Ggra9940.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9940.t1
Unique NameGgra9940.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length320
Homology
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BLAST of Ggra9940.t1 vs. uniprot
Match: A0A2V3J1L8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1L8_9FLOR)

HSP 1 Score: 197 bits (500), Expect = 1.420e-57
Identity = 116/309 (37.54%), Postives = 168/309 (54.37%), Query Frame = 0 
Query:   14 ISFLSFDHGGTLQWYVTVPHNVADDFIFEKVRMFLASVSMSSAVFKPYDTDPFVDSEPDSTNAMSRATYINGADNTMMVAKQIEQGSNEWHGFVVRPSSVVSEQIIISMVDAFEEAAEYLVGNLADKRMKFRGLSENIRRLYSSDNWWRKKSLFIHLRDSLVSLGKSHCRLGLRCLEREESGLQARLPGTTTLSKF---RSTLLRWYSCVP-SIWVTCLTRKAMYYDNMTIGHSETLLWYYVSVFSIGNRERRHYYVEAAIDETVRLWFRHRDWVTTIQFTANKSFPSAVPRSVRHAADELMEELSESY 318
            I+F+ F     L W   +P++V++  + + VR F+ASV MS+A+FKPY   PF D+  D      R+  +N  D ++ VAKQ EQ +NEWHG ++ P S    ++  S++ A E+ A+  + + A    K   L   IR LY++DNWWR +SLF+HLRD LV LG+   R     ++R        +P T  LS+    + +L+    C   S+ V   T + +  DN+T   +  L WYY  VFSIGNR RR YY E A + TVRLWF+  +W T  Q   N+      P  +  AA +LME L+  Y
Sbjct:    4 IAFVKFSDTPQLIWNECIPYSVSEHLLHQYVRRFIASVDMSTAIFKPYHLHPF-DNSHDRVPIAPRSNVVNFEDGSLFVAKQSEQNANEWHGILLNPRSKDDAEMDGSIIVALEQVAKSTILSSACISSKLHRLCSVIRSLYATDNWWRAQSLFLHLRDGLVELGRMSTRDDDEHMKRP-----FYVPNTAPLSRLQVLKHSLMHSLPCKNLSVCVFSPTSEIVLNDNLTNAETNMLCWYYKWVFSIGNRTRRRYYFETASETTVRLWFQTNEWRTVAQVEVNEISSPISPWPMLQAARDLMETLASEY 306
The following BLAST results are available for this feature:
BLAST of Ggra9940.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J1L81.420e-5737.54Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000887_piloncontigtig00000887_pilon:204679..205638 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9940.t1Ggra9940.t1Gracilaria gracilis GNS1m malemRNAtig00000887_pilon 204679..205638 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9940.t1 ID=Ggra9940.t1|Name=Ggra9940.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=320bp
MNRTDSMIEEQECISFLSFDHGGTLQWYVTVPHNVADDFIFEKVRMFLAS
VSMSSAVFKPYDTDPFVDSEPDSTNAMSRATYINGADNTMMVAKQIEQGS
NEWHGFVVRPSSVVSEQIIISMVDAFEEAAEYLVGNLADKRMKFRGLSEN
IRRLYSSDNWWRKKSLFIHLRDSLVSLGKSHCRLGLRCLEREESGLQARL
PGTTTLSKFRSTLLRWYSCVPSIWVTCLTRKAMYYDNMTIGHSETLLWYY
VSVFSIGNRERRHYYVEAAIDETVRLWFRHRDWVTTIQFTANKSFPSAVP
RSVRHAADELMEELSESYR*
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