Ggra9510.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9510.t1
Unique NameGgra9510.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length205
Homology
BLAST of Ggra9510.t1 vs. uniprot
Match: A0A2V3J6M2 (Proteasome subunit beta n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6M2_9FLOR)

HSP 1 Score: 391 bits (1004), Expect = 2.590e-137
Identity = 193/204 (94.61%), Postives = 199/204 (97.55%), Query Frame = 0
Query:    1 MSILEYNGGCVLAMAGKNCVAIASDKRLGVQLTTVAMDANRIFPMHDKLYLGLTGLMTDITTLDQLFRFKLELYAMRENRLMKPKTFASLVSSTLYSKRFAPYFSEPVIAGLDSDNKPYICSMDLLGCIAEETDFCVAGTCAESLFGTCETFYKKDLEPDELFETMSQALLAALDRDCISGWGAVVHIISKDGVETRELDGRMD 204
            MSILEYNGGCVLAMAGK CVAIASDKRLGVQLTTVAMDANRIF MHDKLYLGLTGLMTDI TLDQLFRFKLELYAMRENRLMKPKTFASLVSSTLYSKRFAPYFSEPVIAGLD DNKPYICSMDLLGC+AEET+F VAGTCAESLFGTCETFYKKDLEPDELFET+SQALLAALDRDCISGWGAVVHII+KDGV+T+ELDGRMD
Sbjct:    1 MSILEYNGGCVLAMAGKECVAIASDKRLGVQLTTVAMDANRIFRMHDKLYLGLTGLMTDIQTLDQLFRFKLELYAMRENRLMKPKTFASLVSSTLYSKRFAPYFSEPVIAGLDKDNKPYICSMDLLGCVAEETEFVVAGTCAESLFGTCETFYKKDLEPDELFETVSQALLAALDRDCISGWGAVVHIITKDGVQTKELDGRMD 204          
BLAST of Ggra9510.t1 vs. uniprot
Match: R7QTK3 (Proteasome subunit beta n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QTK3_CHOCR)

HSP 1 Score: 362 bits (930), Expect = 4.940e-126
Identity = 175/204 (85.78%), Postives = 191/204 (93.63%), Query Frame = 0
Query:    1 MSILEYNGGCVLAMAGKNCVAIASDKRLGVQLTTVAMDANRIFPMHDKLYLGLTGLMTDITTLDQLFRFKLELYAMRENRLMKPKTFASLVSSTLYSKRFAPYFSEPVIAGLDSDNKPYICSMDLLGCIAEETDFCVAGTCAESLFGTCETFYKKDLEPDELFETMSQALLAALDRDCISGWGAVVHIISKDGVETRELDGRMD 204
            MSILEYNGGCV+AMAGK+CVAIASD RLGVQLTTVAMDA RIFPMHDKLYLGLTGLMTDITTLDQLFRF+LE+Y MRENR +KPKTF++LVSSTLY KRF PYFSEPVIAGLD DNKP++CSMDLLGCIAE  DF VAGTCAESL GTCETFY+ +LEP++LFET+SQ+LLAALDRDCISGWGAVVHII+KDGV TRELDGRMD
Sbjct:    1 MSILEYNGGCVIAMAGKDCVAIASDHRLGVQLTTVAMDATRIFPMHDKLYLGLTGLMTDITTLDQLFRFRLEMYEMRENRKIKPKTFSNLVSSTLYGKRFGPYFSEPVIAGLDKDNKPFLCSMDLLGCIAEADDFAVAGTCAESLLGTCETFYRPNLEPEDLFETVSQSLLAALDRDCISGWGAVVHIITKDGVTTRELDGRMD 204          
BLAST of Ggra9510.t1 vs. uniprot
Match: A0A1X6NP67 (Proteasome subunit beta n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NP67_PORUM)

HSP 1 Score: 321 bits (822), Expect = 1.410e-109
Identity = 153/204 (75.00%), Postives = 175/204 (85.78%), Query Frame = 0
Query:    1 MSILEYNGGCVLAMAGKNCVAIASDKRLGVQLTTVAMDANRIFPMHDKLYLGLTGLMTDITTLDQLFRFKLELYAMRENRLMKPKTFASLVSSTLYSKRFAPYFSEPVIAGLDSDNKPYICSMDLLGCIAEETDFCVAGTCAESLFGTCETFYKKDLEPDELFETMSQALLAALDRDCISGWGAVVHIISKDGVETRELDGRMD 204
            MSILEYNGGCV+AMAGKNCVAIASDKRLGVQL+T+AMD NR+FPM D LYLGLTGL TD+TTL  LF FKL LYAMRE R +KP TFASLVSSTLY KRF PYF+EPVIAGL +D  P++C+MDLLG +A   DF V+GTCAESLFGTCETF++KD+ PDELFET+ Q+L+AALDRDCISGWG  VHII+K+GV T+ L  RMD
Sbjct:    1 MSILEYNGGCVVAMAGKNCVAIASDKRLGVQLSTIAMDCNRVFPMTDSLYLGLTGLHTDVTTLHNLFNFKLNLYAMREGRTIKPTTFASLVSSTLYEKRFGPYFAEPVIAGLQADGTPFLCAMDLLGAMAVADDFVVSGTCAESLFGTCETFFRKDMNPDELFETLGQSLMAALDRDCISGWGVDVHIITKEGVTTKSLKARMD 204          
BLAST of Ggra9510.t1 vs. uniprot
Match: A0A5J4Z100 (Proteasome subunit beta n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z100_PORPP)

HSP 1 Score: 310 bits (793), Expect = 3.690e-105
Identity = 147/204 (72.06%), Postives = 173/204 (84.80%), Query Frame = 0
Query:    1 MSILEYNGGCVLAMAGKNCVAIASDKRLGVQLTTVAMDANRIFPMHDKLYLGLTGLMTDITTLDQLFRFKLELYAMRENRLMKPKTFASLVSSTLYSKRFAPYFSEPVIAGLDSDNKPYICSMDLLGCIAEETDFCVAGTCAESLFGTCETFYKKDLEPDELFETMSQALLAALDRDCISGWGAVVHIISKDGVETRELDGRMD 204
            MSILEYNGGCV+AMAGK CVAIA+D+RLG+QL T+A DANR+F MHDKL+LGLTGLMTDIT+L   F FKL +Y+MRE RLM P+TF+SLV+STLY KRF PYFSEPVIAGL+ DN P++C+MDLLG  A   DF V+GTCAESLFGTCETFY+ DL PD+LFET+SQA+L+ALDRDCISGWG  VHII+ +GV  + L  RMD
Sbjct:    1 MSILEYNGGCVVAMAGKECVAIAADRRLGIQLQTLACDANRVFRMHDKLFLGLTGLMTDITSLHNSFDFKLNMYSMREGRLMSPQTFSSLVASTLYEKRFGPYFSEPVIAGLNKDNTPFLCAMDLLGAAAYADDFVVSGTCAESLFGTCETFYRPDLGPDDLFETISQAMLSALDRDCISGWGVTVHIITPEGVTAKSLKARMD 204          
BLAST of Ggra9510.t1 vs. uniprot
Match: A0A7S1FMY7 (Proteasome subunit beta n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FMY7_9STRA)

HSP 1 Score: 273 bits (699), Expect = 7.520e-91
Identity = 128/204 (62.75%), Postives = 160/204 (78.43%), Query Frame = 0
Query:    1 MSILEYNGGCVLAMAGKNCVAIASDKRLGVQLTTVAMDANRIFPMHDKLYLGLTGLMTDITTLDQLFRFKLELYAMRENRLMKPKTFASLVSSTLYSKRFAPYFSEPVIAGLDSDNKPYICSMDLLGCIAEETDFCVAGTCAESLFGTCETFYKKDLEPDELFETMSQALLAALDRDCISGWGAVVHIISKDGVETRELDGRMD 204
            MSILEYNGG ++AMAGK+CVAIASD RLG+ + TVA D  ++F M+++LY+GL GL TD+ TLDQL RF+ ELY +RE R MKPKTF++L+S+ LY KRF PYF EPV+AGLD  NKP++  MDL+G      DF V GTC E+L+G CET YK DL P+ELFET+SQ LL+A+DRD +SGWGAVVH+I+  GV +REL GR D
Sbjct:    1 MSILEYNGGAIIAMAGKDCVAIASDTRLGINMQTVATDFKKVFKMNERLYVGLAGLATDVQTLDQLLRFRSELYELREERKMKPKTFSNLLSTMLYEKRFGPYFCEPVVAGLDEKNKPFLSGMDLIGATVIADDFVVTGTCTENLYGMCETLYKPDLGPEELFETISQCLLSAVDRDAMSGWGAVVHVITPKGVTSRELKGRQD 204          
BLAST of Ggra9510.t1 vs. uniprot
Match: A0A0L0T0X0 (Proteasome subunit beta n=2 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0T0X0_ALLM3)

HSP 1 Score: 272 bits (695), Expect = 3.050e-90
Identity = 129/204 (63.24%), Postives = 161/204 (78.92%), Query Frame = 0
Query:    1 MSILEYNGGCVLAMAGKNCVAIASDKRLGVQLTTVAMDANRIFPMHDKLYLGLTGLMTDITTLDQLFRFKLELYAMRENRLMKPKTFASLVSSTLYSKRFAPYFSEPVIAGLDSDNKPYICSMDLLGCIAEETDFCVAGTCAESLFGTCETFYKKDLEPDELFETMSQALLAALDRDCISGWGAVVHIISKDGVETRELDGRMD 204
            MSI+EYNGG V+AM GKNCVA+A+D+R GVQL TV+ D  + F +HDKL+ GL GL TD+ TL + FR K  LY +RE R M+P+TFA +VSSTLY KRF PYF+EPVIAGLD +N+P++CSMDL+GCI    DF VAGT   +L+G CE+ +++DLEP+ELFE  SQALL A+DRDCISGWGAVVHII+ + + TR L GRMD
Sbjct:    1 MSIMEYNGGSVVAMKGKNCVAVAADRRFGVQLLTVSTDFQKTFKVHDKLFYGLAGLGTDVQTLSEKFRMKSNLYKLREERPMEPRTFAHMVSSTLYEKRFGPYFAEPVIAGLDKNNEPFVCSMDLIGCINFAKDFVVAGTAGPNLYGMCESLWREDLEPEELFEITSQALLNAVDRDCISGWGAVVHIITPEKIITRTLKGRMD 204          
BLAST of Ggra9510.t1 vs. uniprot
Match: A0A7S0BEU4 (Proteasome subunit beta n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BEU4_9RHOD)

HSP 1 Score: 271 bits (694), Expect = 4.480e-90
Identity = 129/203 (63.55%), Postives = 154/203 (75.86%), Query Frame = 0
Query:    2 SILEYNGGCVLAMAGKNCVAIASDKRLGVQLTTVAMDANRIFPMHDKLYLGLTGLMTDITTLDQLFRFKLELYAMRENRLMKPKTFASLVSSTLYSKRFAPYFSEPVIAGLDSDNKPYICSMDLLGCIAEETDFCVAGTCAESLFGTCETFYKKDLEPDELFETMSQALLAALDRDCISGWGAVVHIISKDGVETRELDGRMD 204
            SILEYNGG V+AM+G  CVAIASD RLG Q  T+AMD  RIF MHD+L+LGLTGL TD  TL  LF+FKL +Y MRE R + P+TFA+LVSSTLY KRF PYF+EP++ GLD DNKPY+C MDLLG +A E DF   GT  E L G CETFY++++   +LFE +SQ L+ A DRDC+SGWG VVHIISKDG+ T+ L  R D
Sbjct:    3 SILEYNGGTVVAMSGDGCVAIASDTRLGQQYQTIAMDVPRIFKMHDRLFLGLTGLYTDTQTLHNLFKFKLSMYKMREGREISPETFANLVSSTLYEKRFGPYFTEPIVVGLDKDNKPYLCGMDLLGALACEPDFVTLGTSTEMLLGACETFYRENMSEGQLFEVVSQTLMMATDRDCLSGWGGVVHIISKDGITTKTLKTRQD 205          
BLAST of Ggra9510.t1 vs. uniprot
Match: B8LDK1 (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LDK1_THAPS)

HSP 1 Score: 268 bits (686), Expect = 7.140e-89
Identity = 122/204 (59.80%), Postives = 163/204 (79.90%), Query Frame = 0
Query:    1 MSILEYNGGCVLAMAGKNCVAIASDKRLGVQLTTVAMDANRIFPMHDKLYLGLTGLMTDITTLDQLFRFKLELYAMRENRLMKPKTFASLVSSTLYSKRFAPYFSEPVIAGLDSDNKPYICSMDLLGCIAEETDFCVAGTCAESLFGTCETFYKKDLEPDELFETMSQALLAALDRDCISGWGAVVHIISKDGVETRELDGRMD 204
            MSILEYNG  ++AM+GK+CV IASD R+G+   TV+MD  +IF M++KL++GL GL +D+ TLDQL RF++ LY +RE R M PK F +L+S+ LY KRF PYF+EPV+AGLD ++KPY+ +MDL+G  +   DF VAGTCA +L+G CET YKKD+E +ELFET++QALLA++DRD +SGWG VVHII+K+G+ +REL GR D
Sbjct:    1 MSILEYNGAAIIAMSGKDCVGIASDNRMGISYQTVSMDFKKIFQMNEKLFVGLAGLASDVQTLDQLLRFRMNLYELREEREMTPKVFTNLLSNMLYEKRFGPYFAEPVVAGLDENDKPYLATMDLIGATSSTEDFVVAGTCAGNLYGMCETLYKKDMEQEELFETLAQALLASVDRDALSGWGGVVHIITKEGIISRELKGRQD 204          
BLAST of Ggra9510.t1 vs. uniprot
Match: A0A388JS72 (Proteasome subunit beta n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JS72_CHABU)

HSP 1 Score: 268 bits (686), Expect = 7.140e-89
Identity = 127/204 (62.25%), Postives = 161/204 (78.92%), Query Frame = 0
Query:    1 MSILEYNGGCVLAMAGKNCVAIASDKRLGVQLTTVAMDANRIFPMHDKLYLGLTGLMTDITTLDQLFRFKLELYAMRENRLMKPKTFASLVSSTLYSKRFAPYFSEPVIAGLDSDNKPYICSMDLLGCIAEETDFCVAGTCAESLFGTCETFYKKDLEPDELFETMSQALLAALDRDCISGWGAVVHIISKDGVETRELDGRMD 204
            MSIL YNGG ++AM GKNC AIASD+R GVQL T+A D  RIF +HD+LY+GL+GL TD+ TL Q  +F+ +LY +RE R MKPKTFASLVS  LY KRF PYF EPVIAGLD D KP+IC+ DLLG     +DF V+GT +ESL+G CE+ ++ D+EP++LFET+SQALL+++DRDC+SGWG +V+I++ D V TR L GRMD
Sbjct:    1 MSILSYNGGAIVAMVGKNCFAIASDRRFGVQLQTIATDFQRIFKIHDRLYIGLSGLGTDVQTLYQRLQFRHKLYRLREERDMKPKTFASLVSGILYEKRFGPYFCEPVIAGLDDDGKPFICTTDLLGAKQFSSDFVVSGTSSESLYGACESMFRPDMEPEDLFETISQALLSSVDRDCLSGWGGIVYIVTPDEVITRTLKGRMD 204          
BLAST of Ggra9510.t1 vs. uniprot
Match: A0A0U9HHU3 (Proteasome subunit beta n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HHU3_KLENI)

HSP 1 Score: 267 bits (682), Expect = 2.900e-88
Identity = 126/204 (61.76%), Postives = 162/204 (79.41%), Query Frame = 0
Query:    1 MSILEYNGGCVLAMAGKNCVAIASDKRLGVQLTTVAMDANRIFPMHDKLYLGLTGLMTDITTLDQLFRFKLELYAMRENRLMKPKTFASLVSSTLYSKRFAPYFSEPVIAGLDSDNKPYICSMDLLGCIAEETDFCVAGTCAESLFGTCETFYKKDLEPDELFETMSQALLAALDRDCISGWGAVVHIISKDGVETRELDGRMD 204
            MSIL YNG  ++AM GKNC AIASD+RLG+Q  T+A D  RIF +HDKLY+GL+GL +D+ TL + F F+ +LY +RE R MKP TFA+LVSS LY KRF PYF+EPVIAGL+SD  P+IC+MDLLG     +DF V+GT +ESL+G CE+ Y+ DLEP++LFE +SQALL+++DRDC+SGWG +VHI+S++ V TR L GRMD
Sbjct:    1 MSILTYNGSAIIAMMGKNCFAIASDRRLGIQQQTLATDFQRIFKIHDKLYIGLSGLASDVQTLHERFVFRHKLYKLREERDMKPSTFANLVSSMLYEKRFGPYFAEPVIAGLNSDGSPFICTMDLLGAKQFSSDFVVSGTASESLYGACESMYRPDLEPEDLFEVISQALLSSVDRDCLSGWGGIVHIVSENEVITRTLKGRMD 204          
The following BLAST results are available for this feature:
BLAST of Ggra9510.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J6M22.590e-13794.61Proteasome subunit beta n=1 Tax=Gracilariopsis cho... [more]
R7QTK34.940e-12685.78Proteasome subunit beta n=1 Tax=Chondrus crispus T... [more]
A0A1X6NP671.410e-10975.00Proteasome subunit beta n=1 Tax=Porphyra umbilical... [more]
A0A5J4Z1003.690e-10572.06Proteasome subunit beta n=1 Tax=Porphyridium purpu... [more]
A0A7S1FMY77.520e-9162.75Proteasome subunit beta n=2 Tax=Corethron hystrix ... [more]
A0A0L0T0X03.050e-9063.24Proteasome subunit beta n=2 Tax=Allomyces macrogyn... [more]
A0A7S0BEU44.480e-9063.55Proteasome subunit beta n=4 Tax=Rhodosorus marinus... [more]
B8LDK17.140e-8959.80Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
A0A388JS727.140e-8962.25Proteasome subunit beta n=1 Tax=Chara braunii TaxI... [more]
A0A0U9HHU32.900e-8861.76Proteasome subunit beta n=1 Tax=Klebsormidium nite... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029055Nucleophile aminohydrolases, N-terminalGENE3D3.60.20.10Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1coord: 1..204
e-value: 5.3E-57
score: 194.6
IPR029055Nucleophile aminohydrolases, N-terminalSUPERFAMILY56235N-terminal nucleophile aminohydrolases (Ntn hydrolases)coord: 4..204
IPR001353Proteasome, subunit alpha/betaPFAMPF00227Proteasomecoord: 7..189
e-value: 1.8E-41
score: 141.8
NoneNo IPR availablePANTHERPTHR11599PROTEASOME SUBUNIT ALPHA/BETAcoord: 4..197
IPR033811Proteasome beta 3 subunitPANTHERPTHR11599:SF62PROTEASOME SUBUNIT BETA TYPE-3coord: 4..197
IPR033811Proteasome beta 3 subunitCDDcd03759proteasome_beta_type_3coord: 6..199
e-value: 2.61307E-119
score: 334.596
IPR016050Proteasome beta-type subunit, conserved sitePROSITEPS00854PROTEASOME_BETA_1coord: 12..59
IPR023333Proteasome B-type subunitPROSITEPS51476PROTEASOME_BETA_2coord: 8..189
score: 46.785397

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000873_piloncontigtig00000873_pilon:351047..351814 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9510.t1Ggra9510.t1Gracilaria gracilis GNS1m malemRNAtig00000873_pilon 351047..351814 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9510.t1 ID=Ggra9510.t1|Name=Ggra9510.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=205bp
MSILEYNGGCVLAMAGKNCVAIASDKRLGVQLTTVAMDANRIFPMHDKLY
LGLTGLMTDITTLDQLFRFKLELYAMRENRLMKPKTFASLVSSTLYSKRF
APYFSEPVIAGLDSDNKPYICSMDLLGCIAEETDFCVAGTCAESLFGTCE
TFYKKDLEPDELFETMSQALLAALDRDCISGWGAVVHIISKDGVETRELD
GRMD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029055Ntn_hydrolases_N
IPR001353Proteasome_sua/b
IPR033811Proteasome_beta_3
IPR016050Proteasome_bsu_CS
IPR023333Proteasome_suB-type