Ggra9526.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9526.t1
Unique NameGgra9526.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length787
Homology
BLAST of Ggra9526.t1 vs. uniprot
Match: A0A2V3IIC8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIC8_9FLOR)

HSP 1 Score: 173 bits (439), Expect = 1.310e-43
Identity = 113/362 (31.22%), Postives = 174/362 (48.07%), Query Frame = 0
Query:  360 MHGFHNVEFFSQPNKGRTSWYVARPEWWNAYEVPMSLSVPTPPVLAYFGSYITHKHDRYYLIWSIALAEWAVLVAILALQAARDGIDGDCRSREADIYRDGVQPPGRMFFILPRVIRDIRLFGLGTIVAGTDYSIEQLESLLTQVESFPLGANSGVGGFRSGVLEGWSPE----------------------PFPTVMESPA-ATPVVTLVPTPAPEGRNTPAHTGVTPLLPSTTRVDGPPRAILGGVMAAAAAPVLSQVDSQAISGLMARVRQACVVNFQRAGFNSVVEALTLLESILPLHAQYMRSFSQIGEFRNRFQVELHHMATNQVA-------GLATAMDPTPTNSLEGPLFGASL 691
            MHG+H +E+F Q  + R  WYV +P WWN YE P  + VPTP VLAYFG         Y+ IWS+A+ +WAVLV++LAL+A R  I  +    E   Y    QP GR++ +  ++I+ IR  G+  IVA T Y+   L++ L   E+   G +         V E W  +                       +  V+E+P   T   ++ PT    G++ P     T  +P   R    P  ++   +          V +  ++  + R++Q CV   +R G  S+ EALT+LE+++  HA Y+ + +Q+G FR  FQ EL+   T+ V        G ++  DP    +LEGPL  + +
Sbjct:    1 MHGYHLIEYFPQSTEARRQWYVQQPRWWNEYEAPQWVLVPTPLVLAYFGRLTREGSPCYHTIWSVAMCKWAVLVSMLALEAGRHDITWNLPCPETAFYSHEFQPVGRLYRLPMQLIQLIRCLGISDIVARTGYTENHLDNYLRAAENHRWGPDQ--------VCEVWDHDRQRVSSPGDQALPGDDHMGEEAQYGCVVETPEDLTYTASMAPT---SGQHPPVPPSNTTPVPRRGRFQ--PIGLVSNPIGGG-----EHVTAPEVTDTLMRIQQLCVTRLKRPGLRSIQEALTILEALITRHATYVETLNQVGGFRTNFQAELYRAVTHHVGELSDLLRGASSTGDPL-MGTLEGPLLASGV 343          
BLAST of Ggra9526.t1 vs. uniprot
Match: A0A2V3IV02 (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV02_9FLOR)

HSP 1 Score: 107 bits (267), Expect = 3.160e-20
Identity = 85/292 (29.11%), Postives = 139/292 (47.60%), Query Frame = 0
Query:  221 VLRRPTLDTYLGLFRWDCEHLRSVLQTLHRRDKESQPRQGRGECYDSRPRHTPMRYFIPP---LYPSDLPYVRIESKLHYYRR---LVVKICQYDSLPQQYLPASP-HLICFDRPYNTIHWANRRRWGVDAATEARIRTRSSFNRVMHGFHNVEFFSQPNKGRTSWYVARPEWWNAYEVPMSLSVPTPPVLAYFGSYITHKHDRYYLIWSIALAEWAVLVAILALQAARDGIDGDCRSRE--ADIYR------DGVQPPG--RMFFILPRVIRDIRLFGLGTIVAGTDYSIE 495
            ++  P L  +L   R+    +R     L  R+    P+  RGE +  R RH      +     +   D+P++R   +     R   L+ ++      P     ++P  L+ F RPY+ ++W NRRRWG + ATEAR+R  S+ +  M  + N+EFF      R   YV  P+ W  ++V   LSV  PPVLAY+   +  +      +  IA+AEWAV   +  LQAA +G+    R+ +   + +R      +  +PPG  R+F +   ++  +   GL  ++ GT Y+ E
Sbjct:  136 LINAPDLPDFLDAKRFAAIPVRRSFFELTGRN----PKHTRGEAWAQRWRHLQGIAGLQSDTTVGSCDMPFLRCPEEYQCQARMRDLIGRMATDVDFPSA--DSNPLQLVMFSRPYDRMYWLNRRRWGDNIATEARLR--SNRDGYMFCWQNIEFFDVSPADREKLYVRAPQNWGEFDVTRDLSVIIPPVLAYYSGEVLRESALSERVMRIAIAEWAVCALMAFLQAASEGVRVFTRTEDPRVNFFRGFPRQPNTREPPGLGRLFPLPYGLVSLVMQMGLENVLRGTIYATE 419          
The following BLAST results are available for this feature:
BLAST of Ggra9526.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IIC81.310e-4331.22Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IV023.160e-2029.11Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 708..786
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..151
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 757..771
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..418
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 439..786
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 419..438

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000873_piloncontigtig00000873_pilon:452305..454720 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9526.t1Ggra9526.t1Gracilaria gracilis GNS1m malemRNAtig00000873_pilon 452305..454720 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9526.t1 ID=Ggra9526.t1|Name=Ggra9526.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=787bp
MVTPDPYLNHMGSPGTSVRARTRSGTWRLSVPHVGQSDAVTSRDGAPSAT
NADTLMVEPAWGPEWVEVLSISSSDSPIVDKKPIRFTPAVECSPSQPLPH
GTHHTMSGAGASRGRGSGIAKSGSRGAALYHSRIQTGFRSQPVQSSSHQP
EGIHEGIRDPYGPEPEIPRGISYYGLETFTTADWNVSQHGTFGVDPRMVS
QATLYRRNWPVAPGNTSLPGVLRRPTLDTYLGLFRWDCEHLRSVLQTLHR
RDKESQPRQGRGECYDSRPRHTPMRYFIPPLYPSDLPYVRIESKLHYYRR
LVVKICQYDSLPQQYLPASPHLICFDRPYNTIHWANRRRWGVDAATEARI
RTRSSFNRVMHGFHNVEFFSQPNKGRTSWYVARPEWWNAYEVPMSLSVPT
PPVLAYFGSYITHKHDRYYLIWSIALAEWAVLVAILALQAARDGIDGDCR
SREADIYRDGVQPPGRMFFILPRVIRDIRLFGLGTIVAGTDYSIEQLESL
LTQVESFPLGANSGVGGFRSGVLEGWSPEPFPTVMESPAATPVVTLVPTP
APEGRNTPAHTGVTPLLPSTTRVDGPPRAILGGVMAAAAAPVLSQVDSQA
ISGLMARVRQACVVNFQRAGFNSVVEALTLLESILPLHAQYMRSFSQIGE
FRNRFQVELHHMATNQVAGLATAMDPTPTNSLEGPLFGASLNPGLLTAPQ
APLHIGSSVPPSVAQANAPTPMGPEVLPGVSVPTSTPVGHGSAPSQAPGQ
AHLFQPWLGAHQNTTPGRGSSAGGSLGPHFATHPSG*
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