Ggra9935.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9935.t1
Unique NameGgra9935.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length157
Homology
BLAST of Ggra9935.t1 vs. uniprot
Match: A0A2V3J1P7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1P7_9FLOR)

HSP 1 Score: 311 bits (796), Expect = 3.510e-107
Identity = 141/156 (90.38%), Postives = 148/156 (94.87%), Query Frame = 0
Query:    1 MQAGHGSQPDDVGVEWLNAPAAWAFYLSIIATVRLLAGLFPGCTPFHAWTVVNVLHAVITFYIFHWLKGSPFPTYWAIGTPSNDKRTWWEQLDHRWQNTPSRKFCTAIVCLLYFCAALTTPPHRAFYHFVNLVAFVVVFVAKLPAMDSVRILGINR 156
            MQAGHGSQPDDVGVEWLNAPAAWAFYL IIATVRLLAGLFPGC PFHAWT+VNVLHAVITFYIFHWLKGSPFPTYWA+ TPSNDKRTWWEQLDHRWQNTPSRKFCTA+VCLLYFCAA+TTPP   FYH +N VAFV+VF+AKLPAMDSVRILGINR
Sbjct:    1 MQAGHGSQPDDVGVEWLNAPAAWAFYLFIIATVRLLAGLFPGCNPFHAWTIVNVLHAVITFYIFHWLKGSPFPTYWAVCTPSNDKRTWWEQLDHRWQNTPSRKFCTAVVCLLYFCAAITTPPQHPFYHSINFVAFVIVFIAKLPAMDSVRILGINR 156          
BLAST of Ggra9935.t1 vs. uniprot
Match: R7QQ88 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQ88_CHOCR)

HSP 1 Score: 273 bits (697), Expect = 4.380e-92
Identity = 125/156 (80.13%), Postives = 135/156 (86.54%), Query Frame = 0
Query:    1 MQAGHGSQPDDVGVEWLNAPAAWAFYLSIIATVRLLAGLFPGCTPFHAWTVVNVLHAVITFYIFHWLKGSPFPTYWAIGTPSNDKRTWWEQLDHRWQNTPSRKFCTAIVCLLYFCAALTTPPHRAFYHFVNLVAFVVVFVAKLPAMDSVRILGINR 156
            MQAGHGSQPDDVGVEWLNAPAAWAFYL I+ATVR L GL+PG   F AWT VNV HAVITFYIFHW+KG+PFPTYWA   PSND+RTWWEQLDHRWQNTPSRKFCTA+VC+LY  A  TTPP    YHF+N VAFVV+F+AKLPAMDSVRILGINR
Sbjct:    1 MQAGHGSQPDDVGVEWLNAPAAWAFYLGIVATVRFLIGLYPGLRDFQAWTFVNVTHAVITFYIFHWVKGNPFPTYWAASMPSNDRRTWWEQLDHRWQNTPSRKFCTAVVCVLYLFAVQTTPPAFHTYHFINFVAFVVLFIAKLPAMDSVRILGINR 156          
BLAST of Ggra9935.t1 vs. uniprot
Match: A0A1X6NK64 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NK64_PORUM)

HSP 1 Score: 192 bits (488), Expect = 2.990e-60
Identity = 89/156 (57.05%), Postives = 107/156 (68.59%), Query Frame = 0
Query:    1 MQAGHGSQPDDVGVEWLNAPAAWAFYLSIIATVRLLAGLFPGCTPFHAWTVVNVLHAVITFYIFHWLKGSPFPTYWAIGTPSNDKRTWWEQLDHRWQNTPSRKFCTAIVCLLYFCAALTTPPHRAFYHFVNLVAFVVVFVAKLPAMDSVRILGINR 156
            MQAGHGS P DVGV WL+   +W FY+ ++  VR + GL PG  P  AW+ +N+ HA +TF  FHWLKG+PFPTYW++     D  TWWEQLD RWQ TP+RKFC A+V +L+  A   TP     +HF N VAF VVFVAKLP MD VRI GINR
Sbjct:    1 MQAGHGSAPGDVGVSWLHGKGSWLFYIGLLGAVRYVLGLVPGLPPHVAWSGLNIGHAALTFVTFHWLKGNPFPTYWSLTPAGVDACTWWEQLDRRWQQTPARKFCVAVVLVLWVLAVEATPAAAWGWHFANAVAFAVVFVAKLPFMDRVRIFGINR 156          
BLAST of Ggra9935.t1 vs. uniprot
Match: A0A6T6BZK5 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6BZK5_9RHOD)

HSP 1 Score: 191 bits (484), Expect = 3.970e-59
Identity = 86/160 (53.75%), Postives = 115/160 (71.88%), Query Frame = 0
Query:    1 MQAGHGSQPDDVGVEWLNAPAAWAFYLSIIATVRLLAG----LFPGCTPFHAWTVVNVLHAVITFYIFHWLKGSPFPTYWAIGTPSNDKRTWWEQLDHRWQNTPSRKFCTAIVCLLYFCAALTTPPHRAFYHFVNLVAFVVVFVAKLPAMDSVRILGINR 156
            M+AGH S P DVGVEWLN+  +WAFYL+++   R L      ++PG  P  AW++VN+ H+++TF+ FHW+KG+PFPT++++ +P  DK TWWEQ+DHRWQNTPSRKFC  +V +LY  A  ++P       F NL+AF V FVAK PAMD VRI GIN+
Sbjct:   34 MEAGHASMPADVGVEWLNSKGSWAFYLAVLVFARALVAAVLTIWPGGDPTLAWSIVNIGHSLVTFFAFHWVKGNPFPTFFSMTSPEVDKYTWWEQIDHRWQNTPSRKFCRVVVVVLYLLALDSSPWDLVKLQFANLIAFTVAFVAKFPAMDGVRIFGINK 193          
BLAST of Ggra9935.t1 vs. uniprot
Match: M2VW06 (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VW06_GALSU)

HSP 1 Score: 184 bits (466), Expect = 6.420e-57
Identity = 84/156 (53.85%), Postives = 110/156 (70.51%), Query Frame = 0
Query:    1 MQAGHGSQPDDVGVEWLNAPAAWAFYLSIIATVRLLAGLFPGCTPFHAWTVVNVLHAVITFYIFHWLKGSPFPTYWAIGTPSNDKRTWWEQLDHRWQNTPSRKFCTAIVCLLYFCAALTTPPHRAFYHFVNLVAFVVVFVAKLPAMDSVRILGINR 156
            MQAGHGS P DVGVEWL A  AW+FY+ +I TVR++ G      P+ +W+ +N+LHA +TF++FHW+KGSPFPT W     + DK TWWEQ+D + QNTP+RKF TA+V +LY  A  +TP      H  N VAF++VF+AK+P M  VRI GIN+
Sbjct:    1 MQAGHGSAPVDVGVEWLRAKGAWSFYILLIITVRVIIGTILDLEPYQSWSTINILHATVTFFVFHWIKGSPFPTNWTEDY-NVDKYTWWEQIDRKRQNTPNRKFFTAVVIVLYLLALDSTPKEYVAVHIANFVAFIIVFIAKMPWMHKVRIFGINK 155          
BLAST of Ggra9935.t1 vs. uniprot
Match: M1UVF7 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1UVF7_CYAM1)

HSP 1 Score: 173 bits (438), Expect = 1.270e-52
Identity = 83/158 (52.53%), Postives = 107/158 (67.72%), Query Frame = 0
Query:    1 MQAGHGSQPDDVGVEWLNAPAAWAFYLSIIATVRLLAGLFPGCTPFHAWTVVNVLHAVITFYIFHWLKGSPFPTYWAIGTPSNDKRTWWEQLDHRWQNTPSRKFCTAIVCLLYFCAALTTPPHRAFY--HFVNLVAFVVVFVAKLPAMDSVRILGINR 156
            MQ+GHG    DVGVEWL A  +W FY+ ++A+ R+  GL    +P  +WT++NV+HA +TF +FHW+KG+PF T W       +K+TWWEQ+D   QNTPSRKF   +V  LY  A  +TP  R F+  H VNL+AF+VVFVAKLP M  VRI GINR
Sbjct:    1 MQSGHGETRFDVGVEWLRAKGSWTFYIMLLASFRIFFGLGLSLSPMESWTIMNVVHAGVTFIVFHWIKGNPFHTPWVDMMGKGEKQTWWEQIDGSVQNTPSRKFLICVVVFLYLAAVHSTPFERQFFFVHAVNLIAFLVVFVAKLPFMHGVRIFGINR 158          
BLAST of Ggra9935.t1 vs. uniprot
Match: A0A7S1ETC9 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ETC9_9RHOD)

HSP 1 Score: 154 bits (390), Expect = 1.610e-45
Identity = 79/147 (53.74%), Postives = 95/147 (64.63%), Query Frame = 0
Query:   12 VGVEWLNAPAAWAFYLSIIATVRLLAGLFPGCTPFHAWTVVNVLHAVITFYIFHWLKGSPFPTYWAIGTPSNDKRTWWEQLDHRWQNTPSRKFCTAIVCLLYFCAALTTPPHRA--FYHFVNLVAFVVVFVAKLPAMDSVRILGINR 156
            VGVEWL     W FY+ ++ + RLL G   G   + AWT VNV HAV+TF+ FHW+KGSPF T W       D  TWWEQLD R Q TP+RKFC  +V  L+  A  TTP  R   F H +NL+AFVV+ +AKLPAMD VRI GIN+
Sbjct:    1 VGVEWLGFKGTWTFYIVVLLSARLLLGTVLGLESYLAWTFVNVGHAVVTFFAFHWIKGSPFVTMW---NQDWDSLTWWEQLDFRKQATPNRKFCMVVVFSLFLMAYETTPFDRTYLFIHLINLIAFVVMVIAKLPAMDKVRIFGINK 144          
BLAST of Ggra9935.t1 vs. uniprot
Match: A0A5J4Z643 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z643_PORPP)

HSP 1 Score: 151 bits (381), Expect = 5.080e-44
Identity = 80/158 (50.63%), Postives = 98/158 (62.03%), Query Frame = 0
Query:    1 MQAGHGSQPDDVGVEWLNAPAAWAFYLSIIATVRLLAGLFPGCTPFHAWTVVNVLHAVITFYIFHWLKGSPFPTYWAIGTPSNDKRTWWEQLDHRWQNTPSRKFCTAIVCLLYFCAALTTPPHRAF--YHFVNLVAFVVVFVAKLPAMDSVRILGINR 156
            MQ G G  P  VGVEW +    W FY S++ T R+L G      P+ +WT+VNV+HA ITF  FHW+KGSPF T W    P +D+ TWWEQLD R Q TP+RKFC A+V  L+      TP  + F   H +N V  VV+ VAKLP MD VRI GIN+
Sbjct:    1 MQCGDGP-PALVGVEWFSHKGVWLFYGSLVLTGRILLGTLLQTEPYVSWTIVNVVHACITFVTFHWIKGSPFETMWF---PGSDRLTWWEQLDMRKQATPNRKFCVAMVIFLFLVCYEATPLEKRFALLHALNFVVAVVMIVAKLPVMDKVRIFGINK 154          
BLAST of Ggra9935.t1 vs. uniprot
Match: A0A7J7IQ67 (S n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IQ67_9RHOD)

HSP 1 Score: 129 bits (324), Expect = 1.850e-35
Identity = 65/125 (52.00%), Postives = 80/125 (64.00%), Query Frame = 0
Query:   34 RLLAGLFPGCTPFHAWTVVNVLHAVITFYIFHWLKGSPFPTYWAIGTPSNDKRTWWEQLDHRWQNTPSRKFCTAIVCLLYFCAALTTPPHRAFY--HFVNLVAFVVVFVAKLPAMDSVRILGINR 156
            R+  GL     P  +WT+VNV+HA +TF +FHW+KG+PF T W       +++TWWEQ+D   QNTPSRKF   +V  LY     +TP  R F   H VNL AF+VVFVAKLP M  VRI GINR
Sbjct:   24 RVFFGLGLSLNPVESWTIVNVVHACVTFIVFHWIKGNPFHTPWVDMAGKGERQTWWEQIDGSVQNTPSRKFLIGVVVFLYLATVHSTPLDRQFLFVHVVNLAAFLVVFVAKLPFMHGVRIFGINR 148          
BLAST of Ggra9935.t1 vs. uniprot
Match: A0A087SIH1 (Uncharacterized protein n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SIH1_AUXPR)

HSP 1 Score: 107 bits (266), Expect = 1.370e-26
Identity = 63/157 (40.13%), Postives = 92/157 (58.60%), Query Frame = 0
Query:    2 QAGHGSQPDDVG--VEWLNAPAAWAFYLSIIATVRLLAGLFPGCTPFHAWTVVNVLHAVITFYIFHWLKGSPFPTYWAIGTPSNDKRTWWEQLDHRWQNTPSRKFCTAIVCLLYFCAALTTPPHRAFYHFVNLVAFVVVFVAKLPAMDSVRILGINR 156
            QAG G +  +      WL++PAAW +Y++++    LL   F    P  AWT V++ H V+T+ IFHW+KGSP      +     D +T+WEQ+D   Q TP+RKF TA+  +L+  A+  T   R     VNL+  +V+ +AKL +M  VRILGIN+
Sbjct:    7 QAGLGIKASEANKNTNWLDSPAAWVYYVALLLLSWLLVSSFTD--PGIAWTYVHIAHGVLTYIIFHWVKGSPIANDQGV----YDSQTFWEQIDDGQQFTPARKFLTAVPVVLFLLASNGTDYRRQPLG-VNLIVVIVLVIAKLASMHRVRILGINK 156          
The following BLAST results are available for this feature:
BLAST of Ggra9935.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J1P73.510e-10790.38Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QQ884.380e-9280.13Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6NK642.990e-6057.05Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A6T6BZK53.970e-5953.75Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
M2VW066.420e-5753.85Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
M1UVF71.270e-5252.53Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]
A0A7S1ETC91.610e-4553.74Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4Z6435.080e-4450.63Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7J7IQ671.850e-3552.00S n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2... [more]
A0A087SIH11.370e-2640.13Uncharacterized protein n=2 Tax=Auxenochlorella pr... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007203ORMDL familyPFAMPF04061ORMDLcoord: 14..150
e-value: 8.2E-33
score: 113.1
IPR007203ORMDL familyPANTHERPTHR12665ORMDL PROTEINScoord: 14..156
NoneNo IPR availablePANTHERPTHR12665:SF7ORM1-LIKE PROTEINcoord: 14..156
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 126..146
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 121..125
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..45
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 104..120
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 68..103
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..40
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..67
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 147..156
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availableTMHMMTMhelixcoord: 132..154
NoneNo IPR availableTMHMMTMhelixcoord: 104..122
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
NoneNo IPR availableTMHMMTMhelixcoord: 45..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000887_piloncontigtig00000887_pilon:132723..133193 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9935.t1Ggra9935.t1Gracilaria gracilis GNS1m malemRNAtig00000887_pilon 132723..133193 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9935.t1 ID=Ggra9935.t1|Name=Ggra9935.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=157bp
MQAGHGSQPDDVGVEWLNAPAAWAFYLSIIATVRLLAGLFPGCTPFHAWT
VVNVLHAVITFYIFHWLKGSPFPTYWAIGTPSNDKRTWWEQLDHRWQNTP
SRKFCTAIVCLLYFCAALTTPPHRAFYHFVNLVAFVVVFVAKLPAMDSVR
ILGINR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007203ORMDL