Ggra9938.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9938.t1
Unique NameGgra9938.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length499
Homology
BLAST of Ggra9938.t1 vs. uniprot
Match: A0A2V3J1K8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1K8_9FLOR)

HSP 1 Score: 481 bits (1239), Expect = 8.060e-164
Identity = 278/489 (56.85%), Postives = 358/489 (73.21%), Query Frame = 0
Query:    1 MASTIALRMPPELAASTALATSSVDSKAPLWVTKDVINPIHLSNFEHAVARRRRRIFRIPDMGGPIANWLYTRPEPEAISEDAFQNSAIESTSLFRMEGLSHDGTSITITPSLSSHWLMVPVQSMNGFTLGLAFLDILFQRDTGNNTIPPLPVGRFVVEDATGEVFVTGWXXXXXXXXXXXXXXXXERVRELLLYKAPPVNGVKPTQLLLRNSFFERRACHLCGQGRTFSSLPNPCSGVNKRGSAMLPTMDK-VTNVSSVYRRFRGAYFGVCVKTSF-LGDQPTREVQPVFIDIRHGLLSVKRRLHNSLRKNVAFEIP-INSYFGMHPASS-KKMLLFKPEPVEAGYPLIAMPEDEEEKSGSEENSDTSYPN---ALSPQSIQRDNVSASSDSNSTNGQGPRRRRRVDDEVGRMSAAHRRRVRNRESAQRSNLRRKERLARERHELSHYKSLIPILQQKYEDLMNEQMSLLIDASVKGKHDDVEQIINR 482
            M+S + LRMPP LAA+TALATSSVDS AP WV+ D+INP HL +FE++V R    IFRIP+MGGPIA+W+YTRP  EAISE +F+ SAIESTS+FR+EG + +  S+ ITPSLSSHWLMVP QS+NGFTLGLAFLDI++QR    N IPPLPVGRFV+EDATGEVFVTGW XXXXXXXXXX     ER RELLLY+AP  +G +PTQL +RNSF+ERR+CHLCG  +T SSLP+PCS +N R S   PT D+ +TNV+SVYRRFRGAYFG+CVK  +  G   ++EVQP+FIDIRHGL +VKRR  + L  NV F +  +NS    HP ++  KML F P PV+AGYPLIA+PE   E++ +  +++T++P    + SP SI++   +A+  S        R+R+RVDD+V R S+ H+R+VRNR SAQRSNLRR+ +L ++R +L  +K  +P L+ K + L+ E   L I A + G   + E I ++
Sbjct:    1 MSSDLPLRMPPHLAATTALATSSVDSAAPAWVSHDLINPYHLHDFENSVDRHPSTIFRIPNMGGPIADWVYTRPTMEAISEHSFRCSAIESTSVFRIEGFTDNHNSVKITPSLSSHWLMVPCQSINGFTLGLAFLDIIYQRKNPGNAIPPLPVGRFVIEDATGEVFVTGWTXXXXXXXXXXSVIKCERKRELLLYRAPSESGKRPTQLFMRNSFYERRSCHLCGNTQTISSLPSPCSAINARMSTC-PTGDQQLTNVASVYRRFRGAYFGLCVKMLYRAGRMCSKEVQPLFIDIRHGLPAVKRRFRSRLHNNVLFAVDAVNSLSATHPTTAPSKMLFFMPNPVKAGYPLIALPE---EQADNTHHTNTAFPKLRRSASPNSIRQH--AAADTSQLPANHLTRQRQRVDDDVHRSSSHHQRKVRNRASAQRSNLRRRLKLQKDRQDLDLFKGQLPTLRAKQQALLLENRRLRISAFLMGLQYEAELIASQ 483          
BLAST of Ggra9938.t1 vs. uniprot
Match: R7QLX4 (BZIP domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLX4_CHOCR)

HSP 1 Score: 312 bits (799), Expect = 2.440e-97
Identity = 184/436 (42.20%), Postives = 266/436 (61.01%), Query Frame = 0
Query:    3 STIALRMPPELAASTALATSSVDSKAPLWVTKDVINPIHLSNFEHAV-ARRRRRIFRIPDMGGPIANWLYTRPEPEAISEDAFQNSAIESTSLFRMEGLSHDGTSITITPSLSSHWLMVPVQSMNGFTLGLAFLDILFQRDTGNNTIPPLPVGRFVVEDATGEVFVTGWXXXXXXXXXXXXXXXXERVRELLLYKAPPVNGVKPTQLLLRNSFFERRACHLCGQGRTFSSLPNPCSGVNK--RGSAMLPTMDKVTNVSSVYRRFRGAYFGVCVKTSFLGDQPTREVQ-PVFIDIRHGLLSVKRRLHNSLRKNV--AFEIPI-NSYFGMHPASSKKMLLFKP-EPVEAGYPLIAMPEDEEEKSGSEENSDTS-YPNALSPQSIQRDN---VSASSDSNSTNGQGPRRRRRVD-DEVGRMSAAHRRRVRNRESAQRSN 425
            ST  LRMPP L  +  LAT  VD+ AP W        +          +R  R IFR+P+    + +WLY+RP  EA+  DAF+N+AIES+++FRM  +     SI I+P++SSHWLMVP QS+NG T+GL +LD+L++R      +PPLPVG+F +EDATGEVFVT W                ERVRELL+++ PP +   PT+LL RNSF+ERRACHLCG G   S LP PC+GV    R +  L     +TN++++YRRFRGAYFGVC+KTS+  ++ T +V+ PVF D+R  L  V+ R   +LRKNV  +F+ P+ N+ FG+ P SS ++ +    +PV +    +A+ +  + K    +N  T+   +  SP SI  D+   +++S  S S + +    RRR   D++ R + A +R+ RNR++A++SN
Sbjct:    2 STTHLRMPPHLQRTAPLATLVVDADAPSWAVCRTGLTLDRGTIPAMFNSRSDRTIFRLPESNRAVRDWLYSRPFVEALGNDAFENAAIESSTIFRMHPIDPHDPSIKISPTVSSHWLMVPFQSINGVTIGLVYLDVLYERPEEELRVPPLPVGKFAIEDATGEVFVTAWGDDIMIIGWIQSIIKCERVRELLMFRPPPHDAQPPTELLRRNSFYERRACHLCGHGDHISGLPEPCTGVGPVARPAPFLGGPMPLTNIATLYRRFRGAYFGVCIKTSYANNRMTDQVRVPVFCDVRKSLSPVRERFKINLRKNVQFSFDSPLTNTLFGLSPRSSSRLFILNSNKPVSSS---LAIMDSSKRKRRRRDNCSTADRMDVCSPMSIVGDHDGSIASSEHSESPSSRPSHTRRRAGIDDMDRGTTAFQRKQRNRQAAEKSN 434          
BLAST of Ggra9938.t1 vs. uniprot
Match: A0A1X6PD36 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PD36_PORUM)

HSP 1 Score: 108 bits (269), Expect = 3.870e-21
Identity = 76/242 (31.40%), Postives = 110/242 (45.45%), Query Frame = 0
Query:   51 RRRRRIFRIPDMGGPIANWLYTRPE-PEAISEDAFQNSAIESTSLFRMEGLSHDGTSITIT---PSLSSHWLMVPVQSMNGFTLGLAFLDILFQRDTGNNTIPPLPVGRFVVEDATGEVFVTGWXXXXXXXXXXXXXXXX--ERVRELLLYKAPPVNGVKPTQLLLRNSFFERRACHLCGQGR------TFSSLPNPCSGVNKRGSAMLPTMDKVTNVSSV----YRRFRGAYFGVCVKTSF 276
            R  RRIFR+P     +  WL+T     EA+   + + +A E+  ++R       G  + +    P L+ +WL++PV S+NG T+GL + ++  +       I P P GRF +++A GE+F T W                  ERVRE L + AP   G  P  +L R +F+ERR C LCG           S+LP PC     R          VT+        +  FRG YFG  V + F
Sbjct:   25 RSFRRIFRLPLASPWLHRWLFTPASVAEAVPAASLRAAATEAAEVYRKPSGVPPGVPLPLDGMEPKLALNWLLLPVSSVNGMTVGLVWTEVT-KNSLDAAVIAPAPSGRFALDEAAGELFATAWRPADATLIVAWTASVLSCERVRETLHFDAP-APGTLPAHILTRMAFYERRHCRLCGPASGPGVVPDLSALPPPCVAYPAR---------HVTSPGDFMGFGFPTFRGTYFGTVVISRF 255          
The following BLAST results are available for this feature:
BLAST of Ggra9938.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J1K88.060e-16456.85Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QLX42.440e-9742.20BZIP domain-containing protein n=1 Tax=Chondrus cr... [more]
A0A1X6PD363.870e-2131.40Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 392..410
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 361..391
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 344..424
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..498
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..26
NoneNo IPR availableCDDcd14686bZIPcoord: 410..459
e-value: 1.66714E-9
score: 51.3921

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000887_piloncontigtig00000887_pilon:140395..141891 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9938.t1Ggra9938.t1Gracilaria gracilis GNS1m malemRNAtig00000887_pilon 140395..141891 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9938.t1 ID=Ggra9938.t1|Name=Ggra9938.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=499bp
MASTIALRMPPELAASTALATSSVDSKAPLWVTKDVINPIHLSNFEHAVA
RRRRRIFRIPDMGGPIANWLYTRPEPEAISEDAFQNSAIESTSLFRMEGL
SHDGTSITITPSLSSHWLMVPVQSMNGFTLGLAFLDILFQRDTGNNTIPP
LPVGRFVVEDATGEVFVTGWTADIMICGWIQSVIKCERVRELLLYKAPPV
NGVKPTQLLLRNSFFERRACHLCGQGRTFSSLPNPCSGVNKRGSAMLPTM
DKVTNVSSVYRRFRGAYFGVCVKTSFLGDQPTREVQPVFIDIRHGLLSVK
RRLHNSLRKNVAFEIPINSYFGMHPASSKKMLLFKPEPVEAGYPLIAMPE
DEEEKSGSEENSDTSYPNALSPQSIQRDNVSASSDSNSTNGQGPRRRRRV
DDEVGRMSAAHRRRVRNRESAQRSNLRRKERLARERHELSHYKSLIPILQ
QKYEDLMNEQMSLLIDASVKGKHDDVEQIINRKGLDVATRQTLLRDCQ*
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