Ggra9994.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9994.t1
Unique NameGgra9994.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length143
Homology
BLAST of Ggra9994.t1 vs. uniprot
Match: A0A2V3IMT3 (40S ribosomal protein S12 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMT3_9FLOR)

HSP 1 Score: 266 bits (679), Expect = 8.560e-90
Identity = 134/139 (96.40%), Postives = 136/139 (97.84%), Query Frame = 0
Query:    5 EVAIDAVPEDVGEMDILKALQEVLKKSLVHDGLVRGLNEVAKALDRGQAQLCILASDCDEPRYTRLIEALCAAHEVALVRVPDKKQLGEWAGLCKIDEEGNATKVVGSTSCVIKEFGESSPGYEFLLEYLKENK-DGDE 142
            EV +DAVPEDVGEMDILKALQEVLKKSLVHDGLVRGLNEV KALDRGQAQLCILASDCDEPRYTRLIEALCAAHEVALVRVPDKKQLGEWAGLCKIDEEGNATKVVG+TSCVIKEFGESSPGYEFLLEYLKENK DGDE
Sbjct:    4 EVPVDAVPEDVGEMDILKALQEVLKKSLVHDGLVRGLNEVVKALDRGQAQLCILASDCDEPRYTRLIEALCAAHEVALVRVPDKKQLGEWAGLCKIDEEGNATKVVGATSCVIKEFGESSPGYEFLLEYLKENKEDGDE 142          
BLAST of Ggra9994.t1 vs. uniprot
Match: R7QB31 (40S ribosomal protein S12 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QB31_CHOCR)

HSP 1 Score: 231 bits (589), Expect = 6.720e-76
Identity = 114/130 (87.69%), Postives = 123/130 (94.62%), Query Frame = 0
Query:   13 EDVGEMDILKALQEVLKKSLVHDGLVRGLNEVAKALDRGQAQLCILASDCDEPRYTRLIEALCAAHEVALVRVPDKKQLGEWAGLCKIDEEGNATKVVGSTSCVIKEFGESSPGYEFLLEYLKENKDGDE 142
            EDVGEMD++KALQEV+KK++VHDGLVRGLNE AKALDRG AQLC+LASDCDEP YTRLIEALC+AH VALVRVPDKKQLGEWAGLCKIDEEGNATKVVGST  VIKEFGESSPGYEFLLEY+KE+K GDE
Sbjct:   26 EDVGEMDLMKALQEVMKKAIVHDGLVRGLNECAKALDRGLAQLCVLASDCDEPAYTRLIEALCSAHSVALVRVPDKKQLGEWAGLCKIDEEGNATKVVGSTCVVIKEFGESSPGYEFLLEYIKEDK-GDE 154          
BLAST of Ggra9994.t1 vs. uniprot
Match: A0A2V3INP5 (40S ribosomal protein S12 n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INP5_9FLOR)

HSP 1 Score: 225 bits (574), Expect = 1.480e-73
Identity = 110/121 (90.91%), Postives = 115/121 (95.04%), Query Frame = 0
Query:   18 MDILKALQEVLKKSLVHDGLVRGLNEVAKALDRGQAQLCILASDCDEPRYTRLIEALCAAHEVALVRVPDKKQLGEWAGLCKIDEEGNATKVVGSTSCVIKEFGESSPGYEFLLEYLKENK 138
            MDILKALQEVLKKS+VHDGL RGLNEV KALDRGQ QLCILASDCDEPRYTRLI+ALCA HEVALVRVPDKKQLGEWAGLCKID+EGNA KVVG+TSCVIKEFGESSPGYE LLEYLKE+K
Sbjct:    1 MDILKALQEVLKKSVVHDGLFRGLNEVVKALDRGQVQLCILASDCDEPRYTRLIDALCAVHEVALVRVPDKKQLGEWAGLCKIDKEGNAAKVVGATSCVIKEFGESSPGYELLLEYLKESK 121          
BLAST of Ggra9994.t1 vs. uniprot
Match: A0A1X6P156 (40S ribosomal protein S12 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P156_PORUM)

HSP 1 Score: 193 bits (490), Expect = 6.840e-61
Identity = 92/124 (74.19%), Postives = 105/124 (84.68%), Query Frame = 0
Query:   16 GEMDILKALQEVLKKSLVHDGLVRGLNEVAKALDRGQAQLCILASDCDEPRYTRLIEALCAAHEVALVRVPDKKQLGEWAGLCKIDEEGNATKVVGSTSCVIKEFGESSPGYEFLLEYLKENKD 139
            G MD++KALQE+LKK++VHDGLVRGL E AKALDR +AQLCILA DCDEP YTRLIEALCA H +  VRVP+KKQLGEWAGLCKID EG ATKVVG T  V+K+FGE S G+EFLL+YL  NK+
Sbjct:   25 GAMDLMKALQEILKKAIVHDGLVRGLRECAKALDRREAQLCILAQDCDEPAYTRLIEALCAEHSINFVRVPEKKQLGEWAGLCKIDAEGVATKVVGCTCAVVKQFGERSAGFEFLLDYLNANKE 148          
BLAST of Ggra9994.t1 vs. uniprot
Match: A0A2V3IBS1 (40S ribosomal protein S12 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBS1_9FLOR)

HSP 1 Score: 182 bits (461), Expect = 6.780e-57
Identity = 94/121 (77.69%), Postives = 98/121 (80.99%), Query Frame = 0
Query:   18 MDILKALQEVLKKSLVHDGLVRGLNEVAKALDRGQAQLCILASDCDEPRYTRLIEALCAAHEVALVRVPDKKQLGEWAGLCKIDEEGNATKVVGSTSCVIKEFGESSPGYEFLLEYLKENK 138
            MDILKALQEVLKKS+VH    RGLNEV KALDRGQ QLCILASDCDEPRYTRLI+ALCA HEVALVRVPDKKQLGEWAGLCKID+E               EFGESSPGYE LLEYLKE+K
Sbjct:    1 MDILKALQEVLKKSVVHTDWFRGLNEVVKALDRGQVQLCILASDCDEPRYTRLIDALCAVHEVALVRVPDKKQLGEWAGLCKIDKE---------------EFGESSPGYELLLEYLKESK 106          
BLAST of Ggra9994.t1 vs. uniprot
Match: A0A5J4Z5L5 (40S ribosomal protein S12 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z5L5_PORPP)

HSP 1 Score: 180 bits (456), Expect = 8.430e-56
Identity = 92/137 (67.15%), Postives = 109/137 (79.56%), Query Frame = 0
Query:    3 EGEVAIDA-VPE--DVGEMDILKALQEVLKKSLVHDGLVRGLNEVAKALDRGQAQLCILASDCDEPRYTRLIEALCAAHEVALVRVPDKKQLGEWAGLCKIDEEGNATKVVGSTSCVIKEFGESSPGYEFLLEYLKE 136
            E EVA  A  PE  D GEMDI KALQEVLKK+L+HDGL+RGL E AKALDRG+AQLC+LASDCDEP YTRL+EALCA   + LV+VP+K QLGEWAGL K+DE+G  TK V ++  V+K+FGE S G +FL EYL+E
Sbjct:    4 EMEVAAPAPAPEVVDEGEMDITKALQEVLKKALIHDGLLRGLRECAKALDRGEAQLCVLASDCDEPAYTRLVEALCAERGINLVKVPEKMQLGEWAGLAKVDEQGIVTKSVKASCVVVKDFGEQSKGLDFLKEYLRE 140          
BLAST of Ggra9994.t1 vs. uniprot
Match: A0A7S0ZM77 (40S ribosomal protein S12 n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZM77_9RHOD)

HSP 1 Score: 173 bits (439), Expect = 3.150e-53
Identity = 90/134 (67.16%), Postives = 107/134 (79.85%), Query Frame = 0
Query:    5 EVAID-AVPEDVGE--MDILKALQEVLKKSLVHDGLVRGLNEVAKALDRGQAQLCILASDCDEPRYTRLIEALCAAHEVALVRVPDKKQLGEWAGLCKIDEEGNATKVVGSTSCVIKEFGESSPGYEFLLEYLK 135
            EV ++ +VPE + E  MDI  ALQEVLK +L+HDGLVRGL E AKALDR QAQLCILASDCDEP YTRL+EALCA   + LV+VP+K QLG+WAGL KIDE G ATKVV ++  V+K+FG++S G EFLL YLK
Sbjct:    7 EVEVETSVPEVLDESVMDITMALQEVLKVALIHDGLVRGLRECAKALDRRQAQLCILASDCDEPAYTRLVEALCAERGINLVKVPEKMQLGQWAGLAKIDETGTATKVVKASCVVVKDFGDTSKGLEFLLNYLK 140          
BLAST of Ggra9994.t1 vs. uniprot
Match: U4TUS6 (40S ribosomal protein S12 n=2 Tax=Dendroctonus ponderosae TaxID=77166 RepID=U4TUS6_DENPD)

HSP 1 Score: 167 bits (422), Expect = 1.300e-50
Identity = 77/123 (62.60%), Postives = 99/123 (80.49%), Query Frame = 0
Query:   16 GEMDILKALQEVLKKSLVHDGLVRGLNEVAKALDRGQAQLCILASDCDEPRYTRLIEALCAAHEVALVRVPDKKQLGEWAGLCKIDEEGNATKVVGSTSCVIKEFGESSPGYEFLLEYLKENK 138
            G MD+ +ALQEVLKK+L+HDG+V GL+E AKALD+ QA LC+LA +CDEPRY +L++ALCA H++ L++V + K+LGEW+GLCKID  G A KVVGS+  VIK+FGE SP  + L EYLK NK
Sbjct:   22 GPMDVNQALQEVLKKALIHDGVVHGLHEAAKALDKRQAVLCVLAENCDEPRYKQLVQALCAEHQIDLIKVDNNKKLGEWSGLCKIDSTGKARKVVGSSCVVIKDFGEESPALDVLKEYLKNNK 144          
BLAST of Ggra9994.t1 vs. uniprot
Match: M1XYD7 (40S ribosomal protein S12 n=1 Tax=Sycon ciliatum TaxID=27933 RepID=M1XYD7_9METZ)

HSP 1 Score: 161 bits (407), Expect = 1.980e-48
Identity = 78/134 (58.21%), Postives = 100/134 (74.63%), Query Frame = 0
Query:    2 SEGEVAIDAVPEDVGEMDILKALQEVLKKSLVHDGLVRGLNEVAKALDRGQAQLCILASDCDEPRYTRLIEALCAAHEVALVRVPDKKQLGEWAGLCKIDEEGNATKVVGSTSCVIKEFGESSPGYEFLLEYLK 135
            +EG+    AV      MDI  AL EVLK SL+HDGL RGL+E AKALD+ QA LC+LAS+CDEP Y RL+EALCA H++ L++V D K+LGEW+GLCK+D+EG A KVVG +  V+K++G+ S   + LLEYLK
Sbjct:    3 AEGDAPAAAV-----SMDITTALTEVLKTSLIHDGLARGLHEAAKALDKRQAHLCVLASNCDEPSYVRLVEALCAEHQIKLLKVDDSKKLGEWSGLCKLDKEGKARKVVGCSCVVVKDYGKESQALDVLLEYLK 131          
BLAST of Ggra9994.t1 vs. uniprot
Match: 40S ribosomal protein S12 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A7286 (40S ribosomal protein S12 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A7286)

HSP 1 Score: 160 bits (406), Expect = 3.090e-48
Identity = 78/135 (57.78%), Postives = 101/135 (74.81%), Query Frame = 0
Query:    1 MSEGEVAIDAVPEDVGEMDILKALQEVLKKSLVHDGLVRGLNEVAKALDRGQAQLCILASDCDEPRYTRLIEALCAAHEVALVRVPDKKQLGEWAGLCKIDEEGNATKVVGSTSCVIKEFGESSPGYEFLLEYLK 135
            MS+ E      P   G MDI  ALQEVLK +L+H+GLVRGL+E AKALDR QA LCILA++CDEP Y +L+EALCA H + L+RV D K+LGEW+GLCKID+EG A KVVG +  VI ++G+ SP ++ +++Y K
Sbjct:    1 MSDTEGGDVPSPAPGGPMDINTALQEVLKTALIHNGLVRGLHEAAKALDRRQAHLCILANNCDEPMYVKLVEALCAEHTIKLLRVDDSKKLGEWSGLCKIDKEGKARKVVGCSCVVITDYGKESPAHDVVMQYSK 135          
The following BLAST results are available for this feature:
BLAST of Ggra9994.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IMT38.560e-9096.4040S ribosomal protein S12 n=1 Tax=Gracilariopsis c... [more]
R7QB316.720e-7687.6940S ribosomal protein S12 n=1 Tax=Chondrus crispus... [more]
A0A2V3INP51.480e-7390.9140S ribosomal protein S12 n=2 Tax=Gracilariopsis c... [more]
A0A1X6P1566.840e-6174.1940S ribosomal protein S12 n=1 Tax=Porphyra umbilic... [more]
A0A2V3IBS16.780e-5777.6940S ribosomal protein S12 n=1 Tax=Gracilariopsis c... [more]
A0A5J4Z5L58.430e-5667.1540S ribosomal protein S12 n=1 Tax=Porphyridium pur... [more]
A0A7S0ZM773.150e-5367.1640S ribosomal protein S12 n=1 Tax=Timspurckia olig... [more]
U4TUS61.300e-5062.6040S ribosomal protein S12 n=2 Tax=Dendroctonus pon... [more]
M1XYD71.980e-4858.2140S ribosomal protein S12 n=1 Tax=Sycon ciliatum T... [more]
40S ribosomal protein S12 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A72863.090e-4857.7840S ribosomal protein S12 n=1 Tax=Exaiptasia diaph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000530Ribosomal protein S12ePRINTSPR00972RIBSOMALS12Ecoord: 27..40
score: 65.58
coord: 41..57
score: 56.68
coord: 107..120
score: 37.01
coord: 82..103
score: 63.64
IPR000530Ribosomal protein S12ePANTHERPTHR1184340S RIBOSOMAL PROTEIN S12coord: 12..137
IPR000530Ribosomal protein S12ePROSITEPS01189RIBOSOMAL_S12Ecoord: 23..41
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 3..137
e-value: 8.5E-51
score: 172.7
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 17..136
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 23..115
e-value: 7.4E-30
score: 102.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000213_piloncontigtig00000213_pilon:136320..136748 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9994.t1Ggra9994.t1Gracilaria gracilis GNS1m malemRNAtig00000213_pilon 136320..136748 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9994.t1 ID=Ggra9994.t1|Name=Ggra9994.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=143bp
MSEGEVAIDAVPEDVGEMDILKALQEVLKKSLVHDGLVRGLNEVAKALDR
GQAQLCILASDCDEPRYTRLIEALCAAHEVALVRVPDKKQLGEWAGLCKI
DEEGNATKVVGSTSCVIKEFGESSPGYEFLLEYLKENKDGDE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000530Ribosomal_S12e
IPR029064L30e-like
IPR004038Ribosomal_L7Ae/L30e/S12e/Gad45