Ggra9489.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9489.t1
Unique NameGgra9489.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length248
Homology
BLAST of Ggra9489.t1 vs. uniprot
Match: A0A2V3J6H3 (WD repeat-containing protein 44 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6H3_9FLOR)

HSP 1 Score: 443 bits (1140), Expect = 1.660e-152
Identity = 217/247 (87.85%), Postives = 229/247 (92.71%), Query Frame = 0
Query:    1 MANGIVTMWHLKERKVLCKAETDDLITACAITPDGTTALVGTNNGRCKFYGLFDEIQGEWQFKHTTQLDVRSRRAKNAQGKKICGFRFYGKSDKVIVSSNDSRLRLYRLDDKSILTKFLGHQNNHSRLTASFAPGGRYVLCGSEGRMVYIWEVDYSLYRVPQAVGRTMKKPVHEDESSTQQRKDGGGNAYEYFVAQEGGELTAAVFAPKMVPERALSVRGALSKSVTSGLVIVTASDDGVLRVFGCC 247
            MANGIVTMWHLKERK+L KAETDDLITACAITPDGTTALVGT +GRCKFYGLFDEIQGEWQFKHTTQLDVRSRRAKNAQGKKICGFRFYGKSDKV+VSSNDSRLRLYRLDDKS+LTKF+GH N+ SR  ASFAPGGRYVLCGSE RMVYIWEVDYSLYRVP AVG+TMKKPVHEDE+S Q+RKD  GN+YE FVAQ+ GE+TAAVFAPKMVPERALS R A SKSVTSGLVIVTA DDG LRVFGCC
Sbjct:  275 MANGIVTMWHLKERKILSKAETDDLITACAITPDGTTALVGTAHGRCKFYGLFDEIQGEWQFKHTTQLDVRSRRAKNAQGKKICGFRFYGKSDKVVVSSNDSRLRLYRLDDKSVLTKFVGHLNSESRHKASFAPGGRYVLCGSESRMVYIWEVDYSLYRVPPAVGQTMKKPVHEDETSLQKRKD-AGNSYESFVAQDSGEVTAAVFAPKMVPERALSARSAFSKSVTSGLVIVTAGDDGFLRVFGCC 520          
BLAST of Ggra9489.t1 vs. uniprot
Match: R7QUN1 (WD repeat-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QUN1_CHOCR)

HSP 1 Score: 223 bits (569), Expect = 3.260e-63
Identity = 108/129 (83.72%), Postives = 113/129 (87.60%), Query Frame = 0
Query:   31 ITPDGTTALVGTNNGRCKFYGLFDEIQGEWQFKHTTQLDVRSRRAKNAQGKKICGFRFYGKSDKVIVSSNDSRLRLYRLDDKSILTKFLGHQNNHSRLTASFAPGGRYVLCGSEGRMVYIWEVDYSLYR 159
            ITPDGTTAL+GT  GRCKFY LFDEIQGEWQFKHTTQLDVRSRRAKNA GKKICGFRF GKSDKV++SSNDSRLRLYRLDDKS+L+KFLGHQN  SR  ASFAPG RYVL G E R VYIWEVD SL R
Sbjct: 1443 ITPDGTTALLGTYRGRCKFYALFDEIQGEWQFKHTTQLDVRSRRAKNALGKKICGFRFMGKSDKVMISSNDSRLRLYRLDDKSVLSKFLGHQNAESRFNASFAPGQRYVLSGGESRSVYIWEVDDSLKR 1571          
BLAST of Ggra9489.t1 vs. uniprot
Match: M2WZ21 (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WZ21_GALSU)

HSP 1 Score: 142 bits (357), Expect = 1.860e-35
Identity = 69/145 (47.59%), Postives = 97/145 (66.90%), Query Frame = 0
Query:    8 MWHLKERKVLCKAETDDLITACAITPDGTTALVGTNNGRCKFYGLFDEIQGEWQFKHTTQLDVRSRRAKNAQGKKICGFRFYGKSDKVIVSSNDSRLRLYRLDDKSILTKFLGHQNNHSRLTASFAPGGRYVLCGSEGRMVYIWE 152
            +W+  ++ VL   ET D+ITACAI+ DG  ALVG+  G+CK Y L +E +G+W  ++ TQ DVRSRR KN++G KI G  F    ++ ++SSNDSR+R YRLDD S   K++GH N  S++  +F   G +V+ GSE + VYIW 
Sbjct:  258 LWNAIDKTVLSWTETPDVITACAISEDGKQALVGSYRGQCKVYYLKNE-KGDWCIQYITQFDVRSRRGKNSRGSKISGICFSPNGEEFLISSNDSRMRCYRLDDFSRSCKYIGHHNQSSQIYGTFHKNGSFVISGSEDKAVYIWR 401          
BLAST of Ggra9489.t1 vs. uniprot
Match: A0A016SI50 (WD repeat-containing protein 44 n=1 Tax=Ancylostoma ceylanicum TaxID=53326 RepID=A0A016SI50_9BILA)

HSP 1 Score: 137 bits (344), Expect = 3.900e-34
Identity = 91/246 (36.99%), Postives = 134/246 (54.47%), Query Frame = 0
Query:    3 NGIVTMWHLKERKVLCKAETD-DLITACAITPDGTTALVGTNNGRCKFYGLFDEIQGEWQFKHTTQLDVRSRRAKNAQGKKICGFRFYGKSDKVIVSSNDSRLRLYRLDDKSILTKFLGHQNNHSRLTASFAPGGRYVLCGSEGRMVYIWEVDYSLYRVPQAVGRTMKKPVHEDESSTQQRKDGGGNAYEYFVAQEGGELTAAVFAPKMVPERALSVRGALS----KSVTSGLVIVTASDDGVLRV 243
            +G + MWH+ ++KV    E     ITA     +G  A+VGT NGRC FY          Q K+ T +DVRS R +NA+G KI G   +G  DK++V+SNDSR+R+Y + DK++  KF G QN HS++ A+F+P G++++CGSE + +Y+W              RT   P     S+   RKD   N +E  V      ++ AVFAPK  P+  LS+   L     ++   G VIV+A   G +++
Sbjct:  223 DGKLRMWHIPDKKVAVWNEVPVKFITAITFVKNGKFAVVGTYNGRCFFYSTD-------QLKYHTVVDVRSTRGRNAKGHKITGLAVHG--DKLLVTSNDSRIRMYDVRDKALTCKFRGAQNEHSQIRAAFSPDGKHIVCGSEDKFIYLW--------------RTADLP-----STLSVRKD-RNNMWER-VRAHSAAVSVAVFAPK--PQVFLSMMAKLEDNNRETGCGGHVIVSADLQGCIKI 436          
BLAST of Ggra9489.t1 vs. uniprot
Match: A0A183G0H3 (WD repeat-containing protein 44 n=2 Tax=Heligmosomoides polygyrus TaxID=6339 RepID=A0A183G0H3_HELPZ)

HSP 1 Score: 137 bits (344), Expect = 3.000e-33
Identity = 90/255 (35.29%), Postives = 132/255 (51.76%), Query Frame = 0
Query:    3 NGIVTMWHLKERKVLCKAETDDLITACAITPDGTTALVGTNNGRCKFYGLFDEIQGEWQFKHTTQLDVRSRRAKNAQGKKICGFRFYGKSDKVIVSSNDSRLRLYRLDDKSILTKFLGHQNNHSRLTASFAPGGRYVLCGSEGRMVYIWEVDYSLYRVPQAVGRTMKKPVHEDESSTQQRKDGGGNAYEYFVAQEGGELTAAVFAPK--------------MVPERALSVRGALSKSVTSGLVIVTASDDGVLRV 243
            +G + MWH+ ++KV    E    ITA     +G  A+VGT NGRC FY          Q K+ T +DVRS R KNA+G K+ G   +G  DK++V+SNDSR+R+Y + DK++  KF G QN HS++ A+F+P GR+++CGSE + +Y+W              RT   P     S+   RKD   NA    V      ++ AVFAPK                 ++   +    S+ V +G VIV+A   G +++
Sbjct:  458 DGKLRMWHIPDKKVAVWNEVK-FITAITFVKNGKFAVVGTYNGRCFFYSTD-------QLKYHTVVDVRSSRGKNARGHKVTGLAVHG--DKLLVTSNDSRIRMYDVRDKALTCKFRGAQNEHSQIRAAFSPDGRHIVCGSEDKFIYLW--------------RTSDLP-----STLSVRKD--RNAMWERVRAHSAPVSVAVFAPKPQVRFDCCFSCLRVFTIQKEGRISPQTSQHVVNGHVIVSADLQGCIKI 681          
BLAST of Ggra9489.t1 vs. uniprot
Match: A0A158QQR0 (WD repeat-containing protein 44 n=2 Tax=Haemonchus placei TaxID=6290 RepID=A0A158QQR0_HAEPC)

HSP 1 Score: 136 bits (342), Expect = 7.310e-33
Identity = 91/254 (35.83%), Postives = 133/254 (52.36%), Query Frame = 0
Query:    3 NGIVTMWHLKERKVLCKAETDDLITACAITPDGTTALVGTNNGRCKFYGLFDEIQGEWQFKHTTQLDVRSRRAKNAQGKKICGFRFYGKSDKVIVSSNDSRLRLYRLDDKSILTKFLGHQNNHSRLTASFAPGGRYVLCGSEGRMVYIWEVDYSLYRVPQAVGRTMKKPVHEDESSTQQRKDGGGNAYEYFVAQEGGELTAAVFAPKMVPERALSVRGALSKS-------------VTSGLVIVTASDDGVLRV 243
            +G + MWH+ ++KV    E    ITA     +G  A+VGT NGRC FY          Q K+ T +DVRS R KNA+G K+ G   +G  DK++V+SNDSR+R+Y + DK++  KF G QN HS++ A+F+P GR+++CGSE + +Y+W              RT   P     S+   RKD   NA    V      ++ AVFAPK  P+  LS+     +              + +G VIV+A   G +++
Sbjct:  655 DGKLRMWHIPDKKVAVWNEVK-FITAITFVKNGKFAVVGTYNGRCFFYSTD-------QLKYHTVVDVRSSRGKNARGHKVTGLAVHG--DKLLVTSNDSRIRMYDVRDKALTCKFRGAQNEHSQIRAAFSPDGRHIVCGSEDKFIYLW--------------RTSDLP-----STLSVRKD--RNAMWERVRAHSAPVSVAVFAPK--PQVFLSMMAKQDEENRDSNSFPGTCPHIITGHVIVSADLQGSIKI 875          
BLAST of Ggra9489.t1 vs. uniprot
Match: A0A4U5MQA1 (WD repeat-containing protein 44 n=1 Tax=Steinernema carpocapsae TaxID=34508 RepID=A0A4U5MQA1_STECR)

HSP 1 Score: 136 bits (342), Expect = 7.690e-33
Identity = 83/210 (39.52%), Postives = 117/210 (55.71%), Query Frame = 0
Query:    3 NGIVTMWHLKERKVLCKAETDDL--ITACAITPDGTTALVGTNNGRCKFYGLFDEIQGEWQFKHTTQLDVRSRRAKNAQG-KKICGFRFYGKSDKVIVSSNDSRLRLYRLDDKSILTKFLGHQNNHSRLTASFAPGGRYVLCGSEGRMVYIWEVDYSLYRVPQAVGRTMKKPVHEDESSTQQRKDGGGNAYEYFVAQEGGELTAAVFAPK 209
            +G + MWH+ ++KV    E + +  ITA     +G  A VGT NGRC FY          Q K+ T +DVRS R KN++G  KI G   +G  DK++V+SNDSR+R+Y L D  I+ KF G QN HS++ ASF+P GR+V+CGSE R +Y+W+                     ++++    RKD   NA    V   G  ++AA+FAPK
Sbjct:  801 DGKLRMWHIPDKKVALWNEVEGVKFITAITFVKNGKFAAVGTYNGRCYFYTTD-------QLKYHTVIDVRSSRGKNSKGGNKITGLAVHG--DKLLVTSNDSRIRMYDLRDMDIICKFKGVQNEHSQIRASFSPDGRHVICGSEDRYIYLWKTS-------------------DNQTGLSMRKD--RNALWERVRGHGSIVSAAIFAPK 980          
BLAST of Ggra9489.t1 vs. uniprot
Match: A0A0B1SCM0 (WD repeat-containing protein 44 (Fragment) n=1 Tax=Oesophagostomum dentatum TaxID=61180 RepID=A0A0B1SCM0_OESDE)

HSP 1 Score: 126 bits (317), Expect = 8.630e-33
Identity = 79/203 (38.92%), Postives = 111/203 (54.68%), Query Frame = 0
Query:    8 MWHLKERKVLCKAETD-DLITACAITPDGTTALVGTNNGRCKFYGLFDEIQGEWQFKHTTQLDVRSRRAKNAQGKKICGFRFYGKSDKVIVSSNDSRLRLYRLDDKSILTKFLGHQNNHSRLTASFAPGGRYVLCGSEGRMVYIWEVDYSLYRVPQAVGRTMKKPVHEDESSTQQRKDGGGNAYEYFVAQEGGELTAAVFAPK 209
            MWH+ ++KV    E     ITA     +G  A+VGT NGRC FY          Q K+ T +DVRS R +NA+G KI G   +G  DK++V+SNDSR+R+Y + DK++  KF G QN  S++ A+F+P G++++CGSE + +Y+W              RT   P     S+   RKD   NA    V      ++ AVFAPK
Sbjct:    1 MWHIPDKKVAVWNEVPVKFITALTFVKNGKFAVVGTYNGRCFFYTTD-------QLKYHTVVDVRSTRGRNAKGHKITGLAVHG--DKLLVTSNDSRIRMYDVRDKALTCKFRGAQNERSQIRAAFSPDGKHIVCGSEDKFIYLW--------------RTADLP-----STLSVRKD--RNAMWERVRAHSAPVSVAVFAPK 173          
BLAST of Ggra9489.t1 vs. uniprot
Match: A0A7I4Z138 (WD repeat-containing protein 44 n=2 Tax=Haemonchidae TaxID=126387 RepID=A0A7I4Z138_HAECO)

HSP 1 Score: 135 bits (341), Expect = 1.030e-32
Identity = 91/255 (35.69%), Postives = 133/255 (52.16%), Query Frame = 0
Query:    3 NGIVTMWHLKERKVLCKAETD-DLITACAITPDGTTALVGTNNGRCKFYGLFDEIQGEWQFKHTTQLDVRSRRAKNAQGKKICGFRFYGKSDKVIVSSNDSRLRLYRLDDKSILTKFLGHQNNHSRLTASFAPGGRYVLCGSEGRMVYIWEVDYSLYRVPQAVGRTMKKPVHEDESSTQQRKDGGGNAYEYFVAQEGGELTAAVFAPKMVPERALSVRGALSKS-------------VTSGLVIVTASDDGVLRV 243
            +G + MWH+ ++KV    E     ITA     +G  A+VGT NGRC FY          Q K+ T +DVRS R KNA+G K+ G   +G  DK++V+SNDSR+R+Y + DK++  KF G QN HS++ A+F+P GR+++CGSE + +Y+W              RT   P     S+   RKD   NA    V      ++ AVFAPK  P+  LS+     +              + +G VIV+A   G +++
Sbjct:  757 DGKLRMWHIPDKKVAVWNEVPVKFITAITFVKNGKFAVVGTYNGRCFFYSTD-------QLKYHTVVDVRSSRGKNARGHKVTGLAVHG--DKLLVTSNDSRIRMYDVRDKALTCKFRGAQNEHSQIRAAFSPDGRHIVCGSEDKFIYLW--------------RTSDLP-----STLSVRKD--RNAMWERVRAHSAPVSVAVFAPK--PQVFLSMMAKQDEENRDSNSFPGTCPHIITGHVIVSADLQGSIKI 979          
BLAST of Ggra9489.t1 vs. uniprot
Match: A0A1I7Z6G0 (WD repeat-containing protein 44 n=1 Tax=Steinernema glaseri TaxID=37863 RepID=A0A1I7Z6G0_9BILA)

HSP 1 Score: 134 bits (338), Expect = 2.630e-32
Identity = 73/157 (46.50%), Postives = 99/157 (63.06%), Query Frame = 0
Query:    3 NGIVTMWHLKERKVLCKAETDDL--ITACAITPDGTTALVGTNNGRCKFYGLFDEIQGEWQFKHTTQLDVRSRRAKNAQG-KKICGFRFYGKSDKVIVSSNDSRLRLYRLDDKSILTKFLGHQNNHSRLTASFAPGGRYVLCGSEGRMVYIWEVDYS 156
            +G + MWH+ ++KV    E + +  ITA A   +G  A VGT NGRC FY          Q K+ T +DVRS R KNA+G  KI G   +G  DK++V+SNDSR+R+Y L D  I+ KF G QN HS++ ASF+P GR+V+CGSE R +Y+W+   S
Sbjct:  817 DGKLRMWHIPDKKVALWNEVEGVKFITAIAFVKNGRFAAVGTYNGRCYFYSTD-------QLKYHTVIDVRSSRGKNARGGNKITGLAVHG--DKLLVTSNDSRIRMYDLRDMDIICKFKGVQNEHSQIRASFSPDGRHVICGSEDRYIYLWKTSDS 964          
The following BLAST results are available for this feature:
BLAST of Ggra9489.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J6H31.660e-15287.85WD repeat-containing protein 44 n=1 Tax=Gracilario... [more]
R7QUN13.260e-6383.72WD repeat-containing protein n=1 Tax=Chondrus cris... [more]
M2WZ211.860e-3547.59Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A016SI503.900e-3436.99WD repeat-containing protein 44 n=1 Tax=Ancylostom... [more]
A0A183G0H33.000e-3335.29WD repeat-containing protein 44 n=2 Tax=Heligmosom... [more]
A0A158QQR07.310e-3335.83WD repeat-containing protein 44 n=2 Tax=Haemonchus... [more]
A0A4U5MQA17.690e-3339.52WD repeat-containing protein 44 n=1 Tax=Steinernem... [more]
A0A0B1SCM08.630e-3338.92WD repeat-containing protein 44 (Fragment) n=1 Tax... [more]
A0A7I4Z1381.030e-3235.69WD repeat-containing protein 44 n=2 Tax=Haemonchid... [more]
A0A1I7Z6G02.630e-3246.50WD repeat-containing protein 44 n=1 Tax=Steinernem... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 69..108
e-value: 76.0
score: 5.1
coord: 111..152
e-value: 0.56
score: 18.6
coord: 13..51
e-value: 7.0
score: 11.7
coord: 209..245
e-value: 450.0
score: 0.3
IPR001680WD40 repeatPFAMPF00400WD40coord: 116..151
e-value: 0.17
score: 12.8
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..178
e-value: 1.1E-21
score: 79.1
NoneNo IPR availablePANTHERPTHR14221:SF0WD REPEAT-CONTAINING PROTEIN 44coord: 4..244
IPR040324WD repeat-containing protein WDR44/Dgr2PANTHERPTHR14221WD REPEAT DOMAIN 44coord: 4..244
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 3..244

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000873_piloncontigtig00000873_pilon:167878..168621 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9489.t1Ggra9489.t1Gracilaria gracilis GNS1m malemRNAtig00000873_pilon 167878..168621 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9489.t1 ID=Ggra9489.t1|Name=Ggra9489.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=248bp
MANGIVTMWHLKERKVLCKAETDDLITACAITPDGTTALVGTNNGRCKFY
GLFDEIQGEWQFKHTTQLDVRSRRAKNAQGKKICGFRFYGKSDKVIVSSN
DSRLRLYRLDDKSILTKFLGHQNNHSRLTASFAPGGRYVLCGSEGRMVYI
WEVDYSLYRVPQAVGRTMKKPVHEDESSTQQRKDGGGNAYEYFVAQEGGE
LTAAVFAPKMVPERALSVRGALSKSVTSGLVIVTASDDGVLRVFGCC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR040324WDR44/Dgr2
IPR036322WD40_repeat_dom_sf