHGFVTSGIGHAKLKEDLIQRL 190
                +  P ++ YYL DGIYP +P F   I  P S  +  + K QEG RKDIER F VLQARFK++R+  RLW + ++  + ++++ LHNMI+  +++   + +                   D+ QS + G S     S E L   + H+     F           GH +L+ DL++ +
Sbjct:  279 NFFVNQHPYDMTYYLADGIYPSYPTFVKSIRLPQSEPDKLFAKYQEGYRKDIERAFGVLQARFKIIREPARLWDIADLGIIMRSYIILHNMIVEDERDSYAQRW------------------TDFEQSEESGSSAPQPYSTEVLPAFANHVRARSEF-------RDPKGHQELQADLVKHI 434          
The following BLAST results are available for this feature:
BLAST of Ggra10755.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IWV04.720e-3339.13ATP-dependent zinc metalloprotease FTSH 4, mitocho... [more]
uncharacterized protein LOC109127033 n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI000900F1944.430e-2231.90uncharacterized protein LOC109127033 n=1 Tax=Camel... [more]
uncharacterized protein LOC112082407 n=1 Tax=Eutrema salsugineum TaxID=72664 RepID=UPI000CED2B4C1.490e-2134.32uncharacterized protein LOC112082407 n=1 Tax=Eutre... [more]
uncharacterized protein LOC112422486 n=1 Tax=Medicago truncatula TaxID=3880 RepID=UPI001967A13A3.140e-2140.37uncharacterized protein LOC112422486 n=1 Tax=Medic... [more]
A0A0D3CE503.290e-2145.16Uncharacterized protein n=1 Tax=Brassica oleracea ... [more]
R7Q9R24.230e-2143.43Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
uncharacterized protein LOC111202842 n=1 Tax=Brassica napus TaxID=3708 RepID=UPI000BBE83394.310e-2139.42uncharacterized protein LOC111202842 n=1 Tax=Brass... [more]
uncharacterized protein LOC117131682 n=1 Tax=Brassica campestris TaxID=3711 RepID=UPI00142D69494.690e-2136.05uncharacterized protein LOC117131682 n=1 Tax=Brass... [more]
A0A0D3A6V44.810e-2132.93Uncharacterized protein n=7 Tax=Brassica TaxID=370... [more]
uncharacterized protein LOC123890218 n=2 Tax=Trifolium pratense TaxID=57577 RepID=UPI001E69308F4.900e-2130.94uncharacterized protein LOC123890218 n=2 Tax=Trifo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006912Harbinger transposase-derived proteinPFAMPF04827Plant_trancoord: 19..108
e-value: 1.2E-24
score: 87.1
IPR045249Putative nuclease HARBI1-likePANTHERPTHR22930UNCHARACTERIZEDcoord: 20..115
NoneNo IPR availablePANTHERPTHR22930:SF181OS06G0597250 PROTEINcoord: 20..115
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 82..100
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 101..193
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000200_piloncontigtig00000200_pilon:132187..132768 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10755.t1Ggra10755.t1Gracilaria gracilis GNS1m malemRNAtig00000200_pilon 132187..132768 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10755.t1 ID=Ggra10755.t1|Name=Ggra10755.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=194bp
MDNFPFHLSQAFKILASSVPRNLPYYLVDGIYPKWPIFAGPIHQPGSVQE
SRYTKRQEGTRKDIERFFAVLQARFKVLRDDIRLWFLGEIVTMSQAFVFL
HNMIIRMQQEGLFEEYFEEQDGQIDILTELLNSDIDYVQSTDKGGSGHAD
TSCEDLSTHLTEWESFIVRHGFVTSGIGHAKLKEDLIQRLGNC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006912Harbinger_derived_prot
IPR045249HARBI1-like