Ggra10819.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10819.t1
Unique NameGgra10819.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length195
Homology
BLAST of Ggra10819.t1 vs. uniprot
Match: A0A2V3ILN1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILN1_9FLOR)

HSP 1 Score: 225 bits (574), Expect = 1.210e-69
Identity = 120/193 (62.18%), Postives = 137/193 (70.98%), Query Frame = 0
Query:    2 FSPDRRTLVVTNLFAGLNAIAAGGVREIVTYSVNATGLLSVVPVANTASTELGNSEGRNLTGAIGLEVVEERGVQYVVVPEVRSLAGADCMAPTDQAASVYTWALDSESMLSPVQLDVPVVPSVSSGQIDSCWIMFSNDLSHFWVARTPTNATSLFSFDGGISTLEEEVEGSVTFSVDLWLSIDSKFLYQLQA 194
            FSPDRR+LVV++LF G NA+  G V EIV +SV+  G LS  PV+   STEL N+EGRNL G IG E+V  R VQYVVVPE R LAGAD M+P DQ ASV TW LDS   L PVQLDVP   SV+SGQ+DSC I FS DL HFWV  TP+N+ S FSF+  IS+LEE V  + TF VDLW S D KFLY L A
Sbjct:  152 FSPDRRSLVVSDLFFGFNALRTGTVNEIVVFSVDKFGHLSTAPVSTATSTELNNAEGRNLPGEIGFEIVRSRDVQYVVVPEARGLAGADGMSPADQVASVSTWRLDSRGRLFPVQLDVPTGSSVTSGQVDSCRIEFSADLRHFWVTNTPSNSISAFSFNRKISSLEE-VAATGTFPVDLWRSRDGKFLYPLFA 343          
BLAST of Ggra10819.t1 vs. uniprot
Match: A0A162XSV2 (Uncharacterized protein n=2 Tax=Aquimarina TaxID=290174 RepID=A0A162XSV2_9FLAO)

HSP 1 Score: 115 bits (289), Expect = 5.510e-27
Identity = 79/213 (37.09%), Postives = 110/213 (51.64%), Query Frame = 0
Query:    2 FSPDRRTLVVTNLFAGLNAIAAGGVREIVTYSVNATGLLSVVPVANTASTELGNSEGRNLTGAIGLEVVEERGVQYVVVPEVRSLA--GADCMAPTDQAASVYTWALDSESMLSPVQLDVPVVPSVSSGQIDS----CWIMFSNDLSHFWVARTPTNATSLFSFDGGISTLEEEV-----------EGSVTFS-----VDLWLSIDSKFLYQL 192
            FSPD   LVV ++ +G  A+A+G   EIV Y+VN  G LS   VA   ST  GN+EGRNL  AIG ++V   G  YVVV E R     G     P  Q  SV TW +  +  LSP+ LDV       SG+ ++    CW+ F++D + F+V+       + +SFD G+  L ++             G   F+     +D+W+S D +FLYQL
Sbjct:  219 FSPDGNWLVVASINSGAAALASGSEDEIVVYAVNGDGTLSANQVAAATSTLRGNTEGRNLPSAIGFQIV---GNNYVVVTEAREFQPDGTPPAFPALQDGSVSTWQIQGDGSLSPITLDV------RSGEGNTGRTACWLDFTSDGNTFFVSNAIEAGLASYSFDNGVVELIDQTAAVGTGTGGADNGPDAFARTDGWIDMWISDDGQFLYQL 422          
BLAST of Ggra10819.t1 vs. uniprot
Match: A0A5B1B9D4 (Lactonase family protein n=1 Tax=Aquimarina sp. RZ0 TaxID=2607730 RepID=A0A5B1B9D4_9FLAO)

HSP 1 Score: 113 bits (283), Expect = 3.730e-26
Identity = 76/213 (35.68%), Postives = 109/213 (51.17%), Query Frame = 0
Query:    2 FSPDRRTLVVTNLFAGLNAIAAGGVREIVTYSVNATGLLSVVPVANTASTELGNSEGRNLTGAIGLEVVEERGVQYVVVPEVRSLA--GADCMAPTDQAASVYTWALDSESMLSPVQLDVPVVPSVSSGQIDS----CWIMFSNDLSHFWVARTPTNATSLFSFDGGISTLEEEV-----------EGSVTFS-----VDLWLSIDSKFLYQL 192
            FSPD   LVV ++ +G  A+A+G   EIV Y VN+ G LS   VA   ST  GN++GRNL  AIG ++V   G  YVVV E R     G     P  Q  SV TW +  +  L+P+  DV       SG+ ++    CW+ F++D + F+V+       + FSFD G+  L ++             G   F+     +D+W+S D ++LYQL
Sbjct:  215 FSPDGNWLVVASINSGAAALASGSEDEIVVYGVNSDGTLSASQVAGATSTLRGNTDGRNLPSAIGFQIV---GNNYVVVTEAREFQPDGTPPAFPALQDGSVSTWQIQGDGSLTPISTDV------RSGEGNTGRTACWLDFTSDGNTFFVSNAIEAGLASFSFDNGVVALLDQTAASGIGTGGADNGPDAFARTEGWIDMWISDDGQYLYQL 418          
BLAST of Ggra10819.t1 vs. uniprot
Match: beta-propeller fold lactonase family protein n=1 Tax=Aquimarina sp. AU474 TaxID=2108529 RepID=UPI000D68D431 (beta-propeller fold lactonase family protein n=1 Tax=Aquimarina sp. AU474 TaxID=2108529 RepID=UPI000D68D431)

HSP 1 Score: 113 bits (283), Expect = 3.760e-26
Identity = 78/213 (36.62%), Postives = 107/213 (50.23%), Query Frame = 0
Query:    2 FSPDRRTLVVTNLFAGLNAIAAGGVREIVTYSVNATGLLSVVPVANTASTELGNSEGRNLTGAIGLEVVEERGVQYVVVPEVRSLA--GADCMAPTDQAASVYTWALDSESMLSPVQLDVPVVPSVSSGQIDS----CWIMFSNDLSHFWVARTPTNATSLFSFDGGISTLEEEVEGSVTFS----------------VDLWLSIDSKFLYQL 192
            FSPD   LVV ++ +G  A+A+G   EIV YSVN  G LS   ++   ST  GN+EGRNL  AIG ++V   G  YVVV E R     G     P  Q  SV TW +  +  L+P+ LDV       SG+ ++    CW+ FS D + F+V+       + FSF+ G   L  +   S T +                +D+W+S D +FLYQL
Sbjct:  216 FSPDGNWLVVASINSGAAALASGSEDEIVVYSVNTDGTLSTNQLSGATSTLRGNTEGRNLPSAIGFQIV---GNNYVVVTEAREFQPDGTPPAFPALQDGSVSTWQIQGDGSLTPITLDV------RSGENNTGRTACWLDFSADGNTFFVSNAIEAGLASFSFNNGAVELINQTAASGTGTGGADNGPDAFARTDGWIDMWISDDGQFLYQL 419          
BLAST of Ggra10819.t1 vs. uniprot
Match: lactonase family protein n=1 Tax=Aquimarina litoralis TaxID=584605 RepID=UPI001C56C19B (lactonase family protein n=1 Tax=Aquimarina litoralis TaxID=584605 RepID=UPI001C56C19B)

HSP 1 Score: 111 bits (278), Expect = 1.940e-25
Identity = 77/214 (35.98%), Postives = 107/214 (50.00%), Query Frame = 0
Query:    2 FSPDRRTLVVTNLFAGLNAIAAGGVREIVTYSVNATGLLSVVPVANTASTELGNSEGRNLTGAIGLEVVEERGVQYVVVPEVRSLA--GADCMAPTDQAASVYTWALDSESMLSPVQLDVPVVPSVSSGQIDS----CWIMFSNDLSHFWVARTPTNATSLFSFDGGISTLEEEVE-----------------GSVTFSVDLWLSIDSKFLYQL 192
            FSPD   LVV ++ +G  A+A+G   EIV Y VN  G LS   VA   ST   N EGRNL  AIG ++V   G  YVVV E R     G     P  Q  SV TW +  +  L+P+ LDV       SG+ ++    CW+ F+ D + F+V+       + FSF+ G+ TL ++V                  G+    +D+W+S D ++LYQL
Sbjct:  217 FSPDGNWLVVASINSGAAALASGSEDEIVVYGVNNDGTLSANQVAGATSTLRDNVEGRNLPSAIGFQIV---GNNYVVVTEAREFQPDGTPPAFPALQDGSVSTWQIQGDGSLNPISLDV------RSGEGNTGRTACWLDFTADGNTFFVSNAIEAGLASFSFNNGVVTLLDQVAAQGVGATGNTTDPGAAFGTTEGWIDMWISDDGQYLYQL 421          
BLAST of Ggra10819.t1 vs. uniprot
Match: A0A238ZBE0 (Uncharacterized protein n=1 Tax=Dokdonia pacifica TaxID=1627892 RepID=A0A238ZBE0_9FLAO)

HSP 1 Score: 111 bits (277), Expect = 2.860e-25
Identity = 75/213 (35.21%), Postives = 108/213 (50.70%), Query Frame = 0
Query:    2 FSPDRRTLVVTNLFAGLNAIAAGGVREIVTYSVNATGLLSVVPVANTASTELGNSEGRNLTGAIGLEVVEERGVQYVVVPEVRSLA--GADCMAPTDQAASVYTWALDSESMLSPVQLDVPVVPSVSSGQIDS----CWIMFSNDLSHFWVARTPTNATSLFSFDGGISTLEEEV-----------EGSVTFSV-----DLWLSIDSKFLYQL 192
            FSPD + L+V  + +G +A+ +G   E+  YSV   G LS   VA   ST   N+EGRNL  AIG ++V   G  YVVV E R     G     P  Q  SV TW +  +  L+P+ LDV      +SG+ ++    CW+ F+ D + F+V+       + +SFD G+ TL ++             G   F+V     D+W+S D +FLYQL
Sbjct:  226 FSPDGQWLLVAAINSGASALGSGSEDELTVYSVGGDGTLSASSVATATSTLRNNTEGRNLPSAIGFQIV---GNNYVVVTEAREFQPDGTPPAFPALQDGSVSTWQIQGDGSLTPISLDV------ASGENNTGRTACWLDFTADGNTFFVSNAIEAGLAAYSFDNGVVTLLDQTAAQGTGTGGADNGPDAFAVTEGWIDMWISDDGQFLYQL 429          
BLAST of Ggra10819.t1 vs. uniprot
Match: A0A5B1B8M7 (Lactonase family protein n=1 Tax=Aquimarina sp. RZ0 TaxID=2607730 RepID=A0A5B1B8M7_9FLAO)

HSP 1 Score: 105 bits (261), Expect = 5.260e-23
Identity = 78/213 (36.62%), Postives = 107/213 (50.23%), Query Frame = 0
Query:    2 FSPDRRTLVVTNLFAGLNAIAAGGVREIVTYSVNATGLLSVVPVANTASTELGNSEGRNLTGAIGLEVVEERGVQYVVVPEVRSLA--GADCMAPTDQAASVYTWALDSESMLSPVQLDVPVVPSVSSGQIDS----CWIMFSNDLSHFWVARTPTNATSLFSF-DGGISTLEEEV-EGSVTFS--------------VDLWLSIDSKFLYQL 192
            FSPD R L VT++ +G +A+A+    E+V Y     G ++  PV+   ST  GNSEGRNL  AIG ++V   G  YVVV E R     G     P  Q  SV TW +     L P+ LDV       SG+ ++    CW+ F+ D + F+V+       + FSF DG IS L +   +G+ T                +DLW+S D +FLYQL
Sbjct:  237 FSPDGRFLAVTSINSGSSALASRSQGELVVYRAFRNGRVTRRPVSAATSTLRGNSEGRNLPSAIGFQIV---GDNYVVVTEAREFQSDGTPPAFPALQDGSVSTWKISRSGRLIPINLDV------RSGENNTGRTACWLDFTADGNTFFVSNAIEAGLASFSFNDGQISLLNQTAAQGTGTLGATTGPEAFANTDGWIDLWISDDGQFLYQL 440          
BLAST of Ggra10819.t1 vs. uniprot
Match: lactonase family protein n=1 Tax=Winogradskyella sp. E313 TaxID=2816852 RepID=UPI001D0C94E3 (lactonase family protein n=1 Tax=Winogradskyella sp. E313 TaxID=2816852 RepID=UPI001D0C94E3)

HSP 1 Score: 100 bits (250), Expect = 1.640e-21
Identity = 72/220 (32.73%), Postives = 109/220 (49.55%), Query Frame = 0
Query:    3 SPDRRTLVVTNLFAGLNAIAAGGVREIVTYSVNATGLLSVVPVANTASTELGNSE-------GRNLTGAIGLEVVEERGVQYVVVPEVRSLA--GADCMAPTDQAASVYTWALDSESMLSPVQLDVPVVPSVSSGQIDS----CWIMFSNDLSHFWVARTPTNATSLFSFDGGISTLEEEVEGSVTFS-----------------VDLWLSIDSKFLYQL 192
            SPD + LVVT + +G +A+ +G   E+  ++++  GLLS  P     ST  GN+E       GRNL  AIG ++V   G  YVVV E R     GA    P  Q  SV TW +++   L+P+ LDV       SG+ ++    CW+ F+ D + F+V+       + +SF+ G   L ++V    T +                 +D+W+S D +FLYQL
Sbjct:  219 SPDGQWLVVTAINSGASALGSGSEDELTVFNISPNGLLSETPWGTATSTLRGNTEVQADGVIGRNLPSAIGFQIV---GNNYVVVTEAREFQYDGAPPAFPALQDGSVSTWQIEANGTLTPITLDV------RSGEGNTGRTACWLDFTADGNTFFVSNAIEAGLASYSFNNGSVALIDQVAAQGTGATGNTTDPAAAFGTTEGWIDMWISDDGQFLYQL 429          
BLAST of Ggra10819.t1 vs. uniprot
Match: A0A3A9XIX1 (Uncharacterized protein n=4 Tax=Aquimarina TaxID=290174 RepID=A0A3A9XIX1_9FLAO)

HSP 1 Score: 77.4 bits (189), Expect = 3.200e-13
Identity = 62/200 (31.00%), Postives = 93/200 (46.50%), Query Frame = 0
Query:   17 GLNAIAAGGVREIVTYSVNATGLLSVVPVANTASTELGNSEGRNLTGAIGLEVVEER-GVQYVVVPEVRSLA--GADCMAPTDQAASVYTWALDSESMLSPVQLDVPVVPSVSSGQIDS----CWIMFSNDLSHFWVARTPTNATSLFSFDGGISTLEEEVE-----------------GSVTFSVDLWLSIDSKFLYQL 192
            G  + A G   E+V + +N     S+  +    ST  GN+E RNL  AIG ++V    G  Y VV E R     GA    P  Q  SV TW +D + ++  V LDV       SG+ ++    CW+ F++D + F+V+       + FSF+ G+ TL ++                   G+    +D+W+S D  FLYQL
Sbjct:  244 GTGSTAVGNQDEVVLFGINGG---SLTRLDGATSTLRGNAEQRNLPSAIGSQIVRGTDGELYAVVTEAREFQYNGAPPAFPALQDGSVSTWRIDGDQLVD-VNLDV------RSGEGNTGRTACWLDFTSDENTFFVSNAIEAGLASFSFNNGVVTLLDQTAAQGVGATGNTTDPGAAFGTTEGWIDMWISDDGAFLYQL 433          
The following BLAST results are available for this feature:
BLAST of Ggra10819.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A2V3ILN11.210e-6962.18Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A162XSV25.510e-2737.09Uncharacterized protein n=2 Tax=Aquimarina TaxID=2... [more]
A0A5B1B9D43.730e-2635.68Lactonase family protein n=1 Tax=Aquimarina sp. RZ... [more]
beta-propeller fold lactonase family protein n=1 Tax=Aquimarina sp. AU474 TaxID=2108529 RepID=UPI000D68D4313.760e-2636.62beta-propeller fold lactonase family protein n=1 T... [more]
lactonase family protein n=1 Tax=Aquimarina litoralis TaxID=584605 RepID=UPI001C56C19B1.940e-2535.98lactonase family protein n=1 Tax=Aquimarina litora... [more]
A0A238ZBE02.860e-2535.21Uncharacterized protein n=1 Tax=Dokdonia pacifica ... [more]
A0A5B1B8M75.260e-2336.62Lactonase family protein n=1 Tax=Aquimarina sp. RZ... [more]
lactonase family protein n=1 Tax=Winogradskyella sp. E313 TaxID=2816852 RepID=UPI001D0C94E31.640e-2132.73lactonase family protein n=1 Tax=Winogradskyella s... [more]
A0A3A9XIX13.200e-1331.00Uncharacterized protein n=4 Tax=Aquimarina TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..194

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000192_piloncontigtig00000192_pilon:92381..92965 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10819.t1Ggra10819.t1Gracilaria gracilis GNS1m malemRNAtig00000192_pilon 92381..92965 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10819.t1 ID=Ggra10819.t1|Name=Ggra10819.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=195bp
MFSPDRRTLVVTNLFAGLNAIAAGGVREIVTYSVNATGLLSVVPVANTAS
TELGNSEGRNLTGAIGLEVVEERGVQYVVVPEVRSLAGADCMAPTDQAAS
VYTWALDSESMLSPVQLDVPVVPSVSSGQIDSCWIMFSNDLSHFWVARTP
TNATSLFSFDGGISTLEEEVEGSVTFSVDLWLSIDSKFLYQLQA*
back to top