Ggra9904.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9904.t1
Unique NameGgra9904.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length251
Homology
BLAST of Ggra9904.t1 vs. uniprot
Match: A0A2V3J1N8 (SAGA-associated factor 29 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1N8_9FLOR)

HSP 1 Score: 336 bits (861), Expect = 3.730e-114
Identity = 204/249 (81.93%), Postives = 217/249 (87.15%), Query Frame = 0
Query:    1 MLLTEECVHVQVPRAAAERQKFIAAQEKRWLSLGWDRTRYTTDLAQAATRFLSAIAFSDHRHPIDLNLLSDDAGSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAENDAPARKPPKKPKRSNKSTVIASGTKVACLDRCGDAEEHQWVLGTVSKYSSDSRKYEVIDDADGEAQIYSVPKRDLRVLPCKPHTFDSKKRILAVYPQTTVFYPAWLKSRKGRNWLVEFDDEDDQEENKLKEVDSRHIIQ 249
            MLLTEEC H+QVPRAAAER KFIAAQEKRWL+LGWDRTRYTT+LA AA+RFLSAIAFSDHR PIDLNLLSDDAGS AXXXXXXXXXXXXXXXXXXXXXXXXXXXXX               KR+NKSTVIASGTKVACLDR  DA+EHQWVLGTVS+YSSD+RKYEVIDDADGE Q YSVPKRDLRVLP K   FD+KKR+LAVYP TTVFYPA LK+RKG+NWLVEF+DEDD EENKLKEVD RHIIQ
Sbjct:    1 MLLTEECAHIQVPRAAAERHKFIAAQEKRWLALGWDRTRYTTELAHAASRFLSAIAFSDHRDPIDLNLLSDDAGSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------KRTNKSTVIASGTKVACLDRSADADEHQWVLGTVSRYSSDTRKYEVIDDADGETQTYSVPKRDLRVLPTKCPNFDTKKRVLAVYPYTTVFYPASLKTRKGKNWLVEFEDEDDHEENKLKEVDGRHIIQ 241          
BLAST of Ggra9904.t1 vs. uniprot
Match: A0A7S0BUQ8 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BUQ8_9RHOD)

HSP 1 Score: 90.9 bits (224), Expect = 3.670e-19
Identity = 52/137 (37.96%), Postives = 78/137 (56.93%), Query Frame = 0
Query:  128 TVIASGTKVACLDRCGDAEEHQWVLGTVSKYSSDSRKYEVIDDAD-----------GEAQIYSVPKRDLRVLPCKPHTFDSKK-RILAVYPQTTVFYPAWLK----SRKGRNWLVEFDDEDDQEENKLKEVDSRHII 248
            T +   T VAC  R  ++ + QW+LG + +Y  +SRKYEV+D  D           G  + Y + K  +RVLP +P    +K  R LAVYP TTVFYPA +     +R+ R + +EFDDE++Q + + K V + H++
Sbjct:   17 TGLEPDTNVACKVRDAESGDSQWILGRLLQYFPESRKYEVLDVGDSDEVAQQRKPSGRPRCYKLSKSKIRVLPSEPRLDLAKNARTLAVYPNTTVFYPATVHISAMTREDREYTLEFDDEEEQGDLRWKRVPAYHVL 153          
BLAST of Ggra9904.t1 vs. uniprot
Match: M2VXE3 (SGF29 C-terminal domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VXE3_GALSU)

HSP 1 Score: 90.5 bits (223), Expect = 3.010e-17
Identity = 54/141 (38.30%), Postives = 83/141 (58.87%), Query Frame = 0
Query:  119 KKPKRSNKSTVIASGTKVACLDRCGDAEEHQWVLGTVSKYSSDSRKYEVID-------DADGEAQIYSVPKRDLRVLPCKPHTFDSKKRILAVYPQTTVFYPAWLKS--RKGRN--WLVEFDDEDDQEENKLKEVDSRHII 248
            K+ KRS++S VI   T+VAC  +  D++E  WVLG V  YS+ S +Y +ID       +   E   +  P   + +     H F ++ R+LA+YP TTVFYPA ++S  + G+   + +EFDDED+ EE  +K V +R++I
Sbjct:  293 KRSKRSHESGVIPPQTEVACRVKEEDSDEWTWVLGIVDSYSNSSGQYRIIDIEELGNEEVAKERYYFVSPSNVIPLSSDTKHVFPAETRVLAIYPDTTVFYPATIRSSRKNGKQLYYALEFDDEDEDEEI-VKHVPARYVI 432          
BLAST of Ggra9904.t1 vs. uniprot
Match: Q1ZXN8 (DUF1325 family protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q1ZXN8_DICDI)

HSP 1 Score: 77.0 bits (188), Expect = 1.340e-12
Identity = 41/113 (36.28%), Postives = 70/113 (61.95%), Query Frame = 0
Query:  144 DAEEHQWVLGTVSKYSSDSRKYEVIDDADGEAQIYSVPKRDLRVLPCK---PHTFDSKKRILAVYPQTTVFYPAWL---KSRKGRNWLVEFDDEDDQE--ENKLKEVDSRHII 248
            D++ +QW+L  VS +S  ++KYEVID+ + E++ +SV ++D+  LP     P TF +  ++LA++P TT FYPA +   +  KG+        EDDQE  E   + V+++H++
Sbjct:  295 DSKSNQWILAKVSSFSQKTQKYEVIDEDEEESKRFSVGQKDIIQLPSHTNLPPTFSNNTKVLAMFPDTTAFYPAVVVNVQKVKGKPTFYHLHFEDDQENGETPNRRVNAQHVV 407          
BLAST of Ggra9904.t1 vs. uniprot
Match: A0A1X6NN27 (SGF29 C-terminal domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NN27_PORUM)

HSP 1 Score: 72.8 bits (177), Expect = 4.610e-11
Identity = 49/128 (38.28%), Postives = 70/128 (54.69%), Query Frame = 0
Query:  130 IASGTKVACLDRCGDAEEHQ---WVLGTVSKYSSDSRKYEVID-----DADGEAQ-----------IYSVPKRDLRVLPCKPHT-FDSKKRILAVYPQTTVFYPAWLK----SRKGRNWLVEFDDEDD 233
            +   T+VAC  R  D E      W+LGTV +Y++D++KYEV+D     D D +A+            YSVP+  L VL   P+    +  R+LA+YP TT FYPA +     SR+   +L+ FDDE+D
Sbjct:  372 VQPDTEVACKVR--DLEGSGGWIWILGTVLRYAADTKKYEVLDAGEVEDDDNDAEKRRNGHPPQPKSYSVPRNQLSVLLPNPNMRLSAGTRVLAMYPDTTTFYPATVAENAASRRDHMYLLNFDDEED 497          
BLAST of Ggra9904.t1 vs. uniprot
Match: A0A8J4PWZ6 (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PWZ6_9MYCE)

HSP 1 Score: 70.9 bits (172), Expect = 1.230e-10
Identity = 41/125 (32.80%), Postives = 73/125 (58.40%), Query Frame = 0
Query:  132 SGTKVACLDRCGDAEEHQWVLGTVSKYSSDSRKYEVIDDADGEAQIYSVPKRDLRVLPCK---PHTFDSKKRILAVYPQTTVFYPAWLKS---RKGR--NWLVEFDDEDDQEENKLKEVDSRHII 248
            SG +VA  D    ++  QW+L  V+ ++  ++KYEVID+ + E + +SV  +D+  LP     P TF +  ++LA++P TT FYPA + S    KG+  ++ + F+D+ +  +   + V + H+I
Sbjct:  204 SGQQVAAKD----SKSSQWILAKVNGFNQKTQKYEVIDEDEDEPKRFSVAPKDVIQLPTLSTLPPTFANNTKVLAMFPDTTAFYPAVVVSVTKTKGKPTHYTLHFEDDQENGQTPNRRVSALHVI 324          
BLAST of Ggra9904.t1 vs. uniprot
Match: D3BMD1 (DUF1325 family protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BMD1_POLPP)

HSP 1 Score: 69.3 bits (168), Expect = 4.530e-10
Identity = 40/113 (35.40%), Postives = 66/113 (58.41%), Query Frame = 0
Query:  127 STVIASGTKVACLDRCGDAEEHQWVLGTVSKYSSDSRKYEVIDDADGEAQIYSVPKRDLRVLPCK---PHTFDSKKRILAVYPQTTVFYPAWL-KSRKGRN----WLVEFDDE 231
            S  I  GT+VA  ++      + W+L  V  Y+S ++KYEVID+ + E++ + V  +D+  LP     P TF +  ++LA++P TT FYPA +  S+K +N    + + FDD+
Sbjct:  208 SAQIPPGTQVAAKEK-----SNNWILAKVGSYNSKTQKYEVIDEDEDESKKFHVSIKDIIQLPSANSLPPTFAANTKVLAMFPDTTTFYPAVVVSSQKVKNKTSFYTLHFDDD 315          
BLAST of Ggra9904.t1 vs. uniprot
Match: hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006448AF7 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006448AF7)

HSP 1 Score: 65.9 bits (159), Expect = 7.140e-9
Identity = 37/110 (33.64%), Postives = 67/110 (60.91%), Query Frame = 0
Query:  130 IASGTKVACLDRCGDAEEHQWVLGTVSKYSSDSRKYEVIDDADGEAQIYSVPKRDLRVLPCKP---HTFDSKKRILAVYPQTTVFYPAWLK-SRKGRN----WLVEFDDE 231
            I  GT+VA  DR      + W+L  V+ +++ ++KYE+ID+ + E++ ++V  +D+  LP      +TF +  ++LA++P TT FYPA +  S+K +N    + + FDD+
Sbjct:  217 IPIGTQVAAKDR-----SNNWILAKVNSFNAKTQKYELIDEDEAESKKFTVSLKDIIQLPTTAALANTFATNTKVLAMFPDTTTFYPALVVGSQKIKNKTTQYTLHFDDD 321          
BLAST of Ggra9904.t1 vs. uniprot
Match: F4Q7B2 (DUF1325 family protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q7B2_CAVFA)

HSP 1 Score: 65.5 bits (158), Expect = 9.840e-9
Identity = 39/134 (29.10%), Postives = 74/134 (55.22%), Query Frame = 0
Query:  124 SNKSTVIASGTKVACLDRCGDAEEHQWVLGTVSKYSSDSRKYEVIDDADGEAQIYSVPKRDLRVLPCKP---HTFDSKKRILAVYPQTTVFYPAWLKS-----RKGRNWLVEFDDED-DQEENKLKEVDSRHII 248
            S+K   I +GT VA  ++  ++    W+L  V+ ++  ++KYEVID+ + E + + V  +D+  LP      + F S  ++LA++P TT FYPA + S      K  ++ + FDD+  D  +   + V +++++
Sbjct:  211 SSKEQQITNGTLVAAREKSNNSVN--WILAKVNGFNQKNQKYEVIDEDEDEPKRFFVIAKDIIQLPSTSSVSNNFSSGTKVLAMFPDTTAFYPAVVVSSTKVKNKTTHYTLHFDDDQGDNGQTPSRRVSAQYVV 342          
BLAST of Ggra9904.t1 vs. uniprot
Match: hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006450A93 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006450A93)

HSP 1 Score: 63.9 bits (154), Expect = 3.400e-8
Identity = 36/111 (32.43%), Postives = 63/111 (56.76%), Query Frame = 0
Query:  129 VIASGTKVACLDRCGDAEEHQWVLGTVSKYSSDSRKYEVIDDADGEAQIYSVPKRDLRVLP---CKPHTFDSKKRILAVYPQTTVFYPAWLKSR-----KGRNWLVEFDDE 231
             I  G  VA  ++      + W+L  V+ +++ ++KYEVID+ + E++ ++V  +D+  LP     P TF S  ++LA++P TT FYPA + S      K  ++ + FDD+
Sbjct:  229 TIPIGILVAAKEK-----NNNWILAKVNSFNAKTQKYEVIDEDEDESKKFNVGLKDIIQLPNPASLPPTFASSTKVLAMFPDTTTFYPAIVVSSQKVKSKTTHYTLHFDDD 334          
The following BLAST results are available for this feature:
BLAST of Ggra9904.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A2V3J1N83.730e-11481.93SAGA-associated factor 29 n=1 Tax=Gracilariopsis c... [more]
A0A7S0BUQ83.670e-1937.96Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M2VXE33.010e-1738.30SGF29 C-terminal domain-containing protein n=1 Tax... [more]
Q1ZXN81.340e-1236.28DUF1325 family protein n=1 Tax=Dictyostelium disco... [more]
A0A1X6NN274.610e-1138.28SGF29 C-terminal domain-containing protein n=1 Tax... [more]
A0A8J4PWZ61.230e-1032.80Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
D3BMD14.530e-1035.40DUF1325 family protein n=1 Tax=Polysphondylium pal... [more]
hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006448AF77.140e-933.64hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
F4Q7B29.840e-929.10DUF1325 family protein n=1 Tax=Cavenderia fascicul... [more]
hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006450A933.400e-832.43hypothetical protein n=1 Tax=Acytostelium subglobo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010750SGF29 tudor-like domainPFAMPF07039DUF1325coord: 133..249
e-value: 2.0E-21
score: 76.5
IPR010750SGF29 tudor-like domainPROSITEPS51518SGF29_Ccoord: 126..250
score: 28.851519
NoneNo IPR availableGENE3D2.30.30.140coord: 135..190
e-value: 1.6E-8
score: 36.3
NoneNo IPR availableGENE3D2.30.30.140coord: 191..250
e-value: 1.9E-10
score: 42.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..118
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..128
NoneNo IPR availablePANTHERPTHR21539:SF0SAGA-ASSOCIATED FACTOR 29coord: 81..248
IPR037802SAGA-associated factor 29PANTHERPTHR21539UNCHARACTERIZEDcoord: 81..248

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000887_piloncontigtig00000887_pilon:54887..55639 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9904.t1Ggra9904.t1Gracilaria gracilis GNS1m malemRNAtig00000887_pilon 54887..55639 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9904.t1 ID=Ggra9904.t1|Name=Ggra9904.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=251bp
MLLTEECVHVQVPRAAAERQKFIAAQEKRWLSLGWDRTRYTTDLAQAATR
FLSAIAFSDHRHPIDLNLLSDDAGSPADAGSSAGSGASRGSRASRGSRGA
RASGKRRAENDAPARKPPKKPKRSNKSTVIASGTKVACLDRCGDAEEHQW
VLGTVSKYSSDSRKYEVIDDADGEAQIYSVPKRDLRVLPCKPHTFDSKKR
ILAVYPQTTVFYPAWLKSRKGRNWLVEFDDEDDQEENKLKEVDSRHIIQE
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010750SGF29_tudor-like_dom
IPR037802SGF29