Ggra10824.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10824.t1
Unique NameGgra10824.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length121
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000192_piloncontigtig00000192_pilon:122699..123061 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10824Ggra10824Gracilaria gracilis GNS1m malegenetig00000192_pilon 122699..123061 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10824.t1.stop1Ggra10824.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000192_pilon 122699..122701 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10824.t1.CDS1Ggra10824.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000192_pilon 122699..123061 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10824.t1.exon1Ggra10824.t1.exon1Gracilaria gracilis GNS1m maleexontig00000192_pilon 122699..123061 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10824.t1.start1Ggra10824.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000192_pilon 123059..123061 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10824.t1Ggra10824.t1Gracilaria gracilis GNS1m malepolypeptidetig00000192_pilon 122699..123061 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10824.t1 ID=Ggra10824.t1|Name=Ggra10824.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=121bp
MARGRRSRVRNGKLGDGKRGASSRATQRAGEQHLVDQFDEDVKAPLDSRS
ASSSSSSRRAKDRDRTDRPDRRQAPSLSFTLPGRTETLNLLVRGAWVGIG
ILAGVFVLVHFVLVKDFLPK*
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spliced messenger RNA

>Ggra10824.t1 ID=Ggra10824.t1|Name=Ggra10824.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=363bp|location=Sequence derived from alignment at tig00000192_pilon:122699..123061- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGCGTGGAAGACGATCGCGCGTGCGCAACGGTAAGCTGGGCGACGG
CAAGCGTGGCGCGTCCTCACGTGCCACGCAGCGTGCCGGCGAACAGCATT
TGGTCGATCAGTTTGACGAAGACGTCAAGGCGCCGCTTGATTCGCGCTCG
GCGTCGTCCTCGTCGTCGTCGAGACGCGCCAAAGATCGCGATCGCACGGA
TCGCCCCGATCGGCGGCAGGCGCCGTCGTTGTCGTTTACGCTGCCTGGAC
GCACGGAGACGCTCAATTTGTTGGTGAGGGGCGCTTGGGTGGGCATTGGC
ATTCTGGCCGGCGTGTTTGTGTTGGTGCACTTTGTTCTTGTCAAAGACTT
TTTGCCAAAGTAG
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protein sequence of Ggra10824.t1

>Ggra10824.t1 ID=Ggra10824.t1|Name=Ggra10824.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=121bp
MARGRRSRVRNGKLGDGKRGASSRATQRAGEQHLVDQFDEDVKAPLDSRS
ASSSSSSRRAKDRDRTDRPDRRQAPSLSFTLPGRTETLNLLVRGAWVGIG
ILAGVFVLVHFVLVKDFLPK*
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mRNA from alignment at tig00000192_pilon:122699..123061-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10824.t1 ID=Ggra10824.t1|Name=Ggra10824.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=363bp|location=Sequence derived from alignment at tig00000192_pilon:122699..123061- (Gracilaria gracilis GNS1m male)
ATGGCGCGTGGAAGACGATCGCGCGTGCGCAACGGTAAGCTGGGCGACGG
CAAGCGTGGCGCGTCCTCACGTGCCACGCAGCGTGCCGGCGAACAGCATT
TGGTCGATCAGTTTGACGAAGACGTCAAGGCGCCGCTTGATTCGCGCTCG
GCGTCGTCCTCGTCGTCGTCGAGACGCGCCAAAGATCGCGATCGCACGGA
TCGCCCCGATCGGCGGCAGGCGCCGTCGTTGTCGTTTACGCTGCCTGGAC
GCACGGAGACGCTCAATTTGTTGGTGAGGGGCGCTTGGGTGGGCATTGGC
ATTCTGGCCGGCGTGTTTGTGTTGGTGCACTTTGTTCTTGTCAAAGACTT
TTTGCCAAAGTAG
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Coding sequence (CDS) from alignment at tig00000192_pilon:122699..123061-

>Ggra10824.t1 ID=Ggra10824.t1|Name=Ggra10824.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=363bp|location=Sequence derived from alignment at tig00000192_pilon:122699..123061- (Gracilaria gracilis GNS1m male)
ATGGCGCGTGGAAGACGATCGCGCGTGCGCAACGGTAAGCTGGGCGACGG
CAAGCGTGGCGCGTCCTCACGTGCCACGCAGCGTGCCGGCGAACAGCATT
TGGTCGATCAGTTTGACGAAGACGTCAAGGCGCCGCTTGATTCGCGCTCG
GCGTCGTCCTCGTCGTCGTCGAGACGCGCCAAAGATCGCGATCGCACGGA
TCGCCCCGATCGGCGGCAGGCGCCGTCGTTGTCGTTTACGCTGCCTGGAC
GCACGGAGACGCTCAATTTGTTGGTGAGGGGCGCTTGGGTGGGCATTGGC
ATTCTGGCCGGCGTGTTTGTGTTGGTGCACTTTGTTCTTGTCAAAGACTT
TTTGCCAAAGTAG
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