Ggra10805.t2 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10805.t2
Unique NameGgra10805.t2
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length299
Homology
[Close]
BLAST of Ggra10805.t2 vs. uniprot
Match: A0A2V3IMG5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMG5_9FLOR)

HSP 1 Score: 155 bits (391), Expect = 5.310e-43
Identity = 72/164 (43.90%), Postives = 109/164 (66.46%), Query Frame = 0 
Query:  135 LVGKSFRWMDDCYRPGVGNSVTVYAKMTVVKIGDLYRFFNCPETYLIRYRTPELTPMIIKYPPLTYDWSSQESGSWSTAQNDKWCNQNQKRARVEMFPVEETRANFTKALKRIMPYMREIRDFGCETDEDGFWTEVQGRAYENVDVQQVMTYLETIAFQYSLCI 298
            L+G++F  +DDCYRP   + V+VY KM ++ + +      CPE YL+ YR P++TPMIIK+P L +  +   SGS      ++WC + Q++ +  +FPV ET+  FT A+K ++P ++ IRDFGC   ++GF  +VQGRAY+NVDV  +M YL  +AF+Y LC+
Sbjct:   34 LIGQTFAKLDDCYRPRSSDYVSVYKKMFILTLNE-NPSPACPERYLVVYRNPKVTPMIIKHPYLEFPLNGGASGS----DVEEWCKKEQQKKKTVLFPVTETKKEFTAAVKAMLPRLKAIRDFGCTATKEGFIIQVQGRAYDNVDVADIMAYLHAVAFKYELCL 192
The following BLAST results are available for this feature:
BLAST of Ggra10805.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IMG55.310e-4343.90Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000198_piloncontigtig00000198_pilon:71356..72615 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10805.t2Ggra10805.t2Gracilaria gracilis GNS1m malemRNAtig00000198_pilon 71356..72615 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10805.t2 ID=Ggra10805.t2|Name=Ggra10805.t2|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=299bp
MTVLRINEGIRFFNCPETYLIRYRTPNVTPMIIRWPTLETPSFIHSSADS
HKWCLRNQRKNRVEMFPVHSTRANFTNAVKEISPLLKEIRDFGCELDENG
LWTRIEGRAFVNADVQAVITYLDTVAFSYSLCTHLVGKSFRWMDDCYRPG
VGNSVTVYAKMTVVKIGDLYRFFNCPETYLIRYRTPELTPMIIKYPPLTY
DWSSQESGSWSTAQNDKWCNQNQKRARVEMFPVEETRANFTKALKRIMPY
MREIRDFGCETDEDGFWTEVQGRAYENVDVQQVMTYLETIAFQYSLCI*
back to top