Ggra9976.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9976.t1
Unique NameGgra9976.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length483
Homology
BLAST of Ggra9976.t1 vs. uniprot
Match: A0A2V3J5K7 (Indian hedgehog B protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5K7_9FLOR)

HSP 1 Score: 325 bits (834), Expect = 6.840e-103
Identity = 199/471 (42.25%), Postives = 260/471 (55.20%), Query Frame = 0
Query:   31 RFATAADAEASWRVVERAGAGADRACPPSITHTSWMRLSASAVALPHSTLLMGRVRCDGLRSQPALRLYVSSQYAHDLSPL-PGAHALPPRMRRLLLGVAPNIAARAALLEAREQFLMGFESSDRSCGGAALFGSGTTAFLFRPFAPLRIANLSTPFVPGAKYLLMIPPFKATTCVYSASLRVPVEVPTTILPPDSPQP------------TADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAAEDNEGDDHNGD----------------DDDDACFPASARVSLRNGSTVRMCDLRVGDQVQVSRHAYSRVFAFSHRDARARATFYTLRTRSGLELSATKRHLIRAADRRLLRADGVRVGQLLRTVGGRSAVVAIRTQRLQGLYNAHTTHGDIVVNGVLASTYTASVRPRVAHAALAPLRALSALCQADALSPLLAARLHKLPARAWLR 472
            R ATAAD EA+W +VE AG+     CP SITHT+WM LS S+ AL H T+L+ R+RCDG  S+  L  Y SS Y  +L+P+ P    LP RMR+++     N    +A+    EQFL+G+ES++R C G   F +GTTA+L RPF P  I N++T F+PG+KYLLM+P     TCVYSA+L   V+VP T  P  +P+P            +A                                                    D E  +  G+                DDDD CFP SA V+L +GS+ RM  L VGD+V V  + YSR+FAFSHRDA  +  FYTL T SG  +SAT+ H I  A+   +  + V+VGQ LRT+ G   VV +  Q ++GLYN  T  GDI+VNGV+ASTYT SV P VAHAALAPLRA+S +C+ D L  LL + + +LP R W+R
Sbjct:   29 RLATAADIEANWNLVENAGSTNASICPRSITHTTWMALSPSSYALDHPTILVNRIRCDGAGSRRQLIFYSSSAYFRNLTPMTPETSKLPDRMRQIITAPGTNARIFSAIHATGEQFLIGYESTNRFCKGTTYFENGTTAYLARPFQPFTIPNVTTKFIPGSKYLLMVPFASRATCVYSAALNTTVQVPVTTSP-QTPEPEGEETLEPIDVASAQPAEGETESVEPDDEEDLLSGDGQTGTPSAEVGANPTPDGSATIIDDGSGQADGETTEEEGEPDGSAVETSPASTESEDDDDVCFPESASVTLLDGSSARMWQLEVGDEVLVGPNTYSRIFAFSHRDAHVKKLFYTLYTSSGHAISATQGHFI-YANNAAIPIERVQVGQSLRTITGSGVVVKVDRQWMKGLYNPQTVQGDIIVNGVVASTYTKSVVPAVAHAALAPLRAISTVCRVDMLGWLLESGVRQLPGRKWVR 497          
BLAST of Ggra9976.t1 vs. uniprot
Match: R7Q619 (HintN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q619_CHOCR)

HSP 1 Score: 125 bits (315), Expect = 1.360e-29
Identity = 73/159 (45.91%), Postives = 100/159 (62.89%), Query Frame = 0
Query:  287 DDHNGDDDDDACFPASARVSLRNGSTVRMCDLRVGDQVQVSRHAYSRVFAFSHRDARARATFYTLRTRSGLELSATKRHLIRAADRRLLRADGVRVGQLLRTVGGR-SAVVAIRTQRLQGLYNAHTTHGDIVVNGVLASTYTASVRPRVAHAALAPLRA 444
            DD   DDDD  CFPA+A V L NG+T  M  +++GD+V+V  + +S VF F+H+ A  + +F TL T+SG  LS TK H +   +  +  A  VR G  +    G  S+V  + T+  +GLYN  T HGDI+VNG+LA+TYT +V   +AHA LAPLRA
Sbjct:   58 DDEGEDDDDSVCFPANALVELENGATKMMSQVQLGDRVRVGPNDFSDVFMFTHKTAAIKYSFVTLATQSGHTLSLTKGHYL-YVNGVVAAAKTVRSGDFITLADGTTSSVTQVGTEIARGLYNPQTVHGDIIVNGLLATTYTTTVERSMAHALLAPLRA 215          
BLAST of Ggra9976.t1 vs. uniprot
Match: A0A1X6NXN0 (HintN domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NXN0_PORUM)

HSP 1 Score: 129 bits (325), Expect = 1.620e-28
Identity = 80/157 (50.96%), Postives = 95/157 (60.51%), Query Frame = 0
Query:  292 DDDDDACFPASARVSLRNGSTVRMCDLRVGDQVQVSRHAYSRVFAFSHRDARARATFYTLRTRSGLELSATKRHLIRAADRRLLRADGVRVGQLLRTVG-GRSAVVAIRTQRLQG--LYNAHTTHGDIVVNGVLASTYTASVRPRVAHAALAPLRAL 445
            D+DD  CFPA A V L +G TV M D+ +GD V+VS  AYS VF F+HR    R  F  L T +G  L+AT  H +  A+ RL  A  VRVG  L TVG   +  V   T R+ G  LYN  T HGDIVVNG+ ASTYT ++ P VA   LAPLRAL
Sbjct:  474 DEDDSVCFPADATVELADGRTVPMADVALGDHVRVSATAYSPVFLFTHRVRGGRRPFVRLTTAAGASLTATAGHYV-YANGRLTAAGAVRVGDRLETVGDAATCTVVTATARVAGTGLYNPQTLHGDIVVNGIRASTYTMAIEPAVASTLLAPLRAL 629          
BLAST of Ggra9976.t1 vs. uniprot
Match: A0A1X6P3R7 (HintN domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3R7_PORUM)

HSP 1 Score: 126 bits (317), Expect = 1.840e-27
Identity = 75/155 (48.39%), Postives = 93/155 (60.00%), Query Frame = 0
Query:  293 DDDDACFPASARVSLRNGSTVRMCDLRVGDQVQVSRHAYSRVFAFSHRDARARATFYTLRTRSGLELSATKRHLIRAADRRLLRADGVRVGQLLRTVGGRSAVVAIRTQRLQ--GLYNAHTTHGDIVVNGVLASTYTASVRPRVAHAALAPLRAL 445
            DDD  CFPASA V L  G TV M  L VGD V+V+  A+SRVF F+H+ A     F  L T SG  L+ T+ H +  A+ ++  A  V++G  L  VG     +   T  +   GLYN  T HGDIVVNG+ AST+T +V PRVA A LAPLRAL
Sbjct:  488 DDDSVCFPASAEVELDTGRTVTMDQLAVGDNVRVAADAFSRVFLFTHKIASGSFAFVKLTTASGASLTVTRSHYV-YANGKMTAAGAVKLGDKLELVGAAKCDIITATSPVTETGLYNPQTLHGDIVVNGIRASTFTTAVEPRVASALLAPLRAL 641          
BLAST of Ggra9976.t1 vs. uniprot
Match: A0A1X6P3Y5 (HintN domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3Y5_PORUM)

HSP 1 Score: 125 bits (314), Expect = 3.450e-27
Identity = 77/155 (49.68%), Postives = 92/155 (59.35%), Query Frame = 0
Query:  293 DDDDACFPASARVSLRNGSTVRMCDLRVGDQVQVSRHAYSRVFAFSHRDARARATFYTLRTRSGLELSATKRHLIRAADRRLLRADGVRVGQLLRTVGGRSA--VVAIRTQRLQGLYNAHTTHGDIVVNGVLASTYTASVRPRVAHAALAPLRAL 445
            DDD  CFPASA V L  G TV M  L VGD V+VS  A+SRVF F+H+ A     F  L T S   L+ T+ H +  A+ ++  A  V++G  L  VG      V AI      GLYN  T HGDIVVNG+ AST+T +V PRVA A LAPLRAL
Sbjct:  424 DDDSVCFPASAEVELDTGRTVTMDQLAVGDNVRVSADAFSRVFLFTHKIATGSFGFVKLTTASAASLTVTRSHYV-YANGKMTAAGAVKLGDKLELVGAAKCDIVTAISPITETGLYNPQTLHGDIVVNGIRASTFTTAVEPRVASALLAPLRAL 577          
BLAST of Ggra9976.t1 vs. uniprot
Match: R7Q8Q4 (HintN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8Q4_CHOCR)

HSP 1 Score: 119 bits (298), Expect = 2.530e-26
Identity = 67/148 (45.27%), Postives = 95/148 (64.19%), Query Frame = 0
Query:  298 CFPASARVSLRNGSTVRMCDLRVGDQVQVSRHAYSRVFAFSHRDARARATFYTLRTRSGLELSATKRHLIRAADRRLLRADGVRVGQLLRTVGGRSAVV-AIRTQRLQGLYNAHTTHGDIVVNGVLASTYTASVRPRVAHAALAPLRA 444
            CFPA A V+L++G    M  +R+GD+V V+   YS VFA++H  +++  ++  + T  G  L  T  H + A D   L+   VR G ++RT  G  A V A+RT + +GLYN  TTHGDIVVNG++A+TYT +V+P  AHA LAP+RA
Sbjct:  178 CFPADATVTLQSGQVKTMDTVRIGDRVLVADGTYSDVFAWTHHTSKSALSYIAVETDLGNRLVTTAGHYVHA-DGATLQMRDVRKGMVMRTAEGADATVTAVRTVKAKGLYNPQTTHGDIVVNGLIATTYTDAVQPGAAHALLAPVRA 324          
BLAST of Ggra9976.t1 vs. uniprot
Match: A0A2V3IE18 (Desert hedgehog protein A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE18_9FLOR)

HSP 1 Score: 120 bits (302), Expect = 4.900e-26
Identity = 67/149 (44.97%), Postives = 93/149 (62.42%), Query Frame = 0
Query:  296 DACFPASARVSLRNGSTVRMCDLRVGDQVQVSRH-AYSRVFAFSHRDARARATFYTLRTRSGLELSATKRHLIRAADRRLLRADGVRVGQLLRTVGGRSAVVAIRTQRLQGLYNAHTTHGDIVVNGVLASTYTASVRPRVAHAALAPLR 443
            + CFPASA V+  +GSTVRM DL  G  +Q   H A S VF F+HR  +    FY + T SG  +S T  H +   + RL+ A  V+VG ++RT+ G SAVV +   +  GLY  H+ HGD+VV+G++ S+Y+ +V P +AHA L PLR
Sbjct:  295 EVCFPASATVTTADGSTVRMADLEAGQHIQHDEHGASSPVFLFTHRTLKREQWFYRISTASGHAVSITGNHYL-YVNERLVAAHAVQVGNVVRTMSGPSAVVKVERVKDVGLYAPHSLHGDVVVDGIVCSSYSRAVAPGLAHALLLPLR 442          
BLAST of Ggra9976.t1 vs. uniprot
Match: A0A2V3IR48 (Protein hedgehog n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR48_9FLOR)

HSP 1 Score: 118 bits (295), Expect = 1.060e-24
Identity = 68/153 (44.44%), Postives = 90/153 (58.82%), Query Frame = 0
Query:  292 DDDDDACFPASARVSLRNGSTVRMCDLRVGDQVQVSRHAYSRVFAFSHRDARARATFYTLRTRSGLELSATKRHLIRAADRRLLRADGVRVGQLLRTVGGRSAVVA-IRTQRLQGLYNAHTTHGDIVVNGVLASTYTASVRPRVAHAALAPLR 443
            D+DD  CFP SA V L  G    + D+ +GD+V VS  AYS V+ F+HRD+     FY ++  SG  +S T  H I   D RL  A+ V VG +L    G   VV  I  Q ++GL+N HT  G IVV+G++AST+T +V P V  A LAP+R
Sbjct:  436 DEDDSVCFPESAHVELECGEVKAIGDISIGDRVLVSGRAYSEVYLFTHRDSNVLYNFYRIKVSSGAVISLTSTHYI-PVDGRLKTAESVHVGDVLTLGNGTFDVVTGIDRQHMRGLFNPHTLEGTIVVDGIVASTFTKTVMPSVGEALLAPIR 587          
BLAST of Ggra9976.t1 vs. uniprot
Match: A0A2V3IGP9 (Warthog protein 6 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGP9_9FLOR)

HSP 1 Score: 116 bits (291), Expect = 1.480e-24
Identity = 136/429 (31.70%), Postives = 187/429 (43.59%), Query Frame = 0
Query:   56 CPPSITHTSWMRLSASAVALPHSTLLMGRVRCDGLRSQPALRLY-----VSSQYAHDLSPLPGAHALPPRMRRLLLGVAPNIAARAALLEAREQFLMGFESSDRSCGGAALFGSGTTAFLFRPFAPLRIANLSTPFVPGAKYLLMIPPFKATTCVYSAS--------LRVPVEVPTTILPP----DSPQPT---------------------ADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK--AAEDNEGDDHNGDDDDDACFPASARVSLRNGSTVRMCDLRVGDQVQVSRHAYSRVFAFSHRDARARATFYTLRTRSGLELSATKRHLIRAADRRLLRADGVRVGQLLRTVGGRSAVVAIRTQRLQGLYNAHTTHGDIVVNGVLASTYTASVRPRVAHAALAPLRA 444
            C  ++    +   +    ++PH  +L     C G     +LR+      + S Y H                  +L + P  A   AL      F++G+E   R+CG AA        F+      +RI  L T F PGAKY+++      T C Y A            P  +P  +  P      P PT                     ADG     XXXXXXXXXXXXXXXXXXXXX                       + E ++ ++  G+DD  ACFPA A V L +GS   M  + +GD+V+V+   +S VF F+H+ A    +F  L   SG  L  TK H +   +  L  A+ V VG  + T  G  +V A+     +GLYN  T +G+IVVNGV ASTYT +V  + AH+ L PLRA
Sbjct:   47 CAQTVQFKDYTSEAPGVYSIPHDQILEDGTLCTG---DGSLRVVTKDKILGSGYGH------------------VLDMKPINAVVEALKNQGATFMLGYEKDGRTCGPAATPAKSVAIFVDEE-KNIRIPGLITLF-PGAKYIVVFDTSSPTPCTYFAKHEERVIGVAATPTPIPQVVTTPVPEHSEPYPTMEAEIPSGTEEAIQGTDSDGSADGGADATXXXXXXXXXXXXXXXXXXXXXSSTVDDGETAVDAVSGLEEEAQISPEGSDDEEEEGEDDGSACFPAHATVELEDGSFKTMDSIELGDRVKVASGEFSPVFMFTHKMAGISYSFVRLTASSGHSLELTKGHYL-YVNGDLAAAESVHVGDSIETDAGVVSVSAVARVVSRGLYNPQTVNGNIVVNGVRASTYTTAVEIKTAHSLLLPLRA 451          
BLAST of Ggra9976.t1 vs. uniprot
Match: A0A2V3IX71 (Indian hedgehog B protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX71_9FLOR)

HSP 1 Score: 109 bits (273), Expect = 3.560e-22
Identity = 69/155 (44.52%), Postives = 91/155 (58.71%), Query Frame = 0
Query:  292 DDDDDA-CFPASARVSLRNGSTVRMCDLRVGDQVQVSRHAYSRVFAFSHRDARARATFYTLRTRSGLELSATKRHLIRAADRRLLRADGVRVGQLLRTVGGR-SAVVAIRTQRLQGLYNAHTTHGDIVVNGVLASTYTASVRPRVAHAALAPLRA 444
            DDDDDA CFPA A V L +GS  +M D+++GD+V V    +S VF F+H+ +  R  F  ++T SG  LS T  H +   +  L  A  V+ G  L       + V  + T    GL+N  T HGDIVVNG+ ASTYT +V P +AHA L+PLRA
Sbjct:  303 DDDDDAVCFPADATVQLEDGSAKKMGDVQLGDRVMVDHGIFSPVFMFTHKLSTVRYGFVNIQTSSGNTLSLTPGHYL-YVNGHLSAASTVKNGDTLMLADSSLTDVTQVSTVTSTGLFNPQTLHGDIVVNGLKASTYTTAVEPGLAHALLSPLRA 456          
The following BLAST results are available for this feature:
BLAST of Ggra9976.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5K76.840e-10342.25Indian hedgehog B protein n=1 Tax=Gracilariopsis c... [more]
R7Q6191.360e-2945.91HintN domain-containing protein n=1 Tax=Chondrus c... [more]
A0A1X6NXN01.620e-2850.96HintN domain-containing protein n=1 Tax=Porphyra u... [more]
A0A1X6P3R71.840e-2748.39HintN domain-containing protein n=1 Tax=Porphyra u... [more]
A0A1X6P3Y53.450e-2749.68HintN domain-containing protein n=1 Tax=Porphyra u... [more]
R7Q8Q42.530e-2645.27HintN domain-containing protein n=1 Tax=Chondrus c... [more]
A0A2V3IE184.900e-2644.97Desert hedgehog protein A n=1 Tax=Gracilariopsis c... [more]
A0A2V3IR481.060e-2444.44Protein hedgehog n=1 Tax=Gracilariopsis chorda Tax... [more]
A0A2V3IGP91.480e-2431.70Warthog protein 6 n=1 Tax=Gracilariopsis chorda Ta... [more]
A0A2V3IX713.560e-2244.52Indian hedgehog B protein n=1 Tax=Gracilariopsis c... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003587Hint domain N-terminalSMARTSM00306hint_7coord: 296..390
e-value: 1.1E-11
score: 54.8
IPR001767Hedgehog protein, Hint domainPFAMPF01079Hintcoord: 297..450
e-value: 2.2E-29
score: 102.5
NoneNo IPR availableGENE3D2.170.16.10Hedgehog/Intein (Hint) domaincoord: 298..427
e-value: 2.6E-33
score: 117.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..297
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 256..278
NoneNo IPR availablePANTHERPTHR11889HEDGEHOGcoord: 291..448
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..482
NoneNo IPR availableCDDcd00081Hintcoord: 298..424
e-value: 2.62433E-15
score: 70.761
IPR006141Intein N-terminal splicing regionPROSITEPS50817INTEIN_N_TERcoord: 298..369
score: 8.554546
IPR036844Hint domain superfamilySUPERFAMILY51294Hedgehog/intein (Hint) domaincoord: 298..426

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000213_piloncontigtig00000213_pilon:80840..82288 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9976.t1Ggra9976.t1Gracilaria gracilis GNS1m malemRNAtig00000213_pilon 80840..82288 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9976.t1 ID=Ggra9976.t1|Name=Ggra9976.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=483bp
MRHARALGAALALLLQLAQLARADTAPTAARFATAADAEASWRVVERAGA
GADRACPPSITHTSWMRLSASAVALPHSTLLMGRVRCDGLRSQPALRLYV
SSQYAHDLSPLPGAHALPPRMRRLLLGVAPNIAARAALLEAREQFLMGFE
SSDRSCGGAALFGSGTTAFLFRPFAPLRIANLSTPFVPGAKYLLMIPPFK
ATTCVYSASLRVPVEVPTTILPPDSPQPTADGDGDGDGDGNGDGDGDGNG
NGDGNGDGNGDGNGNGNGNGNGNGNGNGKAAEDNEGDDHNGDDDDDACFP
ASARVSLRNGSTVRMCDLRVGDQVQVSRHAYSRVFAFSHRDARARATFYT
LRTRSGLELSATKRHLIRAADRRLLRADGVRVGQLLRTVGGRSAVVAIRT
QRLQGLYNAHTTHGDIVVNGVLASTYTASVRPRVAHAALAPLRALSALCQ
ADALSPLLAARLHKLPARAWLRAVYVYTYQGW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003587Hint_dom_N
IPR001767Hedgehog_Hint
IPR006141Intein_N
IPR036844Hint_dom_sf