Ggra9997.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9997.t1
Unique NameGgra9997.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length147
Homology
BLAST of Ggra9997.t1 vs. uniprot
Match: A0A2V3IMT8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMT8_9FLOR)

HSP 1 Score: 147 bits (372), Expect = 1.500e-43
Identity = 76/103 (73.79%), Postives = 82/103 (79.61%), Query Frame = 0
Query:   43 MALRMRALTRAFHSSRLARGGXXXXGLGPFAETEVNEPGGRLFGEAIRKPGERRKLFDWEVPYLGTLFLATVILGVGLNSRPGMSANEWAKEEAKARMAARGE 145
            MA R+R+ +RAFHSSR  RGG      G F ETEVNEPGGRLFGEAIRKPGERRKLFDWEVPY+GTL LA V+LG GLNSRP MS   WA+EEA AR AARGE
Sbjct:    1 MAFRLRSFSRAFHSSRSVRGGG-----GLFGETEVNEPGGRLFGEAIRKPGERRKLFDWEVPYIGTLVLAGVMLGFGLNSRPNMSPQAWAREEALARAAARGE 98          
BLAST of Ggra9997.t1 vs. uniprot
Match: R7QA24 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QA24_CHOCR)

HSP 1 Score: 122 bits (305), Expect = 2.810e-33
Identity = 65/99 (65.66%), Postives = 74/99 (74.75%), Query Frame = 0
Query:   43 MALRMRALTRAFHSSRLARGGXXXXGLGPFAETE-VNEPGGRLFGEAIRKPGERRKLFDWEVPYLGTLFLATVILGVGLNSRPGMSANEWAKEEAKARM 140
            MA R R L+RAFH+SR  R        GP + TE  NEPGGRLFGEAIR+PGERRKLFDWEVPY+GTL LA ++LG GLNSRP  SA  WA+EEA AR+
Sbjct:    1 MAFRARLLSRAFHASRAVRAAE-----GPGSTTEHFNEPGGRLFGEAIRQPGERRKLFDWEVPYIGTLVLAGLMLGFGLNSRPETSALVWAREEALARL 94          
BLAST of Ggra9997.t1 vs. uniprot
Match: A0A2T9ZBF1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial n=1 Tax=Smittium megazygosporum TaxID=133381 RepID=A0A2T9ZBF1_9FUNG)

HSP 1 Score: 67.8 bits (164), Expect = 5.220e-12
Identity = 45/98 (45.92%), Postives = 58/98 (59.18%), Query Frame = 0
Query:   51 TRAFHSSRLARGGXXXXGLGPFAETEVNEPGGRLFGEAIRKPGERRKLFDWE-VPYLGTLFLATVILG-VGLNSRPGMSANEWAKEEAKARMAARGEL 146
            TR   SSRL RGG         AE E NEPGG LF    RKPGE+ +   WE + Y G  F+ T+I   VG+  +P  +   WA++EA+ARMAARG++
Sbjct:   11 TRRISSSRLLRGGH--------AEPEFNEPGGYLFN---RKPGEKYQKESWENITYYG--FIGTMIFAAVGVYFKPDTTIRGWARKEAEARMAARGDV 95          
BLAST of Ggra9997.t1 vs. uniprot
Match: C1EEF8 (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EEF8_MICCC)

HSP 1 Score: 65.5 bits (158), Expect = 4.410e-11
Identity = 36/77 (46.75%), Postives = 45/77 (58.44%), Query Frame = 0
Query:   70 GPFAETEVNEP--GGRLFGEAIRKPGERRKLFDWEVPYLGTLFLATVILGVGLNSRPGMSANEWAKEEAKARMAARG 144
            G FAE    E    GRLF E    PG+ RK  DWE P+  T+     IL  GL+++P  S +EWA+EEAK R+AA G
Sbjct:   31 GYFAEGVQGEGHVNGRLFNETPPPPGQSRKWEDWEAPWYATMAAVGAILVFGLSAKPETSGSEWAREEAKRRLAASG 107          
BLAST of Ggra9997.t1 vs. uniprot
Match: A0A286URI8 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial n=1 Tax=Pyrrhoderma noxium TaxID=2282107 RepID=A0A286URI8_9AGAM)

HSP 1 Score: 57.4 bits (137), Expect = 5.390e-8
Identity = 31/68 (45.59%), Postives = 38/68 (55.88%), Query Frame = 0
Query:   78 NEPGGRLFGEAIRKPGERRKLFDWEVPYLGTLFLATVILGVGLNSRPGMSANEWAKEEAKARMAARGE 145
            NEP G LFGE    PG+ R+   WE  +   +F    + GV +  +P  S   WA EEAKARM ARGE
Sbjct:   31 NEPSGWLFGEKPPAPGQTRRRETWETMWYWGMFGGMGLAGVLMYYKPDTSIQNWALEEAKARMEARGE 98          
BLAST of Ggra9997.t1 vs. uniprot
Match: G4U2L1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial n=1 Tax=Serendipita indica (strain DSM 11827) TaxID=1109443 RepID=G4U2L1_SERID)

HSP 1 Score: 55.1 bits (131), Expect = 6.230e-7
Identity = 42/113 (37.17%), Postives = 57/113 (50.44%), Query Frame = 0
Query:   39 TEVIMALRMRALTRAFHS--SRLARGGXXXXGLGPFAETEVNEPGGRLFGEAIRKPGERRKLFDWEVPYL----GTLFLATVILGVGLNSRPGMSANEWAKEEAKARMAARGE 145
            T ++ A++ R +    HS  S +A GG      G       NEP G LF E  +K G +R   DWE+ +     G++ LAT I       RP  S + WA EEAKAR+ ARG+
Sbjct:    6 TGLLRAIKHRTIPINSHSTVSAVALGGRRYASQG----EHFNEPSGLLFSELPQKDGSKRPREDWELIWHIGMGGSIVLATAIFYF----RPDTSISNWALEEAKARLEARGD 110          
BLAST of Ggra9997.t1 vs. uniprot
Match: hypothetical protein n=1 Tax=Stereum hirsutum (strain FP-91666) TaxID=721885 RepID=UPI000440D8F6 (hypothetical protein n=1 Tax=Stereum hirsutum (strain FP-91666) TaxID=721885 RepID=UPI000440D8F6)

HSP 1 Score: 53.5 bits (127), Expect = 1.650e-6
Identity = 31/69 (44.93%), Postives = 41/69 (59.42%), Query Frame = 0
Query:   78 NEPGGRLFGEAIRKPGERRKLFDWE-VPYLGTLFLATVILGVGLNSRPGMSANEWAKEEAKARMAARGE 145
            NEP G LFGE    PG++R   DWE + Y+G +F   + + V L  +P  +   WA +EAK RM ARGE
Sbjct:   31 NEPSGYLFGEKPPAPGQKRVKEDWENIWYIG-MFGGMIGVSVLLYYKPDSAVQNWALQEAKQRMEARGE 98          
The following BLAST results are available for this feature:
BLAST of Ggra9997.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3IMT81.500e-4373.79Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QA242.810e-3365.66Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2T9ZBF15.220e-1245.92NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
C1EEF84.410e-1146.75Uncharacterized protein n=1 Tax=Micromonas commoda... [more]
A0A286URI85.390e-845.59NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
G4U2L16.230e-737.17NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
hypothetical protein n=1 Tax=Stereum hirsutum (strain FP-91666) TaxID=721885 RepID=UPI000440D8F61.650e-644.93hypothetical protein n=1 Tax=Stereum hirsutum (str... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR40637ESSS SUBUNIT OF NADH:UBIQUINONE OXIDOREDUCTASE (COMPLEX I) PROTEINcoord: 43..144
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 103..120
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..102
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 121..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000213_piloncontigtig00000213_pilon:139358..140025 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9997.t1Ggra9997.t1Gracilaria gracilis GNS1m malemRNAtig00000213_pilon 139358..140025 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9997.t1 ID=Ggra9997.t1|Name=Ggra9997.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=147bp
MSSSNFEVLVSGTGCDHQAHTKSHGRSSNASLHRATDITEVIMALRMRAL
TRAFHSSRLARGGGGGGGLGPFAETEVNEPGGRLFGEAIRKPGERRKLFD
WEVPYLGTLFLATVILGVGLNSRPGMSANEWAKEEAKARMAARGEL*
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