Ggra9913.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9913.t1
Unique NameGgra9913.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length98
Homology
BLAST of Ggra9913.t1 vs. uniprot
Match: A0A067L9N7 (Uncharacterized protein n=4 Tax=Crotonoideae TaxID=235631 RepID=A0A067L9N7_JATCU)

HSP 1 Score: 57.4 bits (137), Expect = 5.540e-9
Identity = 26/47 (55.32%), Postives = 32/47 (68.09%), Query Frame = 0
Query:   19 ACFSFPMLMHSLSSRPTIDTSRPLKPDAVRRGAFNNSGSRDVGPDPH 65
            A  +FP  M S  SRP ID+S+PL P A  RG + N+GSRD+GPD H
Sbjct:   19 AGLAFPFYMASSRSRPVIDSSKPLPPQATFRGPYINTGSRDIGPDHH 65          
BLAST of Ggra9913.t1 vs. uniprot
Match: B6T072 (Uncharacterized protein n=3 Tax=Zea mays TaxID=4577 RepID=B6T072_MAIZE)

HSP 1 Score: 55.8 bits (133), Expect = 2.230e-8
Identity = 29/64 (45.31%), Postives = 37/64 (57.81%), Query Frame = 0
Query:    1 MSNAARLRTAAVVSLLGLACFSFPMLMHSLSSRPTIDTSRPLKPDAVRRGAFNNSGSRDVGPDP 64
            MS A     A  + L   A  SFP L     S+P ID+++PL P A  RG + N+GSRD+GPDP
Sbjct:    1 MSKARNAVVATGLLLFAGAGLSFPFLFVKSKSKPIIDSTKPLPPQATFRGPYVNTGSRDIGPDP 64          
BLAST of Ggra9913.t1 vs. uniprot
Match: A0A5J4YVL8 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVL8_PORPP)

HSP 1 Score: 56.2 bits (134), Expect = 4.380e-8
Identity = 29/57 (50.88%), Postives = 35/57 (61.40%), Query Frame = 0
Query:    8 RTAAVVSLLGLACFSFPMLMHSLSSRPTIDTSRPLKPDAVRRGAFNNSGSRDVGPDP 64
            +  A VSL GL  FSFP        +P  D + PL+P  VRRG FNNSGS+D+G DP
Sbjct:   48 KVVAGVSLFGLVMFSFPYWYSQW--KPQRDMNAPLRPHEVRRGPFNNSGSKDIGADP 102          
BLAST of Ggra9913.t1 vs. uniprot
Match: A0A1U7YNV7 (uncharacterized protein LOC104586200 n=4 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U7YNV7_NELNU)

HSP 1 Score: 54.7 bits (130), Expect = 6.330e-8
Identity = 30/63 (47.62%), Postives = 39/63 (61.90%), Query Frame = 0
Query:    6 RLRTAAVVSLLGLACF-----SFPMLMHSLSSRPTIDTSRPLKPDAVRRGAFNNSGSRDVGPD 63
            RLR A V S  GL  F     +FP L  +  ++P ID+S+PL P A  RG + N+GSRD+GPD
Sbjct:    3 RLRNAIVAS--GLVAFXAAGLAFPFLFVTTKTKPVIDSSKPLPPQATFRGPYINTGSRDLGPD 63          
BLAST of Ggra9913.t1 vs. uniprot
Match: V4UEF1 (Uncharacterized protein n=4 Tax=Citrus TaxID=2706 RepID=V4UEF1_CITCL)

HSP 1 Score: 55.5 bits (132), Expect = 6.700e-8
Identity = 31/64 (48.44%), Postives = 40/64 (62.50%), Query Frame = 0
Query:    5 ARLRTAAVVSLLGLACFS-----FPMLMHSLSSRPTIDTSRPLKPDAVRRGAFNNSGSRDVGPD 63
            AR R A V +  GL  F+     FP  M S +S+P ID+S+PL P A  RG + N+GSRD+GPD
Sbjct:   34 ARSRNAIVAT--GLVVFAAAGLAFPFYMASSTSKPVIDSSKPLPPQATFRGPYINTGSRDIGPD 95          
BLAST of Ggra9913.t1 vs. uniprot
Match: uncharacterized protein LOC120001776 n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=UPI0018F83C99 (uncharacterized protein LOC120001776 n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=UPI0018F83C99)

HSP 1 Score: 53.9 bits (128), Expect = 1.270e-7
Identity = 27/61 (44.26%), Postives = 38/61 (62.30%), Query Frame = 0
Query:    8 RTAAVVSLLGLACFS-----FPMLMHSLSSRPTIDTSRPLKPDAVRRGAFNNSGSRDVGPD 63
            R+  V+   GL  F+     FP  M +  S+P ID+S+PL P A+ RG + N+GSRD+GPD
Sbjct:    3 RSRNVIVATGLVAFACAGLAFPFYMVTPRSKPVIDSSKPLPPQAIIRGPYINTGSRDIGPD 63          
BLAST of Ggra9913.t1 vs. uniprot
Match: A0A438KFL9 (Uncharacterized protein n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438KFL9_VITVI)

HSP 1 Score: 53.1 bits (126), Expect = 2.670e-7
Identity = 26/61 (42.62%), Postives = 38/61 (62.30%), Query Frame = 0
Query:    8 RTAAVVSLLGLACFS-----FPMLMHSLSSRPTIDTSRPLKPDAVRRGAFNNSGSRDVGPD 63
            R+  V+   GL  F+     FP  + +L S+P ID+S+PL P A+ RG + N+GS D+GPD
Sbjct:    5 RSRNVILATGLLAFAAAGLAFPYYLVALKSKPVIDSSKPLPPQAIIRGPYLNTGSHDIGPD 65          
BLAST of Ggra9913.t1 vs. uniprot
Match: A0A6G0X9E4 (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X9E4_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 2.730e-7
Identity = 25/63 (39.68%), Postives = 37/63 (58.73%), Query Frame = 0
Query:   13 VSLLGLACFSFP-MLMHSLSSRPTIDTSRPLKPDAVRRGAFNNSGSRDVGPDPHWQNGVRVRR 74
            V L GLA ++ P +++ +   + T+    PL    +RRGAF NSGS+D+GPDP W +     R
Sbjct:   20 VVLAGLAMYALPYVVVQAKKGQTTLSKDGPLSTTEIRRGAFLNSGSKDIGPDPDWDHATNTYR 82          
BLAST of Ggra9913.t1 vs. uniprot
Match: A0A485KWD2 (Aste57867_12736 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KWD2_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 7.190e-7
Identity = 26/62 (41.94%), Postives = 37/62 (59.68%), Query Frame = 0
Query:   17 GLACFSFPMLM-HSLSSRPTIDTSRPLKPDAVRRGAFNNSGSRDVGPDPHWQ---NGVRVRR 74
            GLA ++ P L+      + T++   PL    +RRGAF NSGS+D+GPDP+W    N  + RR
Sbjct:   25 GLASYALPFLVVQGKKGQNTLEKDGPLSTTEIRRGAFLNSGSKDIGPDPNWDFKTNSYKGRR 86          
BLAST of Ggra9913.t1 vs. uniprot
Match: A0A1X6NJ76 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJ76_PORUM)

HSP 1 Score: 52.0 bits (123), Expect = 1.810e-6
Identity = 27/53 (50.94%), Postives = 32/53 (60.38%), Query Frame = 0
Query:   19 ACFSFP--MLMHSLSSRPTIDTSRPLKPDAVRRGAFNNSGSRDVGPDPHWQNG 69
            A F+ P  ML +S +   T  T  PL   AVRRGA+ NSGSRD G DP W +G
Sbjct:   18 ALFALPYVMLRYSAAGAVTTTTEAPLSNQAVRRGAYINSGSRDAGVDPDWVDG 70          
The following BLAST results are available for this feature:
BLAST of Ggra9913.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A067L9N75.540e-955.32Uncharacterized protein n=4 Tax=Crotonoideae TaxID... [more]
B6T0722.230e-845.31Uncharacterized protein n=3 Tax=Zea mays TaxID=457... [more]
A0A5J4YVL84.380e-850.88Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A1U7YNV76.330e-847.62uncharacterized protein LOC104586200 n=4 Tax=Nelum... [more]
V4UEF16.700e-848.44Uncharacterized protein n=4 Tax=Citrus TaxID=2706 ... [more]
uncharacterized protein LOC120001776 n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=UPI0018F83C991.270e-744.26uncharacterized protein LOC120001776 n=1 Tax=Tript... [more]
A0A438KFL92.670e-742.62Uncharacterized protein n=2 Tax=Vitis vinifera Tax... [more]
A0A6G0X9E42.730e-739.68Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A485KWD27.190e-741.94Aste57867_12736 protein n=1 Tax=Aphanomyces stella... [more]
A0A1X6NJ761.810e-650.94Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..97
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..97
NoneNo IPR availablePANTHERPTHR36070OSJNBA0019G23.7 PROTEINcoord: 19..65
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..97
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..32
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..20
score: 5.0
NoneNo IPR availableTMHMMTMhelixcoord: 10..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000887_piloncontigtig00000887_pilon:78301..78713 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9913.t1Ggra9913.t1Gracilaria gracilis GNS1m malemRNAtig00000887_pilon 78301..78713 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9913.t1 ID=Ggra9913.t1|Name=Ggra9913.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=98bp
MSNAARLRTAAVVSLLGLACFSFPMLMHSLSSRPTIDTSRPLKPDAVRRG
AFNNSGSRDVGPDPHWQNGVRVRRHNHRDRDRDPHPHPASHPSTDRQ*
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