Ggra991.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra991.t1
Unique NameGgra991.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length287
Homology
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BLAST of Ggra991.t1 vs. uniprot
Match: A0A2V3IMG1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMG1_9FLOR)

HSP 1 Score: 221 bits (563), Expect = 9.220e-68
Identity = 197/285 (69.12%), Postives = 227/285 (79.65%), Query Frame = 0 
Query:    1 MQDTLVGLCAAGLWDEADALIDQLIALSEEELAEALQETHGTPKWTSLHYAAICKPTPSTLEKLVDSGADLEARGSSGSTPLHLAAWNGCDEAAHFLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIEEADANGVTPGDLAEGEAKDVLDDDLRSDWSMRRALSGVLNIQSWRDRFAGLARHVGGNGSVPPSPXXXXXXXXXXXNPSLSISN--RPVNRGELYAAVGAGVLISLLLPIARGGG 283
            MQDTLV LCAAG W+E DALIDQL++ SEEELA AL+ETHG P+W+SLHYAAI KPTP TL KLV +GA+LEARGSSGSTPLHLAAWNG  +AA    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA  + D  G TP +LA  +AK+V +DDL SDW++ + +  V+N+Q+WR+R  GL     G GS+PPSP           +P  S ++  +PV R ELYAAVGAG+LIS+L P+ARGGG
Sbjct:    1 MQDTLVDLCAAGRWEEVDALIDQLVSFSEEELAAALRETHGKPQWSSLHYAAIAKPTPPTLRKLVKAGAELEARGSSGSTPLHLAAWNGSVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARNDPDEEGTTPDELAHDDAKNVFEDDLHSDWTVGKTILRVMNVQAWRERLFGLGPP--GGGSLPPSPPPSPNSVSLP-SPRFSSADCEKPVRRRELYAAVGAGILISILFPLARGGG 282
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BLAST of Ggra991.t1 vs. uniprot
Match: R7QCD5 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCD5_CHOCR)

HSP 1 Score: 68.6 bits (166), Expect = 1.860e-9
Identity = 35/70 (50.00%), Postives = 44/70 (62.86%), Query Frame = 0 
Query:   24 LIALSEEELAEALQETHGTPKWTSLHYAAICKPTPSTL-EKLVDSGADLEARGSSGSTPLHLAAWNGCDE 92
            L +L    LA  L  T G   WT LH+ A     P++L E L+ +GA ++AR SSGSTPLHLAAW+GC E
Sbjct:   82 LQSLPPASLASELSATAGPSAWTPLHFVAAASLAPASLMEALLAAGAPIDARASSGSTPLHLAAWHGCTE 151
The following BLAST results are available for this feature:
BLAST of Ggra991.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IMG19.220e-6869.12Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QCD51.860e-950.00Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 78..93
score: 45.59
coord: 126..140
score: 32.25
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 77..106
e-value: 9.9E-4
score: 28.4
coord: 110..139
e-value: 0.0012
score: 28.1
coord: 143..174
e-value: 0.57
score: 19.2
coord: 43..73
e-value: 54.0
score: 12.7
IPR002110Ankyrin repeatPFAMPF12796Ank_2coord: 48..141
e-value: 3.8E-14
score: 53.0
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 143..168
score: 10.31223
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 110..142
score: 13.67769
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 77..109
score: 12.34219
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 2..110
e-value: 6.6E-19
score: 70.0
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 111..198
e-value: 2.4E-20
score: 74.4
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 40..184
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 225..253
NoneNo IPR availablePANTHERPTHR24189MYOTROPHINcoord: 39..115
coord: 38..275
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 280..286
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 262..279
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..261
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 77..109
score: 10.975266
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 143..168
score: 10.28545
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 110..141
score: 12.301834

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000027_piloncontigtig00000027_pilon:85121..85981 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra991.t1Ggra991.t1Gracilaria gracilis GNS1m malemRNAtig00000027_pilon 85121..85981 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra991.t1 ID=Ggra991.t1|Name=Ggra991.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=287bp
MQDTLVGLCAAGLWDEADALIDQLIALSEEELAEALQETHGTPKWTSLHY
AAICKPTPSTLEKLVDSGADLEARGSSGSTPLHLAAWNGCDEAAHFLVAN
GASIEASSKNGRTPLMFAARRGDSGMMNSLIQLGADVRARDQRGRSALHF
AAQSGQADAMRKLFQEGAIEEADANGVTPGDLAEGEAKDVLDDDLRSDWS
MRRALSGVLNIQSWRDRFAGLARHVGGNGSVPPSPPPSPESSPRSSNPSL
SISNRPVNRGELYAAVGAGVLISLLLPIARGGGSQS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf