Ggra948.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra948.t1
Unique NameGgra948.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length558
Homology
BLAST of Ggra948.t1 vs. uniprot
Match: A0A2V3IXX8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXX8_9FLOR)

HSP 1 Score: 709 bits (1831), Expect = 1.330e-251
Identity = 363/557 (65.17%), Postives = 447/557 (80.25%), Query Frame = 0
Query:    1 MSSRLSLHDCTISIRIP-TPPTPLPDSPEQIALQSLSSKRDQTEAYIGETIFLLLTLAPKEAT-ASSESLRRTIDTCDDPYVYIGSLPHAASNEKPSCRLPVMRETAWLPSKQDGSPVVCKGLWVLVRSPPQTSELSRALAMAGRQNIVLSLREMTVPNMRNSSVWATIDRASRLFGKTVALYATRHILLSMPIEITCQCLTVSGSLDKALVSVTARNSTSDAFIAVVPPYINVSSSRVVQEGADVNSHGRSAALDGQYEFVLMTDEESDDDSTLSSMQAEQDLLLSKQASDSSCEDYGLFIPSFNHLIRHAARLGPREVYNFVYRIVEKGAAESSQSDPQDRDNKLLRPTPKPPRLTMNQCIQTSVAVAWNCSPEQEENLVVYANETVSRQMSAGGVLAAGKRSTVAVHITSINWRPSALLKSIVVSFSGPERVVVGSRINVSISVLNQTDRHLHNAKVKVQQDGERYELLALRTVVVVGDIMAGCETSLQVPCIALNSGTLSFGKVCVVDERGLVWTSESVFRTVVESEEVPRLGVDDKTTETASSIPASATVSV 555
            MSSRLSLHDCT+S+R+  T    L D PEQ+ALQ+L++ RD+TEAYIGETIFLL TL P +A   SSE+L+R I + DDP+VYIG+LPHAAS EKPS RLP++RETAW+P++ DG  ++C+G+W LVRSPPQ S  SRALAMAGRQN+VLSLRE  VPN++NSSVWATIDRASRLFGK+VALYATR++LLSMPIEI+CQC++V  SLDK L++VTARNST DA+++VVPPYINVSSSR+V+  +  NSHGRS  LD  YEFVL+TD+ESDDDSTL+++   +D+ LSKQ S+ +CEDYGLFIPSFNHLIRHAA LGPREVYNFVYRI+EK A  +SQ + QDR++K   P  K  +L+  QC+QTSVAVAWNCSP  + NL VY++E  +R+MSAGGVLAAGKRSTVAVH+TSINWRP+ LLKS++VS SGP   V+G+RI +SI V+NQTD  L N +VK+QQD   Y LLALRTVVVVGDI+AG E+SLQVPC+A+ +GTL  GKV +VDE G+VW S+S FR +V   E     VD  T   A     ++TV+V
Sbjct:    1 MSSRLSLHDCTLSVRVASTASITLSDPPEQVALQALANPRDKTEAYIGETIFLLATLTPPDAANTSSETLQRAIQSYDDPHVYIGALPHAASLEKPSSRLPILRETAWIPARHDGGHLLCRGMWALVRSPPQPSHASRALAMAGRQNLVLSLRERDVPNLKNSSVWATIDRASRLFGKSVALYATRYVLLSMPIEISCQCVSVENSLDKTLINVTARNSTGDAYLSVVPPYINVSSSRIVKLSSAENSHGRSVLLDNLYEFVLLTDDESDDDSTLTNLYNNRDMTLSKQPSEQACEDYGLFIPSFNHLIRHAATLGPREVYNFVYRIIEKRAHGASQGESQDREDKSQFPPWKAYKLSAEQCVQTSVAVAWNCSPRDDSNLSVYSSEAFTREMSAGGVLAAGKRSTVAVHVTSINWRPAVLLKSLLVSISGPAAAVLGNRICISIRVVNQTDSDLRNVRVKLQQDDRLYGLLALRTVVVVGDILAGGESSLQVPCVAIGTGTLGVGKVQIVDENGVVWISDSEFRVIVLDREDEEDEVDGVTESDALDRVDTSTVTV 557          
BLAST of Ggra948.t1 vs. uniprot
Match: R7QMV3 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMV3_CHOCR)

HSP 1 Score: 204 bits (518), Expect = 1.900e-57
Identity = 124/288 (43.06%), Postives = 178/288 (61.81%), Query Frame = 0
Query:  264 DEESDDDSTLSSMQAEQDLLLSKQASDSSCEDYGLFIPSFNHLIRHAARLGPREVYNFVYRIVEKG-------------AAESSQSDPQDRDNKLLRPTPKPPRLTMNQCIQTSVAVAWNCSPEQEENLVVYAN------ETVSRQMSAGGVLAAGKRSTVAVHITSINWRPSALLKSIVVSFSGPERVVVGSRINVSISVLNQTDRHLHNAKVKVQQDGE-RYELLALRTVVVVGDIMAGCETSLQVPCIALNSGTLSFGKVCVVD-----ERGLVWTSESVFRTVV 526
            D++ D  + LSS  A Q L     A+ +S +DYGLFIPSFNH  + A  LGPREV+NFVY++V+KG             AA+ ++S P++   KL   T          C++TSVAVAWNC P+    +   A+      E   R++S+GGVLA G+R  VAV  T ++WRP AL++ ++V+FSGP    VG R++VS+++LNQT   L +A V VQQ+ + + +LLALRTV+VVG I +G ET++Q+PCIA  +G+LS G V ++D     E   VWTS++ +   V
Sbjct:   10 DDDDDLSAELSSYNAAQ-LWRGDSATTNSGDDYGLFIPSFNHRQQRAVPLGPREVFNFVYKVVQKGRNAAEPALLHKEAAAKENRSQPEETAFKLKHGT----------CLETSVAVAWNCVPKLSAIVAAPADADADADEAFHRELSSGGVLATGRRGNVAVRWTCVHWRPPALIEDVLVAFSGPPVCNVGDRLSVSVTILNQTADDLVSAAVCVQQEEDAQMDLLALRTVLVVGHIASGQETTVQIPCIAFRAGSLSLGPVQIMDRGNPEENRTVWTSQAAYAVFV 286          
The following BLAST results are available for this feature:
BLAST of Ggra948.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IXX81.330e-25165.17Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QMV31.900e-5743.06Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 334..348
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 332..353

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000049_piloncontigtig00000049_pilon:907881..909554 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra948.t1Ggra948.t1Gracilaria gracilis GNS1m malemRNAtig00000049_pilon 907881..909554 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra948.t1 ID=Ggra948.t1|Name=Ggra948.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=558bp
MSSRLSLHDCTISIRIPTPPTPLPDSPEQIALQSLSSKRDQTEAYIGETI
FLLLTLAPKEATASSESLRRTIDTCDDPYVYIGSLPHAASNEKPSCRLPV
MRETAWLPSKQDGSPVVCKGLWVLVRSPPQTSELSRALAMAGRQNIVLSL
REMTVPNMRNSSVWATIDRASRLFGKTVALYATRHILLSMPIEITCQCLT
VSGSLDKALVSVTARNSTSDAFIAVVPPYINVSSSRVVQEGADVNSHGRS
AALDGQYEFVLMTDEESDDDSTLSSMQAEQDLLLSKQASDSSCEDYGLFI
PSFNHLIRHAARLGPREVYNFVYRIVEKGAAESSQSDPQDRDNKLLRPTP
KPPRLTMNQCIQTSVAVAWNCSPEQEENLVVYANETVSRQMSAGGVLAAG
KRSTVAVHITSINWRPSALLKSIVVSFSGPERVVVGSRINVSISVLNQTD
RHLHNAKVKVQQDGERYELLALRTVVVVGDIMAGCETSLQVPCIALNSGT
LSFGKVCVVDERGLVWTSESVFRTVVESEEVPRLGVDDKTTETASSIPAS
ATVSVGD*
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