Ggra9500.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9500.t1
Unique NameGgra9500.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length210
Homology
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BLAST of Ggra9500.t1 vs. uniprot
Match: A0A2V3J5L9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5L9_9FLOR)

HSP 1 Score: 108 bits (271), Expect = 6.820e-27
Identity = 55/65 (84.62%), Postives = 60/65 (92.31%), Query Frame = 0 
Query:   10 SAAELTRQKLSETEPLVKFRRQTEYLDEDTSFTYTRGVKKGSVDIWLITGVLTFLVPLIGFAIGV 74
            SAAE TR++L E+EPLVKFR+QTEYLD DTSF YT GVKKGSVDIWLITGVLTFLVPL+GFAIGV
Sbjct:   60 SAAERTRRQLQESEPLVKFRKQTEYLDRDTSFRYTSGVKKGSVDIWLITGVLTFLVPLVGFAIGV 124
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BLAST of Ggra9500.t1 vs. uniprot
Match: A0A5J4YLG3 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YLG3_PORPP)

HSP 1 Score: 60.5 bits (145), Expect = 2.890e-8
Identity = 37/68 (54.41%), Postives = 45/68 (66.18%), Query Frame = 0 
Query:    8 KPSAAELTRQKLSETEPLVKFRRQTEYLDEDTSFTYTRGVKKGSVDIWLITGVLTFLVPLIGFAIGVA 75
            K   AE TR+ L+  EP V+FRR+   LD   SF+Y  GVK G VDIWLI G+L+F+VP   FA GVA
Sbjct:   64 KADKAEATRRMLAADEPQVRFRREETQLDSG-SFSYQSGVKDG-VDIWLIVGILSFVVPACIFAYGVA 129
The following BLAST results are available for this feature:
BLAST of Ggra9500.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J5L96.820e-2784.62Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A5J4YLG32.890e-854.41Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 76..95
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 54..75
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..53
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 120..124
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 145..209
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 96..119
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 125..144
NoneNo IPR availableTMHMMTMhelixcoord: 54..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000873_piloncontigtig00000873_pilon:294914..298043 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9500.t1Ggra9500.t1Gracilaria gracilis GNS1m malemRNAtig00000873_pilon 294914..298043 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9500.t1 ID=Ggra9500.t1|Name=Ggra9500.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=210bp
MCETRGQKPSAAELTRQKLSETEPLVKFRRQTEYLDEDTSFTYTRGVKKG
SVDIWLITGVLTFLVPLIGFAIGVATDAELLREAHARRPRCACKELYVLG
VSDIRGAQLPVWMITFQVVDLREGFPWGETVSVMVLFVLLDQYVQDLKAK
NDVWCRYNRDTHADRIRSGFVEMVRNVFAGNAPRQEVPQVWLLAMLECAV
ERDQRVESD*
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