Ggra9723.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9723.t1
Unique NameGgra9723.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length162
Homology
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BLAST of Ggra9723.t1 vs. uniprot
Match: A0A2V3ILN1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILN1_9FLOR)

HSP 1 Score: 106 bits (265), Expect = 2.110e-24
Identity = 80/216 (37.04%), Postives = 96/216 (44.44%), Query Frame = 0 
Query:    5 HILLFITVLLTTFVLSCASLPRFPRDAGIFIKPRRSPFVGGVYAMSNNVTENTMVVYARRPDDTLQLLDGALKTGGRGAVFAPDAVFDPLQRR------------------------LSFRP-----------------------------------SGIPFSPDRRTLVVTNLFNGLNAIAAGGVREIFTYSVSATGLLSVVPVANVASTELGNS 161
            H  +F + LLTTF+LSC                  S FVGGVYAMSNN+  NTMVVYARR + TL+LLD AL TGG+GA       FDPL                           L  +P                                   + I FSPDRR+LVV++LF G NA+  G V EI  +SV   G LS  PV+   STEL N+
Sbjct:    3 HFQMFFSALLTTFLLSCVQASP------------SSEFVGGVYAMSNNLDANTMVVYARRRNGTLKLLDAALSTGGKGAEINVGMGFDPLFSANSVVITPDNKFVLAVNAGSSSVSVLEVQPDFSLLLVHVQPVAGLGPTSIAVSGNLVYVSSPDADAAIQFSPDRRSLVVSDLFFGFNALRTGTVNEIVVFSVDKFGHLSTAPVSTATSTELNNA 206
The following BLAST results are available for this feature:
BLAST of Ggra9723.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ILN12.110e-2437.04Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..161
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000105_piloncontigtig00000105_pilon:181609..182386 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9723.t1Ggra9723.t1Gracilaria gracilis GNS1m malemRNAtig00000105_pilon 181609..182386 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9723.t1 ID=Ggra9723.t1|Name=Ggra9723.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=162bp
MAIAHILLFITVLLTTFVLSCASLPRFPRDAGIFIKPRRSPFVGGVYAMS
NNVTENTMVVYARRPDDTLQLLDGALKTGGRGAVFAPDAVFDPLQRRLSF
RPSGIPFSPDRRTLVVTNLFNGLNAIAAGGVREIFTYSVSATGLLSVVPV
ANVASTELGNS*
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