Ggra9932.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9932.t1
Unique NameGgra9932.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length426
Homology
BLAST of Ggra9932.t1 vs. uniprot
Match: A0A2V3IML1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IML1_9FLOR)

HSP 1 Score: 134 bits (336), Expect = 2.810e-32
Identity = 126/307 (41.04%), Postives = 173/307 (56.35%), Query Frame = 0
Query:  149 MFGDKFWQGIDSDFAKKSAKETAEATAANQKIMEERQANREKRKLEREEFFREERELESKGLLDERSKGKRRLQFSEKDWVAVDIPIPISQQKSSALARLAQTNSKAFKASRGKGNDYVKY-LKNGER----ERRETRAQLDERARRLRERIVSISTPQVQPSQSRRSE-KGCFANGKNVTQKTSRKNRESSCLERYVSGC----------------DDR-------------KKTKCSRDGYHTEAESDDXXXXXXXX---DVYDISAIDREEARSARIAKMEDKRELKRLKQSEQEKALRRGEFE 417
            MFG+ +++G+D  FA+K+AKE+AEAT   Q+I+ ER+A  E+ K E EE  R+ERELE KGLLDE +K  RR   S+KDWVAVD PIPI  QK+SA+ R A+ N+ A  +     +   K   K+G      ++R T A++ ERARR +ERI+ I+ P+    +S  S+  G                 + S ++                      DDR             KK   SR GY +E  SD XXXXXXXX   ++YDISA+++EEARSAR+A +EDKRE  R +Q ++EK  RR +FE
Sbjct:    1 MFGEDYYKGLDLAFAEKAAKESAEATKEAQEIIAERKAXXERIKREAEENVRKERELERKGLLDEETKYARRRAVSDKDWVAVDTPIPIRLQKNSAIVRKARANAAAVPSGSSTPSASSKSAFKSGSTSASVQKRRTTAEVRERARRFKERIMKIAEPKKAAVKSTSSKTSGSDXXXXXXXXXXXXIESDESDIDXXXXXXXXXXXXXXXXXXXXXXDDRYKRRRDSSRSRHEKKRSYSRRGYISEDFSDGXXXXXXXXXXGNLYDISALEKEEARSARLAALEDKRERIRERQYKREKERRRRDFE 307          
BLAST of Ggra9932.t1 vs. uniprot
Match: R7Q4T3 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4T3_CHOCR)

HSP 1 Score: 96.7 bits (239), Expect = 1.030e-18
Identity = 97/303 (32.01%), Postives = 156/303 (51.49%), Query Frame = 0
Query:  125 MEYVVRRKKEEKHIQIPHTSDYSDMFGDKFWQGIDSDFAKKSAKETAEATAANQKIMEERQANREKRKLEREEFFREERELESKGLLDERSKGKRRLQFSEKDWVAVDIPIPISQQKSSALARLAQTNSKAFKASRG-KGNDYVKYLKNGERERRETRAQLDERARRLRERIVSI----------------STPQVQPSQSRRSEKGCFANGKNVTQKTSRKNRESSCL---ERYV-SGCDDRKKTKCSRD----GYHTEAESD--DXXXXXXXXDVYDISAIDREEARSARIAKMEDKRELK 400
            M++V RR K+ K I +PHTSDYSD+FGD +  GID     K  +E+A+A    +KI  E +A R+KR  E EE  RE  E++ +G+ +++     RL+ +EKDWVAVDIP   +    S  A L  ++S A  +  G   N  +  +   +RE     A++ ++   LR+ I++                 S+P+ +P  S + ++    + +++ +++         L    +Y  S  DDR+  K   D    GY++E   D  D        D++ I A+DREE  SAR+A +ED+REL+
Sbjct:    1 MQFVERRDKK-KEINVPHTSDYSDLFGDDYLVGIDLKCVTKMKEESAKAAKEAEKIHAEHEAQRQKRLKEAEEIAREAAEMKRRGV-NQKETNVWRLKATEKDWVAVDIPT--NALTPSERAHLKASSSSAQPSRLGVASNSGITKVSKAKREALGA-AEIAKKKAALRQSILAATGGAKPARTNRVRSVSSSPERRPMPSGKRKRALDDDRRSLDRRSGXXXXXXXXLVSDRKYDRSARDDRRPKKPRYDDRSMGYNSEEWGDELDGDDDDNDEDLFGIEALDREEEESARLAAIEDRRELR 298          
The following BLAST results are available for this feature:
BLAST of Ggra9932.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IML12.810e-3241.04Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q4T31.030e-1832.01Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 176..196
NoneNo IPR availableCOILSCoilCoilcoord: 29..56
NoneNo IPR availableCOILSCoilCoilcoord: 270..290
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 169..194
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 347..362
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 363..378
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 267..294
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 297..324
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 347..425
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 379..425
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 256..331

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000887_piloncontigtig00000887_pilon:127048..128325 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9932.t1Ggra9932.t1Gracilaria gracilis GNS1m malemRNAtig00000887_pilon 127048..128325 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9932.t1 ID=Ggra9932.t1|Name=Ggra9932.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=426bp
MSEESFTSQLLKGIKKRANVAHEKALERVRRGEARFELQEEAKEELEKAR
LGAEADEILSRSKPKTALKRRRIITKAVKTKRLSSTTHSDTIEVRQSTVN
NARVIYRAPRKGQPSRPPGKPRANMEYVVRRKKEEKHIQIPHTSDYSDMF
GDKFWQGIDSDFAKKSAKETAEATAANQKIMEERQANREKRKLEREEFFR
EERELESKGLLDERSKGKRRLQFSEKDWVAVDIPIPISQQKSSALARLAQ
TNSKAFKASRGKGNDYVKYLKNGERERRETRAQLDERARRLRERIVSIST
PQVQPSQSRRSEKGCFANGKNVTQKTSRKNRESSCLERYVSGCDDRKKTK
CSRDGYHTEAESDDSESESEDEDVYDISAIDREEARSARIAKMEDKRELK
RLKQSEQEKALRRGEFESDTNGRRQ*
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