Ggra10750.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10750.t1
Unique NameGgra10750.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length305
Homology
BLAST of Ggra10750.t1 vs. uniprot
Match: A0A2V3ITD1 (Probable ATP-dependent transporter ycf16 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITD1_9FLOR)

HSP 1 Score: 370 bits (949), Expect = 4.030e-120
Identity = 200/253 (79.05%), Postives = 224/253 (88.54%), Query Frame = 0
Query:   54 TAAAEDEVVKVVSIFLPHLNPDISSSKSQEVARDILRQLHGAPTEDQTREKLVRLTKATRLGASVGIDAGRRKGTRARQRVGNANQTLDRSAEAERAKEASAARRARRVGAQVKTYQSEATVSSTKAKYTPSSSDVHIEGLDLSFGRMTLLDGAELHIPYGRRVGIIGRNGCGNTTLMRAIVRRELPIPEDMDIVYVELEIAGSEKTPLEVVLESEFERQELLAEKEELND--EKLKEAGDELDPSVAARLTE 304
            +AAAEDEVV +VSIFLP +NP+I+ SKS+E+AR+I RQLHGAPTED TREKLVRL+KATRLGASVGID+GRRK    RQ  GNANQTLDRSAEAERAKEA+A RRARRVGAQVKTYQSEATVSS KAKYTP SSD+HIEGLDL+FG M+LL+GAELHIPYGRRVG++GRNGCG TTLMRAI RRELPIPEDMD VYVE EIAGSEKTPLEVVLES+ ERQELL E+EELN+  E+ + AG E +P+V ARL E
Sbjct:   43 SAAAEDEVVDIVSIFLPQINPEIALSKSEEIARNIRRQLHGAPTEDTTREKLVRLSKATRLGASVGIDSGRRKSVGTRQHAGNANQTLDRSAEAERAKEAAAVRRARRVGAQVKTYQSEATVSSVKAKYTPGSSDIHIEGLDLAFGGMSLLEGAELHIPYGRRVGVVGRNGCGKTTLMRAIARRELPIPEDMDSVYVEQEIAGSEKTPLEVVLESDVERQELLTEEEELNEKMEEAEAAGKEPEPAVTARLAE 295          
BLAST of Ggra10750.t1 vs. uniprot
Match: R7QJE7 (Probable ATP-dependent transporter ycf16 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJE7_CHOCR)

HSP 1 Score: 246 bits (629), Expect = 2.360e-73
Identity = 140/221 (63.35%), Postives = 169/221 (76.47%), Query Frame = 0
Query:   88 ILRQLHGAPTEDQTREKLVRLTKATRLGASVGIDAGRRK--GTRARQRVGNANQTLDRSAEAERAKEASAARRARRVGAQVKTYQSEATVSSTKAKYTPSSSDVHIEGLDLSFGRMTLLDGAELHIPYGRRVGIIGRNGCGNTTLMRAIVRRELPIPEDMDIVYVELEIAGSEKTPLEVVLESEFERQELLAEKEELNDEKL--KEAGDELDPSVAARLTE 304
            +LR LHG PT D  R+   RL KATRLGA+V  +  RR+   T   Q  GNAN+TLDRS EAE+AK  +A R+ARRVGAQV+TYQSEATV S K+KYT  S+D+HI GLDL+FG M+LL+GA L+IPYGRRVGI+GRNGCG TTLMRAI RRELP+P++MDIVYVE EI GS+KTPL+VVLES+ ERQ+LL E+E L +E    +  G E DP +  RL E
Sbjct:    1 MLRTLHGEPTVDPGRDMPTRLKKATRLGAAVDRNVRRRRPIATGELQGGGNANRTLDRSKEAEKAKNLAAVRKARRVGAQVRTYQSEATVGSVKSKYTTGSTDIHINGLDLAFGGMSLLEGASLNIPYGRRVGIVGRNGCGKTTLMRAIARRELPVPDEMDIVYVEQEIEGSDKTPLQVVLESDTERQDLLDEEEALTEEMTLAESEGREQDPKIGERLAE 221          
BLAST of Ggra10750.t1 vs. uniprot
Match: A0A1X6PA38 (Probable ATP-dependent transporter ycf16 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PA38_PORUM)

HSP 1 Score: 184 bits (467), Expect = 1.490e-49
Identity = 121/251 (48.21%), Postives = 161/251 (64.14%), Query Frame = 0
Query:   76 ISSSKSQEVARDILRQLHGAP---TEDQTREKLVRLTKATRLGASVG---IDAGRRKGTR-----------ARQRVGNANQTLDRSAEAERAKEASAARRARRVGAQVKTYQ---SEATVSSTKAKYTPSSSDVHIEGLDLSFGRMTLLDGAELHIPYGRRVGIIGRNGCGNTTLMRAIVRRELPIPEDMDIVYVELEIAGSEKTPLEVVLESEFERQELLAEKEELND--EKLKEAGDELDPSVAARLTE 304
            ++ + + +VAR + R+LHG P   TE     +  RL K  RLGA+VG   +D G    +R           A    GNAN TLDRS EA +AK+A+  RR+RR GA +++Y    SEA V STKAK    + DVHIEG+DLSFG +TLL GA LH+  GRR G+IGRNG G +TLMRA+ RRELP+P DMD++YVE E+AG+++TPLE VL ++ +R  LLAE+ +L    + L  AG+E    V A L+E
Sbjct:    9 VTGAAAFDVARGLRRELHGVPAPLTEGGAAGQPQRLAKPKRLGAAVGFRGVDDGAEGKSRRXXXXXAAVNPAVDGGGNANATLDRSLEAAKAKDAADVRRSRRTGASLRSYTHAPSEAAVGSTKAKIAEGTRDVHIEGIDLSFGGLTLLSGASLHLAAGRRYGVIGRNGIGKSTLMRALARRELPLPPDMDVLYVEQEVAGNDQTPLECVLSADEKRTALLAEEAQLTASLDTLNAAGEERLNLVYAALSE 259          
BLAST of Ggra10750.t1 vs. uniprot
Match: A0A5J4YTW5 (Probable ATP-dependent transporter ycf16 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YTW5_PORPP)

HSP 1 Score: 161 bits (407), Expect = 5.790e-41
Identity = 114/271 (42.07%), Postives = 153/271 (56.46%), Query Frame = 0
Query:   58 EDEVVKVVSIFLPHLNPDISSSKSQEVARDILRQLH---------GAPTEDQTREKLVRLTKATRLGASVGIDAGRRKGTRA----------------RQRV--GNANQTLDRSAEAERAKEASAARRARRVGAQVKTYQSE-ATVSSTKAKYTPSSSDVHIEGLDLSFGRMTLLDGAELHIPYGRRVGIIGRNGCGNTTLMRAIVRRELPIPEDMDIVYVELEIAGSEKTPLEVVLESEFERQELLAEKEELNDEKLKEAGDELDPSVAA 300
            E E+V     FL  + P +S   ++++A D+ R  H         GA   D  +  L RL    R+G S+G  AGRR G  A                R+ V  GNAN TLDRS EA  A+E +  R+ARR G   K      ATVS+ ++K    + DV  EG+D+SFG +TLL+GA L   YGRR GI+GRNG G +TLM+AI RRELP+PEDMD+++VE E+ G   TPLE VL+++ +R  LL E+ EL +    +A DE   S A+
Sbjct:   44 EHEIVDTAWQFLQQIQPGLSEEAARQMALDVRRSFHPVAEDAAGPGAGGGDDFQ--LHRLAAPKRMGGSLGA-AGRRLGLDAEADGDSAGGSKSAASKRKEVAQGNANATLDRSLEAAEAREMAKFRKARRTGKDTKRIMENLATVSAVRSKVAAGAVDVRAEGVDISFGGLTLLEGASLSFAYGRRYGIVGRNGIGKSTLMKAIARRELPLPEDMDVLFVEQEVVGDATTPLECVLDADEQRARLLDEEAELTEALGDQATDEAPTSGAS 311          
BLAST of Ggra10750.t1 vs. uniprot
Match: A0A7S0ZJ44 (Probable ATP-dependent transporter ycf16 n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZJ44_9RHOD)

HSP 1 Score: 160 bits (405), Expect = 9.810e-41
Identity = 104/263 (39.54%), Postives = 152/263 (57.79%), Query Frame = 0
Query:   58 EDEVVKVVSIFLPHLNPDISSSKSQEVARDILRQLHGAPTEDQTREKL----------VRLTKATRLGASVGIDA--------GRRKGTRARQRVGNANQTLDRSAEAERAKEASAARRARRVGAQVKT-YQSEATVSSTKAKYTPSSSDVHIEGLDLSFGRMTLLDGAELHIPYGRRVGIIGRNGCGNTTLMRAIVRRELPIPEDMDIVYVELEIAGSEKTPLEVVLESEFERQELLAEKEELNDEKLKEAGDELDPSVAAR 301
            E E++++ + F+PH++P I    +  + RDI R      +ED + E             RL + +RLGA+V + A          R      Q  GNAN TLDRS EA  +KE S  RR RR G   +   +S A+VS+        S DV +EG+D+SFG +TLL+GA + + +GRR G+ GRNG G +TL++AI RRELP+PEDMD+++VE E+AG +++ L+ VL++  ER+ELL    EL  +  +E  D  + S A R
Sbjct:   47 EHELIEIAAAFIPHIDPSIDYEDAVRIVRDI-RSNFVTLSEDGSGESANDVSGGNAAPARLKQPSRLGAAVSLQARGLTDPTKNNRSSKVVLQAGGNANATLDRSNEAATSKEMSRLRRMRRAGKDTRAAMESLASVSARNGNPLAGSVDVRMEGVDISFGGLTLLEGAAIKLAHGRRYGVTGRNGIGKSTLLKAIARRELPLPEDMDVLFVEQEVAGDDRSALQCVLDAHVERKELLETLAELEKDAAEETTDNAEESTARR 308          
BLAST of Ggra10750.t1 vs. uniprot
Match: A0A7S3EQX5 (Probable ATP-dependent transporter ycf16 n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EQX5_9RHOD)

HSP 1 Score: 156 bits (394), Expect = 2.700e-39
Identity = 100/263 (38.02%), Postives = 163/263 (61.98%), Query Frame = 0
Query:   52 LHTAAAEDEVVKVVSIFLPHLNPDISSSKSQEVARDILRQLHGAPTE-DQTREKLVRLTKATRLGASVGIDAGRRKGTRARQRVGNANQT------LDRSAEAERAKEASAARRARRVGAQVKT--YQSEATVSSTKAKYTPSSSDVHIEGLDLSFGRMTLLDGAELHIPYGRRVGIIGRNGCGNTTLMRAIVRRELPIPEDMDIVYVELEIAGSEKTPLEVVLESEFERQELLAEKEELNDEKLKEAGD-ELDPSVAARLTE 304
            ++T+  +DE++++++ F   ++   S  +S  +AR + ++L G   E D       RL   TR+G+   +         AR+  G +N T      LDRS EA + K+A+  R+A+R GA +K   Y+S  +V++ + K    + DV +EG+DLSFG ++LL+ A L + YGR+ G++GRNG G +TL++A+ RRELP+ + +D++YVE EIAG E++ L++VL S+ ER+ELL E++E+    + EAG  +L P  AARL E
Sbjct:   41 MNTSTGKDEIIELLAPFFTEIDAARSLEESTALARSVRKELFGEEEENDAAYLNPKRLAAPTRMGSGYSV---------ARRGKGQSNTTRDWKSSLDRSREAAKRKDAAMLRKAQRTGAALKRPLYESTPSVAALETKIQVGTKDVRVEGIDLSFGGISLLESATLQLSYGRKYGVVGRNGIGKSTLLKALARRELPVSDSLDLLYVEQEIAGDERSALQIVLASDTEREELLEEEKEIL--AVDEAGSSDLKPEAAARLEE 292          
BLAST of Ggra10750.t1 vs. uniprot
Match: A0A7S1T603 (Probable ATP-dependent transporter ycf16 n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T603_9RHOD)

HSP 1 Score: 151 bits (381), Expect = 1.680e-37
Identity = 87/188 (46.28%), Postives = 123/188 (65.43%), Query Frame = 0
Query:   99 DQTREKLVRLTKATRLGASVGIDAGRRKGTRARQRVGNANQTLDRSAEAERAKEASAARRARRVGAQVKTY----QSEATVSSTKAKYTPSSSDVHIEGLDLSFGRMTLLDGAELHIPYGRRVGIIGRNGCGNTTLMRAIVRRELPIPEDMDIVYVELEIAGSEKTPLEVVLESEFERQELLAEKEEL 282
            +  RE  VRL    R+G  +G       G +++   GNAN TLDRS EA  AK  +  R+ARR G Q+K +    +  A  S++K      + DV IEG+DLSFG + LL+GA +++ YGRR G+IGRNG G T+L++A+ RRELP+PEDMD++YVE E+   E+TPL++VL+S+ ER+ LL E+  L
Sbjct:   96 EDARENPVRLHAPRRMG--IGATKLLPSGAKSKGDGGNANATLDRSREAAVAKSIAQVRKARRTGKQIKDHILVEEKPAVSSTSKVHVAAGTRDVRIEGIDLSFGGLQLLEGANINLAYGRRYGVIGRNGIGKTSLLKAVARRELPLPEDMDVLYVEQEVTADERTPLQIVLDSDSERKNLLEEEHAL 281          
BLAST of Ggra10750.t1 vs. uniprot
Match: M2Y5M4 (Probable ATP-dependent transporter ycf16 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y5M4_GALSU)

HSP 1 Score: 134 bits (336), Expect = 1.950e-31
Identity = 92/234 (39.32%), Postives = 134/234 (57.26%), Query Frame = 0
Query:   60 EVVKVVSIFLPHLNPDISSSKSQEVARDILRQLHG--APTEDQTREKLVRLTKATRLGASVGIDAGRRKGTRARQRVG----------NANQTLDRSAEAERAKEASAARRARRVGAQVKTYQSE----ATVS-STKAKYTPSS-SDVHIEGLDLSFGRMTLLDGAELHIPYGRRVGIIGRNGCGNTTLMRAIVRRELPIPEDMDIVYVELEIAGSEKTPLEVVLESEFERQEL 275
            E++++++   P +  +  ++  +E   ++   LH      +++  E L RL++  RL    G     +   R    VG          NAN+TLDRS EA  A++ +  R+A+R G   K YQS     ATVS S+  K T     D+ I+GLDLSFG + LL    L + YGRR GI+GRNG G +TLM+AI  R+LPIP DM ++YVE E+ G E+TPL+ VLES+ ER++L
Sbjct:   35 ELIELINALTP-IFTEFGANSPKEQITELYTDLHPDLLEADEEEEETLARLSRPVRLADKFGERQADQNSKRLENLVGVTQTKGSMGGNANETLDRSKEAALARDMARERKAKRSG---KPYQSSFAESATVSLSSSTKQTQEGVRDIKIDGLDLSFGGLELLSNVNLILTYGRRYGIVGRNGVGKSTLMKAIAHRDLPIPSDMSVLYVEQEVVGDERTPLQYVLESDEERRQL 264          
BLAST of Ggra10750.t1 vs. uniprot
Match: A0A7S3AAV1 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3AAV1_9RHOD)

HSP 1 Score: 123 bits (309), Expect = 9.990e-30
Identity = 74/209 (35.41%), Postives = 126/209 (60.29%), Query Frame = 0
Query:   52 LHTAAAEDEVVKVVSIFLPHLNPDISSSKSQEVARDILRQLHGAPTE-DQTREKLVRLTKATRLGASVGIDAGRRKGTRARQRVGNANQT------LDRSAEAERAKEASAARRARRVGAQVKT--YQSEATVSSTKAKYTPSSSDVHIEGLDLSFGRMTLLDGAELHIPYGRRVGIIGRNGCGNTTLMRAIVRRELPIPEDMDIVYVE 251
            ++T+  +DE++++++ F   ++   S  +S  +AR + ++L G   E D       RL   TR+G+   +         AR+  G +N T      LDRS EA + K+A+  R+A+R GA +K   Y+S  +V++ + K    + DV +EG+DLSFG ++LL+ A L + YGR+ G++GRNG G +TL++A+ RRELP+ + +D++YVE
Sbjct:   41 MNTSTGKDEIIELLAPFFTEIDAARSLEESTALARSVRKELFGEEEENDAAYLNPKRLAAPTRMGSGYSV---------ARRGKGQSNTTRDWKSSLDRSREAAKRKDAAMLRKAQRTGAALKRPLYESTPSVAALETKIQVGTKDVRVEGIDLSFGGISLLESATLQLSYGRKYGVVGRNGIGKSTLLKALARRELPVSDSLDLLYVE 240          
BLAST of Ggra10750.t1 vs. uniprot
Match: M7WTX9 (ATP-binding cassette, sub-family F, member 3 n=5 Tax=Rhodosporidium toruloides TaxID=5286 RepID=M7WTX9_RHOT1)

HSP 1 Score: 105 bits (263), Expect = 9.270e-22
Identity = 54/111 (48.65%), Postives = 78/111 (70.27%), Query Frame = 0
Query:  175 VSSTKAKYTPSSSDVHIEGLDLSFGRMTLLDGAELHIPYGRRVGIIGRNGCGNTTLMRAIVRRELPIPEDMDIVYVELEIAGSEKTPLEVVLESEFERQELLAEKEELNDE 285
            V S K K    S D+HIEG+DL+FG   +L GA L +PYGRR G+IGRNG G +TL+RA+  RE+ IP+ + I+YV+ E+ G +   LE VL+++  R  L+AE++ELN++
Sbjct:  178 VGSGKGK----SKDIHIEGIDLNFGSNRILSGATLTLPYGRRAGLIGRNGIGKSTLLRAMALREVAIPQHISILYVQQEVVGDDTPALESVLQADVHRTRLMAEEKELNEQ 284          
The following BLAST results are available for this feature:
BLAST of Ggra10750.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ITD14.030e-12079.05Probable ATP-dependent transporter ycf16 n=1 Tax=G... [more]
R7QJE72.360e-7363.35Probable ATP-dependent transporter ycf16 n=1 Tax=C... [more]
A0A1X6PA381.490e-4948.21Probable ATP-dependent transporter ycf16 n=1 Tax=P... [more]
A0A5J4YTW55.790e-4142.07Probable ATP-dependent transporter ycf16 n=1 Tax=P... [more]
A0A7S0ZJ449.810e-4139.54Probable ATP-dependent transporter ycf16 n=1 Tax=T... [more]
A0A7S3EQX52.700e-3938.02Probable ATP-dependent transporter ycf16 n=2 Tax=R... [more]
A0A7S1T6031.680e-3746.28Probable ATP-dependent transporter ycf16 n=1 Tax=C... [more]
M2Y5M41.950e-3139.32Probable ATP-dependent transporter ycf16 n=1 Tax=G... [more]
A0A7S3AAV19.990e-3035.41Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M7WTX99.270e-2248.65ATP-binding cassette, sub-family F, member 3 n=5 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 265..292
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 281..304
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 281..295
NoneNo IPR availablePANTHERPTHR19211:SF45ATP-BINDING CASSETTE SUB-FAMILY F MEMBER 3coord: 56..289
NoneNo IPR availablePANTHERPTHR19211ATP-BINDING TRANSPORT PROTEIN-RELATEDcoord: 56..289
IPR003439ABC transporter-like, ATP-binding domainPFAMPF00005ABC_trancoord: 204..247
e-value: 5.4E-7
score: 30.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 148..294
e-value: 6.1E-13
score: 50.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 176..241

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000200_piloncontigtig00000200_pilon:100019..101088 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10750.t1Ggra10750.t1Gracilaria gracilis GNS1m malemRNAtig00000200_pilon 100019..101088 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10750.t1 ID=Ggra10750.t1|Name=Ggra10750.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=305bp
MFTYPGISAIYQGQTLRLSRNGATSSLDRCIIKIKIRCQTGVVTPTTTVL
ELHTAAAEDEVVKVVSIFLPHLNPDISSSKSQEVARDILRQLHGAPTEDQ
TREKLVRLTKATRLGASVGIDAGRRKGTRARQRVGNANQTLDRSAEAERA
KEASAARRARRVGAQVKTYQSEATVSSTKAKYTPSSSDVHIEGLDLSFGR
MTLLDGAELHIPYGRRVGIIGRNGCGNTTLMRAIVRRELPIPEDMDIVYV
ELEIAGSEKTPLEVVLESEFERQELLAEKEELNDEKLKEAGDELDPSVAA
RLTE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003439ABC_transporter-like_ATP-bd
IPR027417P-loop_NTPase