Ggra10824.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10824.t1
Unique NameGgra10824.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length121
Homology
The following BLAST results are available for this feature:
BLAST of Ggra10824.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021262Protein of unknown function DUF2839PFAMPF10999DUF2839coord: 58..112
e-value: 1.4E-5
score: 25.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..79
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 114..120
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 90..113
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..89
NoneNo IPR availableTMHMMTMhelixcoord: 92..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000192_piloncontigtig00000192_pilon:122699..123061 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10824.t1Ggra10824.t1Gracilaria gracilis GNS1m malemRNAtig00000192_pilon 122699..123061 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10824.t1 ID=Ggra10824.t1|Name=Ggra10824.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=121bp
MARGRRSRVRNGKLGDGKRGASSRATQRAGEQHLVDQFDEDVKAPLDSRS
ASSSSSSRRAKDRDRTDRPDRRQAPSLSFTLPGRTETLNLLVRGAWVGIG
ILAGVFVLVHFVLVKDFLPK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021262DUF2839