Ggra9511.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9511.t1
Unique NameGgra9511.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length267
Homology
BLAST of Ggra9511.t1 vs. uniprot
Match: A0A2V3IJH2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJH2_9FLOR)

HSP 1 Score: 182 bits (463), Expect = 1.710e-49
Identity = 106/298 (35.57%), Postives = 166/298 (55.70%), Query Frame = 0
Query:    1 MSRKFRCYAIVSALPETALNAIRIA-ADEVTVLPKDRRRMLRDVCEMFRREVDQYRSGRWMRSEEISAIPTPLWSSVVLDMASNKQLAAWKVSAAARNVRITQSFPVGNAIETLPARELDCYA---------QLSSQSTFL-----------------------------IANILEGSASWTGVLHALGICMSYQSTERIGKKLVAEREQSESGAFENIDTSKNVVSVQIDNFDIMPFNSVKASGERIPLISGTATQSIVRPKKAEHTLYPNGKTQTQG--------SASRWLSKEEV 251
            +SRK RCYA   A  ++    + I+ +DEVT++P  RR +L  V   F  +   +R+G W+ SEE+ AIP  LW++ +LDMASNKQLA WKV AAAR  +    FP+ N   +LPA +L+ +          +L S++ F+                             IA I+E +ASW  VLHALG+  SY   E   ++L+++REQ+E GAF+++     +V+VQ+DN D++P ++VKA GE +P++ GTATQ I++ +K +     N  T+T          + ++WL  +++
Sbjct:  199 LSRKLRCYATQEAFSQSINGLMGISESDEVTLMPIKRRELLSAVDTRFLAKSKVFRNGSWLLSEEVQAIPQKLWTATLLDMASNKQLAVWKVEAAARKKKFRNIFPISNDARSLPAEQLNNFVAIFRSSKKTELISRADFMLCMRVLKVIEQMVMSRSRVCVGPLTTMLSIAGIIEFTASWRSVLHALGLVTSYDRAETFRRRLISKREQAERGAFDSVRLEDRIVTVQLDNVDMLPVHNVKAFGESLPILIGTATQGIIQCRKRKRV---NDSTETSTMTENRKDVNPNKWLRPKDI 493          
BLAST of Ggra9511.t1 vs. uniprot
Match: A0A2V3IY08 (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY08_9FLOR)

HSP 1 Score: 178 bits (451), Expect = 4.220e-47
Identity = 98/239 (41.00%), Postives = 138/239 (57.74%), Query Frame = 0
Query:   27 DEVTVLPKDRRRMLRDVCEMFRREVDQYRSGRWMRSEEISAIPTPLWSSVVLDMASNKQLAAWKVSAAARNVRITQSFPVGNAIETLPARELDCYAQLS-------------------------------SQS---------TFLIANILEGSASWTGVLHALGICMSYQSTERIGKKLVAEREQSESGAFENIDTSKNVVSVQIDNFDIMPFNSVKASGERIPLISGTATQSIVRPKK 225
            + VT+  K++R+ML +    F R  ++Y  G W  S+EI+A+P  LW+S +L+MAS KQL +WKV+AAA   ++   FPV N    +P  E D +AQ                                 SQS         T  IA I E S SWT VLH+LG+  SY + E   K L+A+REQS  GAFE ++T+  +VS+Q+DNFDI+PF+S+KASG+ +P++SGTATQ IV+ +K
Sbjct:  411 ESVTITLKEKRKMLAETGNRFMRSKEKYYRGDWSLSDEIAAVPPRLWASFILEMASEKQLLSWKVAAAAIGKKVVDMFPVLNDFTNIPREEFDNFAQQRFVHKRADETGLRRVDFLLCIRALKVIEQMTYSQSRLRIGPLTMTLSIAGIAESSPSWTSVLHSLGLATSYDAMESFKKSLIAKREQSTRGAFEGVNTTDRLVSIQLDNFDILPFHSMKASGKALPMVSGTATQGIVQSRK 649          
BLAST of Ggra9511.t1 vs. uniprot
Match: R7QLN2 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLN2_CHOCR)

HSP 1 Score: 110 bits (275), Expect = 1.060e-23
Identity = 84/298 (28.19%), Postives = 139/298 (46.64%), Query Frame = 0
Query:    1 MSRKFRCYAIVSA----LPETALNAIRIAADEVTVLPKDRRRMLRDVCEMFRREVDQYRSGRWMRSEEISAIPTPLWSSVVLDMASNKQLAAWKVSAAARNVRITQSFPVGNAIETLP----ARELDCYAQLSSQSTFL----------------------------IANILEGSASWTGVLHALGICMSYQSTERIGKKLVAEREQSESGAFENIDTSKNVVSV-QIDNFDIMPFNSVKASGERIPLISGTATQSIVRPKKAEHTLYPNGKTQTQGSASRWLSKEEVQCLSNREAFV 261
            MS + RCY  VS     L + A +  +   +       + R     +   F     ++ +G W  +EE+++IP+PLW  V+L MAS+ +L AWKV A     ++ + FP+ N+ + LP      EL    Q S     L                            ++ I E + S+  VL+A+G+ +SY STER  +KL+AERE+   G +++    + ++ V Q DN+DI P ++VK  G+ +P ++G+  Q +V  +K          T+     S W S   + C   R+AF+
Sbjct:   99 MSYRLRCYIHVSQVDKFLSDIATSRSKKLINNARPSMDEMRSHYDAIARHFEEHKGRFWAGSWSLTEEVASIPSPLWQDVMLTMASDSRLRAWKVCARVLGTQMYEMFPLSNSPDCLPHPSIEEELHNGTQYSRADLLLCVRALKVIEQTVLSRTKSISGPLTITISVSGICEVTPSFISVLNAMGVFLSYTSTERYRQKLIAERERC--GPWQHTKFDEVIMPVLQFDNWDIKPLHAVKVDGKSMPKVNGSLLQGVVPGQKRRRENIAEHSTKRPRLDS-WKSVRGLGC---RDAFI 390          
BLAST of Ggra9511.t1 vs. uniprot
Match: A0A2V3IKL7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKL7_9FLOR)

HSP 1 Score: 93.2 bits (230), Expect = 8.610e-18
Identity = 52/130 (40.00%), Postives = 80/130 (61.54%), Query Frame = 0
Query:  132 IANILEGSASWTGVLHALGICMSYQSTERIGKKLVAEREQSESGAFENIDTSKNVVSVQIDNFDIMPFNSVKASGERIPLISGTATQSIVRPKKAEHTLYPNGKTQTQGSASRWLSKEEVQCLSNREAFV 261
            IA+ILE + SWT  L+ALGI  SY + ER   +L ++ E +   A  ++  S  +++VQIDN+D+MP +SVK +G++ P+ISGTATQ ++R ++   T   N    T  + S+W   + V  L  RE F+
Sbjct:   69 IADILENTPSWTSFLNALGIKTSYDTLERYKNRLASDHESAPRRALSDVPLSDGLLTVQIDNYDVMPLHSVKIAGKKNPVISGTATQGVLRKRRWGATRDENFSKFT--TYSQWQDPKRV--LGTRENFI 194          
BLAST of Ggra9511.t1 vs. uniprot
Match: A0A2V3IHR6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHR6_9FLOR)

HSP 1 Score: 68.2 bits (165), Expect = 1.890e-9
Identity = 37/89 (41.57%), Postives = 51/89 (57.30%), Query Frame = 0
Query:   36 RRRMLRDVCEMFRREVDQYRSGRWMRSEEISAIPTPLWSSVVLDMASNKQLAAWKVSAAARNVRITQSFPVGNAIETLPARELDCYAQL 124
            RR++L  V + F+   D+Y SG W  S EI+AIP PLW+  VL+MASN +L  W ++A      +   FPV N IE  P   ++   QL
Sbjct:  276 RRKLLDTVAKNFKMGRDRYWSGCWSLSHEIAAIPQPLWTHFVLEMASNNRLLFWGMTAKEAKKDLLHMFPVCNCIEHHPNDSIEIVLQL 364          
The following BLAST results are available for this feature:
BLAST of Ggra9511.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IJH21.710e-4935.57Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IY084.220e-4741.00Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
R7QLN21.060e-2328.19Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IKL78.610e-1840.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IHR61.890e-941.57Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..266
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000873_piloncontigtig00000873_pilon:354831..355631 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9511.t1Ggra9511.t1Gracilaria gracilis GNS1m malemRNAtig00000873_pilon 354831..355631 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9511.t1 ID=Ggra9511.t1|Name=Ggra9511.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=267bp
MSRKFRCYAIVSALPETALNAIRIAADEVTVLPKDRRRMLRDVCEMFRRE
VDQYRSGRWMRSEEISAIPTPLWSSVVLDMASNKQLAAWKVSAAARNVRI
TQSFPVGNAIETLPARELDCYAQLSSQSTFLIANILEGSASWTGVLHALG
ICMSYQSTERIGKKLVAEREQSESGAFENIDTSKNVVSVQIDNFDIMPFN
SVKASGERIPLISGTATQSIVRPKKAEHTLYPNGKTQTQGSASRWLSKEE
VQCLSNREAFVKINTL*
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