Ggra9957.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9957.t1
Unique NameGgra9957.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length889
Homology
BLAST of Ggra9957.t1 vs. uniprot
Match: A0A2V3IVP2 (Enhancer of polycomb-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVP2_9FLOR)

HSP 1 Score: 387 bits (994), Expect = 1.770e-118
Identity = 206/307 (67.10%), Postives = 244/307 (79.48%), Query Frame = 0
Query:  576 SVFGANAKAATADIPVPIVNRVEPPAIHASFARLEQYILFDRDDLDLIDDIVDYDADFVDEQFARDNNVHLDLLERAMDSLEKAQARSESPNLLSFSAIKSLL---ASNDIVTKPLYHHWLRRHQSRTISFLRIFQPPPDPKNHDPAVAFRPRERDAASGIARFMNTYDNFRKALVWRDELQQLHQILQRVVHRENKKAQVLALKMLAQRLRATADGGLRMDAVNRAAFSCDTEPIVTYGSSASPVSVVVVPVRGLNLPDSINVVSRKMGGDKMAKKNRRKAKMPEKSGQKKGSPSPSVDIHALASS 879
            SVFGANA+AATADIPVPIVN V PP +  +F     YILFDRDDLDLID IVDYDADFVD+QFA  + + LDLLER MD++EK QARS+S +LLS+SA KS L   A +D + K LYHHWLRR ++    FLRIFQPPPDPKN DPAVAFRPRERDAASGIAR MNTYDNFRKA+  RDEL+QL QIL+RV+ RE KK+Q+L LKM AQRL ATADG  RM+ VNRAAF+CDTEP+V Y S+  P + V+VPVRGL LPDSINVVS+K+  DK  KK+RR+AK  ++ G K+GSPS S D+ AL+++
Sbjct:  159 SVFGANAQAATADIPVPIVNPVTPPPLQGAFRLPPNYILFDRDDLDLIDHIVDYDADFVDDQFAAQHAIDLDLLERCMDTMEKTQARSDSNSLLSYSAHKSALSQTAPSDAIAKLLYHHWLRRRENHPTPFLRIFQPPPDPKNQDPAVAFRPRERDAASGIARRMNTYDNFRKAVALRDELRQLRQILRRVLQREKKKSQLLMLKMFAQRLHATADGAPRMETVNRAAFTCDTEPVVIYASNLRPSAAVLVPVRGLTLPDSINVVSKKIDVDKNPKKSRRRAKPTDRRGLKEGSPSSSNDLRALSNA 465          
BLAST of Ggra9957.t1 vs. uniprot
Match: S0F329 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F329_CHOCR)

HSP 1 Score: 202 bits (515), Expect = 3.170e-52
Identity = 121/260 (46.54%), Postives = 172/260 (66.15%), Query Frame = 0
Query:  614 LFDRDDLDLIDDIVDYDADFVDEQF------ARDNN--VHLDLLERAMDSLEKAQARSESPN-LLSFSAIKSLLASNDIV-------TKPLYHHWLRRHQSRTISFLRIFQPPPDPKNHDPAVAFRPRERDAASGIARFMNTYDNFRKALVWRDELQQLHQILQRVVHRENKKAQVLALKMLAQRLRATADGGLRMDAVNRAAFSCDTEPIVTYGSSASPVSVVVVPVRGLNLPDSINVVSRKMGG---DKMAKKNRRKA 854
            +FD+ D DL D  VDYDAD VD+ F      A+ NN  + LD+LERAMD++EKAQ RSE+ + L+ ++ ++  LA  ++         + L+ HW +R   R   FLR++Q  PDP N+DPAVAFRPR++D  +G  R MNTYDNFR+A++ RDEL+ L  ++ R+V RE +KAQ+L L++L QR+  T+ GG R+++VNRA FS + EP+V YG +   V   +VP R L LP  I+VV R++G    +K AKK RR+A
Sbjct:    1 MFDKSDHDLEDACVDYDADHVDKAFVTAINKAKPNNTPLTLDVLERAMDAMEKAQGRSEAGDGLVPYATVRQTLALVEMAGGHPESTRRELHSHWHKRRTERGFPFLRLYQQAPDPSNNDPAVAFRPRDKDNLAGAGRRMNTYDNFRRAVILRDELKTLINVMDRIVDRETQKAQLLGLRLLQQRVALTSAGGPRIESVNRAMFSGEQEPVVIYGPTQMQV---LVPCRNLRLPPEIDVVLRRLGSTAAEKAAKKARRRA 257          
BLAST of Ggra9957.t1 vs. uniprot
Match: A0A5J4YLI9 (Enhancer of polycomb-like protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YLI9_PORPP)

HSP 1 Score: 97.1 bits (240), Expect = 4.250e-17
Identity = 69/205 (33.66%), Postives = 111/205 (54.15%), Query Frame = 0
Query:  576 SVFGANAKAATADIPVPIVNRVEPPAIH--ASFARLEQYILFDRDDLDLIDDIVDYDADFVDEQFA-RDNNVHLDLLERAMDSLEKAQARSESPNLLSFSAIKSLLASNDIVTKP----LYHHWLRRHQSRTIS--FLRIFQPPPDPKNHDPAVAFRPRERDAASGIARFM-NTYDNFRKALVWRDELQQLHQILQRVVHRENKK 770
            S+ G + ++ T DIP+P+V+ + P        F     YI  D  D + +   VDY+AD  DE +  + + + +D  E A+D LEK Q     P L+ ++   +  A   + ++P    ++++WL + QSR  S   LR FQPPPDP + +PAVAFRP ++D  +   R   NTY+N+RK L+   +L ++  +L  +  RE  K
Sbjct:   45 SILGQD-RSKTIDIPIPVVSELPPEQQLKLVPFKNPSSYIKLDLTDAEFLAMSVDYEADAQDEAWLNQQSGIDIDTFECAIDKLEKVQGFR--PELIPYAGSNAQEALRMLDSEPKRKQVFNYWLAKRQSREGSRPLLRHFQPPPDPDDPNPAVAFRPVQKDQTANRNRARSNTYENYRKVLLLYQDLVKVRGVLDEIAKRERIK 246          
The following BLAST results are available for this feature:
BLAST of Ggra9957.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IVP21.770e-11867.10Enhancer of polycomb-like n=1 Tax=Gracilariopsis c... [more]
S0F3293.170e-5246.54Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4YLI94.250e-1733.66Enhancer of polycomb-like protein n=1 Tax=Porphyri... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 488..508
NoneNo IPR availableCOILSCoilCoilcoord: 6..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 487..507
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 307..321
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 326..343
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 296..343
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..159
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 486..511
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 840..875
IPR024943Enhancer of polycomb proteinPANTHERPTHR14898ENHANCER OF POLYCOMBcoord: 514..865

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000887_piloncontigtig00000887_pilon:369280..376123 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9957.t1Ggra9957.t1Gracilaria gracilis GNS1m malemRNAtig00000887_pilon 369280..376123 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9957.t1 ID=Ggra9957.t1|Name=Ggra9957.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=889bp
MESHPSDSVSDQFDKVKKAVDDLQNQIRLSKINTKKRFGKLKRMLQYMEV
EIISPETEMGSTLPEADILNALNQMICDGFKVIGVNMLLDKALANSIKAK
TETNEVKTLEDLCRKTISEFQDPSLSYIQFMSTQEDSSESSAVQHSPPPP
DHVPTSDIAANQQRVVHQLPRVHSSRSNMSKLSSMPSFGNMVEPLSDSSV
SLYDDHGAAAAAAAAAAAAPGLNAHAAAARITPAEYEEFGPEASITNVYD
DVKEHFDDEVTPSTLFRQIAPSIRMAHHIHPFRPAQHQHHVEHVEHAQHE
HHLHQHPPLSPSQQIGNMRGETGKITTPPPLPPPPPPPPPLLTAVRSYAE
KHSIPPAPNVAFASRQLYGNGLFCSASCRGRMGALKRWSMTGRDGHMQKS
RSSIGTESEMKATLMSTTDPADTGAGETVSGAVPNEGVFAGKASEVALLM
KGEREQQVCLGELKQYDPVRDMHWLQIGGGEEAAVAHEEDAQEETDEEEE
DDEEAAERVTSEATLPPFVADLGRPPLLLAASRDKRSGASDEERNMASYQ
AAERQQATIQVLPLNDVSSRTRRQLSVFGANAKAATADIPVPIVNRVEPP
AIHASFARLEQYILFDRDDLDLIDDIVDYDADFVDEQFARDNNVHLDLLE
RAMDSLEKAQARSESPNLLSFSAIKSLLASNDIVTKPLYHHWLRRHQSRT
ISFLRIFQPPPDPKNHDPAVAFRPRERDAASGIARFMNTYDNFRKALVWR
DELQQLHQILQRVVHRENKKAQVLALKMLAQRLRATADGGLRMDAVNRAA
FSCDTEPIVTYGSSASPVSVVVVPVRGLNLPDSINVVSRKMGGDKMAKKN
RRKAKMPEKSGQKKGSPSPSVDIHALASSPFKRRQVWI*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024943Enhancer_polycomb