Ggra10240.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10240.t1
Unique NameGgra10240.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length119
Homology
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BLAST of Ggra10240.t1 vs. uniprot
Match: A0A2V3IFZ2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFZ2_9FLOR)

HSP 1 Score: 137 bits (346), Expect = 7.340e-40
Identity = 79/118 (66.95%), Postives = 92/118 (77.97%), Query Frame = 0 
Query:    1 MAAPALTATATSLTVFALGSVANVAASNKPLASRTWLPRGGFIGVINGNGSAPVAVAESSXXXXXXXXXXXXXGRRRNVPIGGKTDKPAPPCPFGRFPKHKPTKLPGPPKSYVPSNSP 118
            MAAPA+ A A+SLTV  LG+ AN+ ASNKPL  ++WLP GGF+GV+NGNG +  AVAE S XXXXXXX      +    PIGG+TDKPAPPCPFGRFPKHKP+KLPGPPK Y P+NSP
Sbjct:    1 MAAPAINAAASSLTVVTLGAAANLLASNKPLQLKSWLPSGGFVGVVNGNGRSSTAVAEPSTXXXXXXXAPKGTVK----PIGGRTDKPAPPCPFGRFPKHKPSKLPGPPKPYNPANSP 114
The following BLAST results are available for this feature:
BLAST of Ggra10240.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IFZ27.340e-4066.95Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..118
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..118
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..118
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..26
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:187100..187456 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10240.t1Ggra10240.t1Gracilaria gracilis GNS1m malemRNAtig00000016_pilon 187100..187456 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10240.t1 ID=Ggra10240.t1|Name=Ggra10240.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=119bp
MAAPALTATATSLTVFALGSVANVAASNKPLASRTWLPRGGFIGVINGNG
SAPVAVAESSTPAAPSSAATPASGRRRNVPIGGKTDKPAPPCPFGRFPKH
KPTKLPGPPKSYVPSNSP*
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