Ggra10809.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10809.t1
Unique NameGgra10809.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length328
Homology
BLAST of Ggra10809.t1 vs. uniprot
Match: A0A2V3IIU3 (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIU3_9FLOR)

HSP 1 Score: 375 bits (964), Expect = 1.430e-127
Identity = 174/295 (58.98%), Postives = 221/295 (74.92%), Query Frame = 0
Query:   33 HLKLVLFGSNTRPSFFSIDGHVTHGVNSFNNKLVVNFSSSSLIFSSFPPLAEIGVRNPSGANASLITDSTPLFSQMATIDAFDFQTFLMLPPGVGPFNVPIAETPTFNLVSANITDRSTPFFFEDSIDPAILGQSYLSSMADANITLREWNKAASRLSGVCREGKARVRVQLQNALPNGLYTLWDVGVVSPLTTNETVTVGPFGGIPNVLATDEWGRASIVRDLNYCPFDKCIGAVRCTLSVSLNYHFDHVIFGGAPTLDFAGLAAGHVAANQMAIYPNGDFIITPQNKFRSFRW 327
            H    L  +N R  +FS+ GH+ HGVN FN+ L+ N+SSSS IFSSFPPLAEIGV  P G NASLIT++TPL S +ATIDAFDF+TFL  PPG GPFN+PI++ PTFNL S+++ +R TP  FE S DP ++GQ YLS+  + N+T+ +WN+A  R++G CR G A V +++QNALPNGL+++WDVGV   L  NET+++ PFGGIPNVL TD  GR SI R LNYCP D+C G+ RC+L +S+NYHFDHV++GGAPTLDF GL+AG VAANQ+    NGD +I   NKF  F W
Sbjct:   14 HFSSFLLLANAR--YFSVPGHIAHGVNDFNDNLLANYSSSSNIFSSFPPLAEIGVITPGGTNASLITENTPLSSIVATIDAFDFRTFLGFPPGAGPFNIPISQAPTFNLFSSSLLERVTPSSFESSSDPNVVGQVYLSAGVNDNVTVADWNRATGRMTGTCRNGTAHVYIEMQNALPNGLFSMWDVGVSMALAPNETLSLSPFGGIPNVLTTDRNGRGSISRRLNYCPLDECQGSSRCSLYLSMNYHFDHVVYGGAPTLDFGGLSAGQVAANQLVFILNGDVLIPVHNKFSFFLW 306          
BLAST of Ggra10809.t1 vs. uniprot
Match: A0A2A5HEK6 (Uncharacterized protein n=1 Tax=Alteromonadaceae bacterium TaxID=1916082 RepID=A0A2A5HEK6_9ALTE)

HSP 1 Score: 139 bits (350), Expect = 4.860e-35
Identity = 92/285 (32.28%), Postives = 136/285 (47.72%), Query Frame = 0
Query:   50 IDGHVTHGVNSFNNKLVVNFSSSSLI---FSSFPPLAEIGVRNPSGANASLITDSTPLFSQMATIDAFDFQTFLMLPPGVGPFNVPIAETPTFNLVSANI------TDRSTPFFFEDSIDPAILGQSYLSSMADANITLREWNKAASRLSGVCREGKARVRVQLQNALPNGLYTLWDVGVVSPLTTNETVTVGPFGGIPNVLATDEWGRASIVRDLNYCPFDKCI-GAVRCTLSVSLNYHFDHVIFGGAPTLDFAGLAAGHVAANQMAIYPNGDFIITPQNKFRS 324
            I G+  HGVN FNN  +V+++S        +  P L EIG   P   +A  ITD T   S +    +     F     GV  F  P     + +L+ +N+      TDR     FE     A  G +Y++   ++  T+ EW + +      C +    V + +++A PN LY+LWD+GV++P T +E V   PFGG+PNV+ TDE G         +CP   C  G   C+  +SL YH+D  I+GGA    F GL  G +  N +     G  +  P N+F+S
Sbjct:   32 ITGYAAHGVNVFNNHTLVDYTSEFPYAPGLNEIPALTEIGYFQPGADDAGTITDETD--SNLPVATSSSLARFF----GVVDFVDPSNFNQSLDLIGSNLMGYQSTTDRGLLVPFE----LAGPGDTYVAGGVNSRPTVGEWGEISGVARIRCDDDGGVVEISVRDAFPNQLYSLWDIGVLNPKTESEVVYSTPFGGLPNVMTTDENGCGYKKITTPFCPKRSCAEGEASCSAYISLFYHWDDQIYGGAAANTFGGLPLGVLGGNHIVWPMAGTAVNEPANEFKS 306          
BLAST of Ggra10809.t1 vs. uniprot
Match: F4XRX3 (Uncharacterized protein n=11 Tax=Moorena TaxID=1155738 RepID=F4XRX3_9CYAN)

HSP 1 Score: 101 bits (251), Expect = 4.600e-21
Identity = 74/230 (32.17%), Postives = 117/230 (50.87%), Query Frame = 0
Query:   85 IGVRNPSGANASLITDSTPLFSQMATI-DAF---DFQTFLMLPPGVGPFNVPIAETPTFNLVSANITDRSTPFFFEDSIDPAILGQSYLSSMADANITLREWNKAASRLSGVC-REGKARVRVQLQNALPNGLYTLWDVGVVSPLTTNETVTVGPFGGIPNVLATDEWGRASIVRDLNYCPFD---KCIGAVRCTLSVSLNYHFDHVIFGGAPTLDFAGLAAGHVAANQM 306
            +G+ NP+G     +T ST   + +A+I D F    F  F +     G  NVP+ +  T+  VS +++ R TP  F+  +D  ++ +S  +  +   IT+ +W KA+ ++   C   G  RVRV+L N +PN +YT+W +      T +  +   PFGG+PN   T+  G A   R LN+CP +   K I   R  LS+  + H DH+++G  P    AG   G V   Q+
Sbjct:   68 MGIYNPNGKEPLPLTASTRKDAVLASIVDPFLETIFPVFDLETTDPGAVNVPLRQIDTW--VSGDLSVR-TPLPFQ--LDAPVVSRSQSNPESPNPITVADWFKASGQMQINCDSRGNNRVRVRLNNLIPNRVYTVWAMWY----TADGNIFPQPFGGVPNAYVTNSRGNAVFSRQLNFCPPEAAKKGIDGNR-LLSIITHLHSDHILYGAVPVPLVAGRPPGTVLHMQL 287          
BLAST of Ggra10809.t1 vs. uniprot
Match: A0A4R5H990 (Uncharacterized protein n=1 Tax=Alteromonadaceae bacterium M269 TaxID=2546219 RepID=A0A4R5H990_9ALTE)

HSP 1 Score: 96.3 bits (238), Expect = 4.920e-19
Identity = 78/268 (29.10%), Postives = 120/268 (44.78%), Query Frame = 0
Query:   57 GVNSFNNKLVVNFSSSSLIFSSFPPLAEIGVRNPSGANAS-LITDSTPLFSQMATID----AFDFQTFLMLPPGVGPFNVPIAETPTFNLVSANITDRSTPFFFE--------------DSIDPAILGQSYLSSMADANITLREWNKAASRLSGVCRE-GKARVRVQLQNALPNGLYTLWDVGVVSPLTTNETVTVGPFGGIPNVLATDEWGRASIVRDLNYCPFDKCIGAVRCTLSVSLNYHFDHVIFGGAPTLDFAGLAAGHVAAN 304
            G N F  +L+  F    ++  SF    ++G  +P       L TD+      +ATI     +FD       PPG  P  VP  +    N+   ++    TP  F+              ++ +P+    + L+  +D  ITL +W  A  RLS  CR+ G A V  +  N +PNGLY++W +  ++     +  +  PFGG+PNV+ T+E GRA   R+L +CP ++        L VS+ YH D  I  G    + AG     V  N
Sbjct:   47 GTNRFCGQLLWTFEDQGVVPLSF---RQVGAHHPGSERPDELTTDNCTSDQVLATIHDPVLSFD-------PPGPAPAIVPAPDVRLENIPIRDVP--RTPDGFQGGGAGVRTLLQSPDEATNPSNPFPALLNQPSD-QITLGDWASAKGRLSYTCRDDGTAEVSARFSNLVPNGLYSMWGIWRITIPFAGDITSASPFGGVPNVVTTNERGRARFSRELPFCPSEESEDG-SLLLWVSVVYHADSAISAGVA--ETAGAVVQFVDVN 298          
BLAST of Ggra10809.t1 vs. uniprot
Match: A0A3B1CIP4 (Uncharacterized protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1CIP4_9ZZZZ)

HSP 1 Score: 77.0 bits (188), Expect = 1.050e-12
Identity = 58/179 (32.40%), Postives = 84/179 (46.93%), Query Frame = 0
Query:  124 PGVGPFNVPIAETPTFNLVSANITDRSTPFFFEDSIDPAILGQSYLSSMADANITLREW-NKAASRLS-GVCREGKARVRVQLQNALPNGLYTLWDVGVVSPLTTNETVTVGPFGGIPNVLATDEWGRASIVRDLNYCPFDKCIGAVRCTLSVSLNYHFDHVIFGGAPTLDFAGLAAGH 300
            P  G   VP+ + PT       IT+   P   ++SI      +          IT  +W N   S+L   V   G +++R++++  LPN LYT+W   V+           GPFGGIPN LATD  G AS+ R L +   +K +G +       L YH DH ++GG P+     + AGH
Sbjct:   75 PADGSSPVPLRQVPTLY-----ITEGLEPAIIDESISAENPMRGLAFPGMPNPITYGDWVNIGESKLVVKVLDNGMSKIRMKVKGLLPNSLYTVWQFNVMPG-------PPGPFGGIPNALATDHKGNASLRRILPFNVLEK-VGRLM------LIYHSDHSVYGGTPSR--INVFAGH 232          
The following BLAST results are available for this feature:
BLAST of Ggra10809.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IIU31.430e-12758.98Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2A5HEK64.860e-3532.28Uncharacterized protein n=1 Tax=Alteromonadaceae b... [more]
F4XRX34.600e-2132.17Uncharacterized protein n=11 Tax=Moorena TaxID=115... [more]
A0A4R5H9904.920e-1929.10Uncharacterized protein n=1 Tax=Alteromonadaceae b... [more]
A0A3B1CIP41.050e-1232.40Uncharacterized protein n=1 Tax=hydrothermal vent ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000192_piloncontigtig00000192_pilon:15280..17404 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10809.t1Ggra10809.t1Gracilaria gracilis GNS1m malemRNAtig00000192_pilon 15280..17404 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10809.t1 ID=Ggra10809.t1|Name=Ggra10809.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=328bp
MSSGAELLMAWEVDAEDAKYIMRAELRYISPQHLKLVLFGSNTRPSFFSI
DGHVTHGVNSFNNKLVVNFSSSSLIFSSFPPLAEIGVRNPSGANASLITD
STPLFSQMATIDAFDFQTFLMLPPGVGPFNVPIAETPTFNLVSANITDRS
TPFFFEDSIDPAILGQSYLSSMADANITLREWNKAASRLSGVCREGKARV
RVQLQNALPNGLYTLWDVGVVSPLTTNETVTVGPFGGIPNVLATDEWGRA
SIVRDLNYCPFDKCIGAVRCTLSVSLNYHFDHVIFGGAPTLDFAGLAAGH
VAANQMAIYPNGDFIITPQNKFRSFRW*
back to top