Ggra9546.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9546.t1
Unique NameGgra9546.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length494
Homology
BLAST of Ggra9546.t1 vs. uniprot
Match: A0A2V3IH16 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH16_9FLOR)

HSP 1 Score: 280 bits (715), Expect = 3.530e-88
Identity = 178/259 (68.73%), Postives = 202/259 (77.99%), Query Frame = 0
Query:  241 VHAAHVPKEYFTRIVEELEGRATEYKAEIDEIAAFLKAQGVMLSSGASGFGNGTNPSLLDNLSQRYVDIGLSGTDTPSIPTG-TIEDIIRRQYEYFMVVASHIAVAHENLRAAREQFLQVLKERDTDAPNPFQQADMREKVEKDRQRLQSEKRAADGASQFVNQINSLSQPSSAPGTF---VPATGFGASSAAXXXXTQASLFQSSATTSSLFG-AP-AXXXXXXXXXXXXXXXXXXXGSSSASATDSEPNRATRRKRE 493
            + AAHVP EYFTR+VEELE RATEYKAEIDE+A FLKAQG++LSSGASGFGNG + SLLDNLSQRY+DIGLS +D  +IP G TIEDIIRRQY+YFMVVASHIA  +ENLRA +EQ+LQVL+ERD+D  NPFQQADMREKVEKDRQRL +EKRAA GA  FVN +N+L Q S+A G+    +   G G+SSAA    TQ SLFQSS TT SLFG AP A   XXXXXX    XXXXXX       +DSE  RATRRKR+
Sbjct:    1 MQAAHVPDEYFTRVVEELEARATEYKAEIDEVAEFLKAQGIVLSSGASGFGNGMSASLLDNLSQRYMDIGLSASDMGNIPRGRTIEDIIRRQYDYFMVVASHIANVNENLRAVKEQYLQVLRERDSDVLNPFQQADMREKVEKDRQRLLAEKRAAVGALSFVNSVNALPQSSAATGSAFGNLGTIGIGSSSAAGTLTTQPSLFQSSGTTGSLFGGAPTAAGAXXXXXXLFGGXXXXXXXXXXXXXSDSEAKRATRRKRD 259          
BLAST of Ggra9546.t1 vs. uniprot
Match: R7QKY7 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKY7_CHOCR)

HSP 1 Score: 259 bits (662), Expect = 2.540e-76
Identity = 169/325 (52.00%), Postives = 208/325 (64.00%), Query Frame = 0
Query:  105 AAQTQQAAAQQQQQIEITLRTRITELPPNFQNDLFAVERHLREQRNKASLLWSKRGDVDAKLLQTKANSADISRLLIKLRAELDALEANATSLKAAVRLERTSAQPVVTALENLSRRGY--SGYLDQNGLPFMDTGGRVH----AAHVPKEYFTRIVEELEGRATEYKAEIDEIAAFLKAQGVMLS-SG-------ASGFGNGT-NPSLLDNLSQRYVDIGLSGTDTPSIPTG-TIEDIIRRQYEYFMVVASHIAVAHENLRAAREQFLQVLKERDTDAPNPFQQADMREKVEKDRQRLQSEKRAADGASQFVNQINSLSQPSSA 413
            A Q QQ    Q Q  EI LRTR+ +LP NFQ DLFAVERHLREQR K + L S   + D+ + QTK  S +I+R L KLRA L+AL AN+ +LKAAVR+ER S +PVV ALENLS+  +     L  +   F   G  V       HVP++YF+R ++ELE RA EYK EIDEIA FL+A+G++LS SG       +S    GT N SLLD++SQR   IGL   D      G TIEDIIRRQYEYFMVVASHI   HENL A REQFLQ+L+ RD DA NPF+ AD REK E+ R++    K A +G   F   +N  + P++A
Sbjct:  170 APQQQQPQQSQSQTSEINLRTRVWQLPQNFQTDLFAVERHLREQRIKGTQLLSTGSNFDSDIAQTKTRSTNITRRLAKLRAVLEALRANSETLKAAVRIERGSTEPVVLALENLSKNSFRSEAVLFDDAFSFNYHGSSVQMRDRVTHVPEDYFSRTLDELESRAHEYKREIDEIAEFLRAKGLVLSRSGGKSAIAPSSHSATGTANGSLLDSISQRQFGIGLGANDMSMESRGKTIEDIIRRQYEYFMVVASHIGGVHENLWALREQFLQLLRVRDPDALNPFELADRREKAEEQRRQSAENKAAENG---FGFSMNESANPAAA 491          
BLAST of Ggra9546.t1 vs. uniprot
Match: A0A5J4Z7G7 (Nucleoporin p58/p45 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z7G7_PORPP)

HSP 1 Score: 99.0 bits (245), Expect = 2.760e-18
Identity = 85/271 (31.37%), Postives = 135/271 (49.82%), Query Frame = 0
Query:  125 TRITELPPNFQNDLFAVERHLREQRNKASLLWSKRG---DVDAKLLQTKANSADISRLLIKLRAELDALEANATSLKAAVRLERTSAQPVVTALEN--LSRRGYSGYLD---QNGLPFMDTGGRVHAAHVPKEYFTRIVEELEGRATEYKAEIDEIAAFLKAQGVMLSSGASGFGNGTNPSLLDNLSQRYVDIGLSGTDTPSIPTGTIEDIIRRQYEYFMVVASHIAVAHENLRAAREQFLQVLKERDTDAPNPFQQADMREKVEKDRQRL 387
            T+I +LPP+ Q+ L+ +E+H+REQ+ KAS +    G   DV  +        A +  +L K RA + AL+ +       VR +  SA+    ALEN  L+++  S Y     + G  +   GG      +P ++   +V  LE RA EYK E+DEI  FL+   + L +        T   +L     R   +  SG    S     +E +IRR YEYF++VAS     H+ +   + +++Q L+E + DAP+PF++A  R    K R+ +
Sbjct:  251 TKIADLPPHAQSLLYGLEKHMREQKKKASRMPQHEGLFRDVGERCDHVATACASVKNVLDKERAAVGALKYD-------VRAQLKSAENAAIALENDRLNKQHASMYGTTTLRGGSLYQIRGG--FEQRLPSDFILSMVAGLEKRALEYKKEVDEIDKFLRTAHLDLDAPLET----TYNEVLSRAGGRAAPVR-SGPAHVS-KAKKLEQVIRRMYEYFLLVASQYGNLHDAVDGLKAEYMQWLQETNPDAPDPFEEARRRAVAAKARESM 506          
The following BLAST results are available for this feature:
BLAST of Ggra9546.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IH163.530e-8868.73Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QKY72.540e-7652.00Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4Z7G72.760e-1831.37Nucleoporin p58/p45 n=1 Tax=Porphyridium purpureum... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 173..200
NoneNo IPR availableCOILSCoilCoilcoord: 377..397
NoneNo IPR availableGENE3D6.10.140.1350coord: 243..367
e-value: 1.7E-14
score: 55.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 384..406
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 470..493

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000150_piloncontigtig00000150_pilon:25553..27034 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9546.t1Ggra9546.t1Gracilaria gracilis GNS1m malemRNAtig00000150_pilon 25553..27034 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9546.t1 ID=Ggra9546.t1|Name=Ggra9546.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=494bp
MFGSAQSAPSMFASSQAQPSSLFGGAPSQQQSSSSFLFSGAPPQSSAGSL
FGSAASSSSLFGVAASSSSLFGAAASSSSLFGAPASSSSLFGQPGAPSLF
ASPPAAQTQQAAAQQQQQIEITLRTRITELPPNFQNDLFAVERHLREQRN
KASLLWSKRGDVDAKLLQTKANSADISRLLIKLRAELDALEANATSLKAA
VRLERTSAQPVVTALENLSRRGYSGYLDQNGLPFMDTGGRVHAAHVPKEY
FTRIVEELEGRATEYKAEIDEIAAFLKAQGVMLSSGASGFGNGTNPSLLD
NLSQRYVDIGLSGTDTPSIPTGTIEDIIRRQYEYFMVVASHIAVAHENLR
AAREQFLQVLKERDTDAPNPFQQADMREKVEKDRQRLQSEKRAADGASQF
VNQINSLSQPSSAPGTFVPATGFGASSAAASSTTQASLFQSSATTSSLFG
APAGASAGSSSGGLFGGGFNFGGSSSASATDSEPNRATRRKRE*
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