Ggra9914.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9914.t1
Unique NameGgra9914.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length264
Homology
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BLAST of Ggra9914.t1 vs. uniprot
Match: A0A2V3J1Q9 (Kinetochore protein SPC25 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1Q9_9FLOR)

HSP 1 Score: 211 bits (537), Expect = 1.230e-64
Identity = 116/245 (47.35%), Postives = 163/245 (66.53%), Query Frame = 0 
Query:   14 LDGSTATRMNEKLEKINRLMGLMDQRTXXXXXXXRESTRILEELAEKVIQQDQKRDIIYMNAMSDRKENLEKEQAMCKFAEDALEAREDQFRQLHMQKNELEEAIESLREKVNILPYERKRYEGKLIEGGRRLRSGRRVLEGRLKQVNQTLSRDEESTRKFEAFLGVNVRAVDDKCLEFSFNNIKSDEPHRQFKVTVFGDDGRFSATHCEPEIDNFRALKEQLSEDGQLIDFLHRVRKSFRLHVK 258
            +D  T  R+N  LEKINR+M ++D+ T         S RILEELA+K+IQ+D+KR  +Y+  MSD KEN+EKEQAM  +A + LE+  ++ RQL  Q  EL +A+ +LREKV  +P E++R E +L+E  RRL+  +  ++ RL  V   + R  +S R+FE  LGV +RA+ DKC+EFSF  I  ++P  +FKVTV   DGRF AT C P ++ F  LK+ L+ED +LIDFL+R+R +F  HVK
Sbjct:    1 MDKVTTARVNTALEKINRMMTMIDEYTEDSVQAAYNSGRILEELADKLIQKDKKRRTMYLTTMSDCKENVEKEQAMYNYANETLESLRNKERQLQSQAGELRDAVHTLREKVQTVPLEKRRNEARLLEEDRRLKDQKLSVDKRLNHVKSVVHRTSDSVRRFEDLLGVKLRAIRDKCIEFSFICIDEEDPFAEFKVTVDNRDGRFRATVCVPLVEEFGELKQTLAEDDELIDFLYRIRIAFNGHVK 245
The following BLAST results are available for this feature:
BLAST of Ggra9914.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J1Q91.230e-6447.35Kinetochore protein SPC25 n=1 Tax=Gracilariopsis c... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 83..124
NoneNo IPR availableGENE3D3.30.457.50Chromosome segregation protein Spc25coord: 159..260
e-value: 1.7E-16
score: 62.0
IPR013255Chromosome segregation protein Spc25, C-terminalPFAMPF08234Spindle_Spc25coord: 185..254
e-value: 1.6E-12
score: 47.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000887_piloncontigtig00000887_pilon:79318..80303 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9914.t1Ggra9914.t1Gracilaria gracilis GNS1m malemRNAtig00000887_pilon 79318..80303 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9914.t1 ID=Ggra9914.t1|Name=Ggra9914.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=264bp
MSISSSLLETPVGLDGSTATRMNEKLEKINRLMGLMDQRTEETTKTTRES
TRILEELAEKVIQQDQKRDIIYMNAMSDRKENLEKEQAMCKFAEDALEAR
EDQFRQLHMQKNELEEAIESLREKVNILPYERKRYEGKLIEGGRRLRSGR
RVLEGRLKQVNQTLSRDEESTRKFEAFLGVNVRAVDDKCLEFSFNNIKSD
EPHRQFKVTVFGDDGRFSATHCEPEIDNFRALKEQLSEDGQLIDFLHRVR
KSFRLHVKANNVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013255Spc25_C