Ggra9498.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9498.t1
Unique NameGgra9498.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length591
Homology
BLAST of Ggra9498.t1 vs. uniprot
Match: A0A2V3J5S0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5S0_9FLOR)

HSP 1 Score: 392 bits (1007), Expect = 3.940e-126
Identity = 255/594 (42.93%), Postives = 373/594 (62.79%), Query Frame = 0
Query:    4 SHLAALHSRIQQLEADNASLASAAEQAAVLAEEYAADAARYRHSQNHTEQRLHDEISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVSTQMEATLQASVSALQQQMEDSSQSVRP-VGDASFLLHTIRAQYAAVPLELLNSYFPQPDPLAGDIRAYQLFLRAHSIHTIATYTQQHTLNPVPDPQQSSS-SQQTFVQNALHLFGKLAWVMQDLLAWCFEKADDMPHRAVKLYEATLTLEQRAANVFEQLFEMQQQRISTSCTPEYGTMNTELLEMAMDAVTDLLPSSSISASSRGKETDLSALIQQGAEERARIVREGLINASRNAEASDQLEGKLNAARTKLRQRESELDDMKVRLSVYEDRMTKAREDAKLVETLKTQVSKLEEEVAEATIRDTPSESVRTIAEANSMTSQGKHTSQADNETSSTDQAIHSSKSC-----IATPLAQLQQVQDVIHVRRQLLRTYLSDIQSDTSTSR--QPRVDLHSMLHVRDTLSHALNDLRTAAANASVVTLHTDTLSVKRSGKSMSQKILLQAMAASCSNEDTLKQWRIERERVCDSKTVKIEVSNDEMASTLKLMRNAI 588
            S +AAL +RI+QLEADN SLASAAEQAA LAEEYAADAARYRHSQN+TEQRLHDEIS                              XXXXXXXX                   Q+E ++Q     + DASFLL  +RA++   PL +L  YFP  + +  D +AY++F+RA+S + ++ Y Q H    +P  +Q++S + + F+QN+L +  +L+ +MQ+ L WCFE A+++P RA KLYEA  TLEQR +NVF QL EMQQQ   TS T  Y TMNT+LL MAMD V+D++PSS +    +    +L  ++  G ++RAR VRE L+  +R   +S++L+ KLN ARTKLRQRE E++D+KVRL+VY+DR+  AREDAKL+E+LK Q+S+ E+++  +  R  P+E V  + +ANS+T       ++DN      +A  S  +      +ATPL+Q+ +V++ IH+RRQLL+T L ++Q DT T R  +   +   M  + D +S AL++ R AAA+AS+V L  +TL VK  G +MS+K +LQA+A +    + +KQW+  R R+ +   +++ V+ +E+ +T+  +R+ +
Sbjct:    3 SSIAALQTRIRQLEADNQSLASAAEQAAALAEEYAADAARYRHSQNNTEQRLHDEISDASRRKDRRIQRLNTLLAEEKEHNQTLHNRXXXXXXXXXXXXXXXXXXXXXXXXXXFQLEQAAQHPSQFIADASFLLRGLRAEHLLTPLNILEQYFPDAEAIVSDFKAYRMFVRAYSTYNLSVYLQSH----IPTLRQNASEAHKRFMQNSLQVIERLSCLMQNTLRWCFESANELPQRAHKLYEAVTTLEQRTSNVFVQLCEMQQQPSLTS-TQAYATMNTDLLGMAMDVVSDIVPSSQLVQEMQSP--NLCDMVCAGGDDRARSVREKLLATTRANASSEELQSKLNVARTKLRQREGEVEDLKVRLNVYDDRLASAREDAKLIESLKQQLSEAEQQLTLSKRRQMPTEQVEDVGDANSITQPHNLPHESDNNDGENQRAKASRGTAGKSVLVATPLSQVHKVEETIHLRRQLLQTQLCELQ-DTCTKRTEEDNAEWQGMKQMHDAISQALHNARVAAADASIVKLDAETLRVKSGGVTMSRKAILQAVAYT-GEGNAVKQWQKARCRIGERSKMRLRVAEEELKATVSALRSKL 587          
The following BLAST results are available for this feature:
BLAST of Ggra9498.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J5S03.940e-12642.93Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 339..404
NoneNo IPR availableCOILSCoilCoilcoord: 6..26
NoneNo IPR availableCOILSCoilCoilcoord: 70..97
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 415..442
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000873_piloncontigtig00000873_pilon:291495..293267 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9498.t1Ggra9498.t1Gracilaria gracilis GNS1m malemRNAtig00000873_pilon 291495..293267 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9498.t1 ID=Ggra9498.t1|Name=Ggra9498.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=591bp
MSASHLAALHSRIQQLEADNASLASAAEQAAVLAEEYAADAARYRHSQNH
TEQRLHDEISDASRRKDRRIHRLNALLSEEKDRVQQLEQRVEQLGQLYDV
STQMEATLQASVSALQQQMEDSSQSVRPVGDASFLLHTIRAQYAAVPLEL
LNSYFPQPDPLAGDIRAYQLFLRAHSIHTIATYTQQHTLNPVPDPQQSSS
SQQTFVQNALHLFGKLAWVMQDLLAWCFEKADDMPHRAVKLYEATLTLEQ
RAANVFEQLFEMQQQRISTSCTPEYGTMNTELLEMAMDAVTDLLPSSSIS
ASSRGKETDLSALIQQGAEERARIVREGLINASRNAEASDQLEGKLNAAR
TKLRQRESELDDMKVRLSVYEDRMTKAREDAKLVETLKTQVSKLEEEVAE
ATIRDTPSESVRTIAEANSMTSQGKHTSQADNETSSTDQAIHSSKSCIAT
PLAQLQQVQDVIHVRRQLLRTYLSDIQSDTSTSRQPRVDLHSMLHVRDTL
SHALNDLRTAAANASVVTLHTDTLSVKRSGKSMSQKILLQAMAASCSNED
TLKQWRIERERVCDSKTVKIEVSNDEMASTLKLMRNAISL*
back to top